RNA–Protein interactions for RNA: ENST00000484393.1

MACF1-218, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-218ENST00000484393 C9orf84Q5VXU9 1444 aa9.27□□□□□ -0.93
MACF1-218ENST00000484393 ABCC1P33527 1531 aa9.26□□□□□ -0.93
MACF1-218ENST00000484393 GPATCH8Q9UKJ3 1502 aaKnown RBP9.26□□□□□ -0.93
MACF1-218ENST00000484393 FOXK1P85037 733 aa9.26□□□□□ -0.93
MACF1-218ENST00000484393 MMRN1Q13201 1228 aa9.26□□□□□ -0.93
MACF1-218ENST00000484393 SYCP2Q9BX26 1530 aa9.26□□□□□ -0.93
MACF1-218ENST00000484393 CAMSAP1Q5T5Y3 1602 aa9.25□□□□□ -0.93
MACF1-218ENST00000484393 ZNF316A6NFI3 1004 aaPredicted RBP9.25□□□□□ -0.93
MACF1-218ENST00000484393 PPARGC1BQ86YN6 1023 aaKnown RBP9.25□□□□□ -0.93
MACF1-218ENST00000484393 KRTAP3-3Q9BYR6 98 aa9.25□□□□□ -0.93
MACF1-218ENST00000484393 KRTAP3-2Q9BYR7 98 aa9.25□□□□□ -0.93
MACF1-218ENST00000484393 SCAPERQ9BY12 1400 aa9.24□□□□□ -0.93
MACF1-218ENST00000484393 TSHZ2Q9NRE2 1034 aa9.24□□□□□ -0.93
MACF1-218ENST00000484393 MYT1LQ9UL68 1186 aa9.24□□□□□ -0.93
MACF1-218ENST00000484393 ZNF777Q9ULD5 760 aaPredicted RBP9.24□□□□□ -0.93
MACF1-218ENST00000484393 PCDHGA4Q9Y5G9 962 aa9.24□□□□□ -0.93
MACF1-218ENST00000484393 CAMSAP2Q08AD1 1489 aa9.23□□□□□ -0.93
MACF1-218ENST00000484393 POTEAQ6S8J7 498 aa9.23□□□□□ -0.93
MACF1-218ENST00000484393 UPF1Q92900 1129 aaKnown RBP eCLIP9.23□□□□□ -0.93
MACF1-218ENST00000484393 PTPN23Q9H3S7 1636 aa9.23□□□□□ -0.93
MACF1-218ENST00000484393 CROCC2H7BZ55 1655 aa9.23□□□□□ -0.93
MACF1-218ENST00000484393 ANKRD13DQ6ZTN6 518 aa9.22□□□□□ -0.93
MACF1-218ENST00000484393 NPM2Q86SE8 214 aaKnown RBP9.22□□□□□ -0.93
MACF1-218ENST00000484393 WDR70Q9NW82 654 aa9.22□□□□□ -0.93
MACF1-218ENST00000484393 PTPRKQ15262 1439 aa9.22□□□□□ -0.93
MACF1-218ENST00000484393 MYOM3Q5VTT5 1437 aa9.22□□□□□ -0.93
MACF1-218ENST00000484393 EFCAB2Q5VUJ9 269 aa9.21□□□□□ -0.94
MACF1-218ENST00000484393 ZNF687Q8N1G0 1237 aa9.21□□□□□ -0.94
MACF1-218ENST00000484393 CFDP1Q9UEE9 299 aaPredicted RBP9.21□□□□□ -0.94
MACF1-218ENST00000484393 C3P01024 1663 aa9.2□□□□□ -0.94
MACF1-218ENST00000484393 TBC1D12O60347 775 aa9.2□□□□□ -0.94
MACF1-218ENST00000484393 KDM5CP41229 1560 aa9.2□□□□□ -0.94
MACF1-218ENST00000484393 ABCA6Q8N139 1617 aa9.2□□□□□ -0.94
MACF1-218ENST00000484393 LHX6Q9UPM6 363 aa9.19□□□□□ -0.94
MACF1-218ENST00000484393 ZNF518AQ6AHZ1 1483 aa9.19□□□□□ -0.94
MACF1-218ENST00000484393 PLEKHH2Q8IVE3 1493 aa9.19□□□□□ -0.94
MACF1-218ENST00000484393 INO80Q9ULG1 1556 aaPredicted RBP9.19□□□□□ -0.94
MACF1-218ENST00000484393 ADGBQ8N7X0 1667 aa9.19□□□□□ -0.94
MACF1-218ENST00000484393 KIDINS220Q9ULH0 1771 aa9.19□□□□□ -0.94
MACF1-218ENST00000484393 MFSD10Q14728 455 aa9.18□□□□□ -0.94
MACF1-218ENST00000484393 ZNF644Q9H582 1327 aaPredicted RBP9.18□□□□□ -0.94
MACF1-218ENST00000484393 DNMT1P26358 1616 aaKnown RBP9.17□□□□□ -0.94
MACF1-218ENST00000484393 ARHGEF5Q12774 1597 aa9.17□□□□□ -0.94
MACF1-218ENST00000484393 DIP2CQ9Y2E4 1556 aa9.17□□□□□ -0.94
MACF1-218ENST00000484393 CPS1P31327 1500 aa9.17□□□□□ -0.94
MACF1-218ENST00000484393 ATP7AQ04656 1500 aa9.17□□□□□ -0.94
MACF1-218ENST00000484393 PLA2R1Q13018 1463 aa9.17□□□□□ -0.94
MACF1-218ENST00000484393 FGD6Q6ZV73 1430 aa9.17□□□□□ -0.94
MACF1-218ENST00000484393 CNTLNQ9NXG0 1405 aa9.17□□□□□ -0.94
MACF1-218ENST00000484393 SLC34A2O95436 690 aa9.17□□□□□ -0.94
MACF1-218ENST00000484393 AFAP1Q8N556 730 aa9.17□□□□□ -0.94
MACF1-218ENST00000484393 NPATQ14207 1427 aa9.16□□□□□ -0.94
MACF1-218ENST00000484393 TCOF1Q13428 1488 aaKnown RBP9.15□□□□□ -0.94
MACF1-218ENST00000484393 CCDC141Q6ZP82 1450 aa9.15□□□□□ -0.94
MACF1-218ENST00000484393 SHANK2Q9UPX8 1470 aa9.15□□□□□ -0.94
MACF1-218ENST00000484393 MIA2Q96PC5 1412 aa9.15□□□□□ -0.94
MACF1-218ENST00000484393 ZMYM3Q14202 1370 aa9.15□□□□□ -0.94
MACF1-218ENST00000484393 HNRNPMP52272 730 aaKnown RBP eCLIP9.15□□□□□ -0.94
MACF1-218ENST00000484393 RNF166Q96A37 237 aaPredicted RBP9.14□□□□□ -0.95
MACF1-218ENST00000484393 KIAA1107Q9UPP5 1409 aa9.14□□□□□ -0.95
MACF1-218ENST00000484393 AXIN2Q9Y2T1 843 aa9.13□□□□□ -0.95
MACF1-218ENST00000484393 AGLP35573 1532 aa9.13□□□□□ -0.95
MACF1-218ENST00000484393 MBD5Q9P267 1494 aa9.13□□□□□ -0.95
MACF1-218ENST00000484393 MAST1Q9Y2H9 1570 aa9.12□□□□□ -0.95
MACF1-218ENST00000484393 PSDA5PKW4 1024 aaPredicted RBP9.12□□□□□ -0.95
MACF1-218ENST00000484393 MAP3K9P80192 1104 aa9.12□□□□□ -0.95
MACF1-218ENST00000484393 FAM50AQ14320 339 aaKnown RBP9.12□□□□□ -0.95
MACF1-218ENST00000484393 PTCD2Q8WV60 388 aaKnown RBP9.12□□□□□ -0.95
MACF1-218ENST00000484393 PLXNC1O60486 1568 aa9.12□□□□□ -0.95
MACF1-218ENST00000484393 MLH3Q9UHC1 1453 aa9.11□□□□□ -0.95
MACF1-218ENST00000484393 KDM2AQ9Y2K7 1162 aa9.11□□□□□ -0.95
MACF1-218ENST00000484393 SPAG9O60271 1321 aaKnown RBP9.1□□□□□ -0.95
MACF1-218ENST00000484393 ALKQ9UM73 1620 aa9.1□□□□□ -0.95
MACF1-218ENST00000484393 PBX2P40425 430 aa9.1□□□□□ -0.95
MACF1-218ENST00000484393 LSM11P83369 360 aaKnown RBP eCLIP9.1□□□□□ -0.95
MACF1-218ENST00000484393 PPP4R3BQ5MIZ7 849 aa9.1□□□□□ -0.95
MACF1-218ENST00000484393 OXER1Q8TDS5 423 aa9.1□□□□□ -0.95
MACF1-218ENST00000484393 EMILIN3Q9NT22 766 aa9.1□□□□□ -0.95
MACF1-218ENST00000484393 DAPK1P53355 1430 aa9.1□□□□□ -0.95
MACF1-218ENST00000484393 REREQ9P2R6 1566 aa9.1□□□□□ -0.95
MACF1-218ENST00000484393 E2F4Q16254 413 aa9.09□□□□□ -0.95
MACF1-218ENST00000484393 ANKLE2Q86XL3 938 aa9.09□□□□□ -0.95
MACF1-218ENST00000484393 ABCC5O15440 1437 aa9.08□□□□□ -0.96
MACF1-218ENST00000484393 STAC3Q96MF2 364 aa9.08□□□□□ -0.96
MACF1-218ENST00000484393 DPYSL4O14531 572 aa9.07□□□□□ -0.96
MACF1-218ENST00000484393 ITGAEP38570 1179 aa9.07□□□□□ -0.96
MACF1-218ENST00000484393 PTGER2P43116 358 aa9.07□□□□□ -0.96
MACF1-218ENST00000484393 A2MP01023 1474 aa9.07□□□□□ -0.96
MACF1-218ENST00000484393 CEP170BQ9Y4F5 1589 aaPredicted RBP9.07□□□□□ -0.96
MACF1-218ENST00000484393 CLTCQ00610 1675 aaKnown RBP9.07□□□□□ -0.96
MACF1-218ENST00000484393 RRBP1Q9P2E9 1410 aaKnown RBP9.06□□□□□ -0.96
MACF1-218ENST00000484393 EIF2AK4Q9P2K8 1649 aaKnown RBP9.06□□□□□ -0.96
MACF1-218ENST00000484393 SETD1AO15047 1707 aaKnown RBP9.06□□□□□ -0.96
MACF1-218ENST00000484393 CEP152O94986 1710 aa9.06□□□□□ -0.96
MACF1-218ENST00000484393 EVI5O60447 810 aa9.06□□□□□ -0.96
MACF1-218ENST00000484393 EIF5BO60841 1220 aaKnown RBP9.06□□□□□ -0.96
MACF1-218ENST00000484393 GCC2Q8IWJ2 1684 aa9.06□□□□□ -0.96
MACF1-218ENST00000484393 MROH2AA6NES4 1674 aa9.05□□□□□ -0.96
MACF1-218ENST00000484393 ZNF142P52746 1687 aaPredicted RBP9.05□□□□□ -0.96
MACF1-218ENST00000484393 ARHGAP33O14559 1287 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms