RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 DHX57Q6P158 1386 aaKnown RBP18.97■□□□□ 0.63
SSR4-211ENST00000486204 EP400Q96L91 3159 aa18.97■□□□□ 0.63
SSR4-211ENST00000486204 ATRNO75882 1429 aa18.97■□□□□ 0.63
SSR4-211ENST00000486204 ZNF326Q5BKZ1 582 aaKnown RBP18.96■□□□□ 0.63
SSR4-211ENST00000486204 XRN1Q8IZH2 1706 aaKnown RBP18.94■□□□□ 0.62
SSR4-211ENST00000486204 PTCH1Q13635 1447 aa18.94■□□□□ 0.62
SSR4-211ENST00000486204 SOS2Q07890 1332 aaPredicted RBP18.93■□□□□ 0.62
SSR4-211ENST00000486204 RPGRIP1LQ68CZ1 1315 aa18.93■□□□□ 0.62
SSR4-211ENST00000486204 MYOM2P54296 1465 aa18.92■□□□□ 0.62
SSR4-211ENST00000486204 ADGRL3Q9HAR2 1447 aa18.91■□□□□ 0.62
SSR4-211ENST00000486204 LAMC1P11047 1609 aa18.91■□□□□ 0.62
SSR4-211ENST00000486204 C1orf167Q5SNV9 1468 aa18.9■□□□□ 0.62
SSR4-211ENST00000486204 NRXN1Q9ULB1 1477 aa18.9■□□□□ 0.62
SSR4-211ENST00000486204 GJD4Q96KN9 370 aaPredicted RBP18.9■□□□□ 0.62
SSR4-211ENST00000486204 METP08581 1390 aa18.9■□□□□ 0.62
SSR4-211ENST00000486204 BLMP54132 1417 aaPredicted RBP18.9■□□□□ 0.62
SSR4-211ENST00000486204 DEFB132Q7Z7B7 95 aa18.89■□□□□ 0.61
SSR4-211ENST00000486204 ORAI2Q96SN7 254 aa18.89■□□□□ 0.61
SSR4-211ENST00000486204 PCGF6Q9BYE7 350 aa18.89■□□□□ 0.61
SSR4-211ENST00000486204 RGL3Q3MIN7 710 aa18.88■□□□□ 0.61
SSR4-211ENST00000486204 BCL9LQ86UU0 1499 aa18.88■□□□□ 0.61
SSR4-211ENST00000486204 PIK3C2GO75747 1445 aa18.87■□□□□ 0.61
SSR4-211ENST00000486204 KNDC1Q76NI1 1749 aa18.86■□□□□ 0.61
SSR4-211ENST00000486204 VGFO15240 615 aaPredicted RBP18.86■□□□□ 0.61
SSR4-211ENST00000486204 SF3B2Q13435 895 aaKnown RBP18.86■□□□□ 0.61
SSR4-211ENST00000486204 ADGRF5Q8IZF2 1346 aa18.85■□□□□ 0.61
SSR4-211ENST00000486204 LRP5O75197 1615 aa18.83■□□□□ 0.61
SSR4-211ENST00000486204 NALCNQ8IZF0 1738 aa18.83■□□□□ 0.6
SSR4-211ENST00000486204 KIAA1210Q9ULL0 1709 aa18.83■□□□□ 0.6
SSR4-211ENST00000486204 PRAG1Q86YV5 1406 aa18.81■□□□□ 0.6
SSR4-211ENST00000486204 COL22A1Q8NFW1 1626 aaPredicted RBP18.81■□□□□ 0.6
SSR4-211ENST00000486204 PSDA5PKW4 1024 aaPredicted RBP18.79■□□□□ 0.6
SSR4-211ENST00000486204 UNC5CLQ8IV45 518 aa18.79■□□□□ 0.6
SSR4-211ENST00000486204 SIN3AQ96ST3 1273 aa18.79■□□□□ 0.6
SSR4-211ENST00000486204 ADGRB1O14514 1584 aa18.77■□□□□ 0.6
SSR4-211ENST00000486204 RALGAPBQ86X10 1494 aa18.77■□□□□ 0.59
SSR4-211ENST00000486204 NPHP3Q7Z494 1330 aa18.76■□□□□ 0.59
SSR4-211ENST00000486204 ESCO1Q5FWF5 840 aa18.75■□□□□ 0.59
SSR4-211ENST00000486204 SEPT12Q8IYM1 358 aa18.75■□□□□ 0.59
SSR4-211ENST00000486204 TRPM1Q7Z4N2 1603 aa18.74■□□□□ 0.59
SSR4-211ENST00000486204 DCAF11Q8TEB1 546 aa18.74■□□□□ 0.59
SSR4-211ENST00000486204 GLI3P10071 1580 aa18.73■□□□□ 0.59
SSR4-211ENST00000486204 ROBO2Q9HCK4 1378 aa18.73■□□□□ 0.59
SSR4-211ENST00000486204 XPCQ01831 940 aaPredicted RBP18.73■□□□□ 0.59
SSR4-211ENST00000486204 ARHGEF28Q8N1W1 1705 aaKnown RBP18.73■□□□□ 0.59
SSR4-211ENST00000486204 TECPR2O15040 1411 aa18.73■□□□□ 0.59
SSR4-211ENST00000486204 FOXO3O43524 673 aa18.72■□□□□ 0.59
SSR4-211ENST00000486204 MARF1Q9Y4F3 1742 aaKnown RBP18.71■□□□□ 0.59
SSR4-211ENST00000486204 BAG6P46379 1132 aa18.71■□□□□ 0.59
SSR4-211ENST00000486204 STAC3Q96MF2 364 aa18.71■□□□□ 0.59
SSR4-211ENST00000486204 C14orf93Q9H972 538 aaKnown RBP18.71■□□□□ 0.59
SSR4-211ENST00000486204 SLIT2O94813 1529 aa18.7■□□□□ 0.58
SSR4-211ENST00000486204 KRT27Q7Z3Y8 459 aa18.7■□□□□ 0.58
SSR4-211ENST00000486204 KDM2AQ9Y2K7 1162 aa18.7■□□□□ 0.58
SSR4-211ENST00000486204 PXDNQ92626 1479 aa18.7■□□□□ 0.58
SSR4-211ENST00000486204 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.69■□□□□ 0.58
SSR4-211ENST00000486204 YTHDC2Q9H6S0 1430 aaKnown RBP18.69■□□□□ 0.58
SSR4-211ENST00000486204 NEUROD1Q13562 356 aa18.69■□□□□ 0.58
SSR4-211ENST00000486204 CFAP70Q5T0N1 1121 aa18.69■□□□□ 0.58
SSR4-211ENST00000486204 BRWD3Q6RI45 1802 aa18.69■□□□□ 0.58
SSR4-211ENST00000486204 LRPPRCP42704 1394 aaKnown RBP18.68■□□□□ 0.58
SSR4-211ENST00000486204 L3MBTL2Q969R5 705 aa18.68■□□□□ 0.58
SSR4-211ENST00000486204 ONECUT3O60422 494 aaPredicted RBP18.67■□□□□ 0.58
SSR4-211ENST00000486204 VPS72Q15906 364 aa18.67■□□□□ 0.58
SSR4-211ENST00000486204 DLC1Q96QB1 1528 aa18.67■□□□□ 0.58
SSR4-211ENST00000486204 YY1P25490 414 aa18.66■□□□□ 0.58
SSR4-211ENST00000486204 TMEM132EQ6IEE7 984 aa18.66■□□□□ 0.58
SSR4-211ENST00000486204 CCDC9Q9Y3X0 531 aaKnown RBP18.66■□□□□ 0.58
SSR4-211ENST00000486204 ABCC11Q96J66 1382 aa18.66■□□□□ 0.58
SSR4-211ENST00000486204 R3HDM1Q15032 1099 aaKnown RBP18.64■□□□□ 0.57
SSR4-211ENST00000486204 CDC42BPGQ6DT37 1551 aa18.64■□□□□ 0.57
SSR4-211ENST00000486204 EN1Q05925 392 aaPredicted RBP18.63■□□□□ 0.57
SSR4-211ENST00000486204 CLSPNQ9HAW4 1339 aa18.63■□□□□ 0.57
SSR4-211ENST00000486204 HAP1P54257 671 aaPredicted RBP18.62■□□□□ 0.57
SSR4-211ENST00000486204 SPATA31A3Q5VYP0 1347 aa18.62■□□□□ 0.57
SSR4-211ENST00000486204 FMN2Q9NZ56 1722 aa18.62■□□□□ 0.57
SSR4-211ENST00000486204 RGPD8O14715 1765 aaPredicted RBP18.61■□□□□ 0.57
SSR4-211ENST00000486204 TONSLQ96HA7 1378 aa18.61■□□□□ 0.57
SSR4-211ENST00000486204 A0A0G2JS52 829 aa18.61■□□□□ 0.57
SSR4-211ENST00000486204 NUTM2FA1L443 756 aa18.61■□□□□ 0.57
SSR4-211ENST00000486204 MYT1Q01538 1121 aa18.61■□□□□ 0.57
SSR4-211ENST00000486204 ADGRB2O60241 1585 aa18.6■□□□□ 0.57
SSR4-211ENST00000486204 PLEKHH1Q9ULM0 1364 aa18.59■□□□□ 0.57
SSR4-211ENST00000486204 STK26Q9P289 416 aa18.59■□□□□ 0.57
SSR4-211ENST00000486204 KRT28Q7Z3Y7 464 aa18.58■□□□□ 0.56
SSR4-211ENST00000486204 QRICH2Q9H0J4 1663 aa18.57■□□□□ 0.56
SSR4-211ENST00000486204 USP32Q8NFA0 1604 aa18.56■□□□□ 0.56
SSR4-211ENST00000486204 PLEKHG5O94827 1062 aa18.56■□□□□ 0.56
SSR4-211ENST00000486204 CABLES1Q8TDN4 633 aa18.56■□□□□ 0.56
SSR4-211ENST00000486204 SIRT1Q96EB6 747 aa18.56■□□□□ 0.56
SSR4-211ENST00000486204 FAM98CQ17RN3 349 aaKnown RBP18.55■□□□□ 0.56
SSR4-211ENST00000486204 NBPF1Q3BBV0 1214 aa18.55■□□□□ 0.56
SSR4-211ENST00000486204 NBPF8Q3BBV2 869 aa18.55■□□□□ 0.56
SSR4-211ENST00000486204 WAPLQ7Z5K2 1190 aa18.54■□□□□ 0.56
SSR4-211ENST00000486204 CCER1Q8TC90 406 aaPredicted RBP18.53■□□□□ 0.56
SSR4-211ENST00000486204 GPRASP1Q5JY77 1395 aa18.53■□□□□ 0.56
SSR4-211ENST00000486204 FAM83GA6ND36 823 aa18.52■□□□□ 0.56
SSR4-211ENST00000486204 EZH2Q15910 746 aaKnown RBP18.52■□□□□ 0.56
SSR4-211ENST00000486204 FAM182BQ5T319 152 aa18.52■□□□□ 0.56
SSR4-211ENST00000486204 PSME1Q06323 249 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms