RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 CCDC39Q9UFE4 941 aa9.69□□□□□ -0.86
COL4A5-205ENST00000483338 NINLQ9Y2I6 1382 aa9.69□□□□□ -0.86
COL4A5-205ENST00000483338 BCORL1Q5H9F3 1711 aa9.69□□□□□ -0.86
COL4A5-205ENST00000483338 ROCK2O75116 1388 aaKnown RBP9.69□□□□□ -0.86
COL4A5-205ENST00000483338 CHD1O14646 1710 aa9.69□□□□□ -0.86
COL4A5-205ENST00000483338 HFM1A2PYH4 1435 aa9.69□□□□□ -0.86
COL4A5-205ENST00000483338 KIAA2012Q0VF49 1180 aa9.69□□□□□ -0.86
COL4A5-205ENST00000483338 MYBBP1AQ9BQG0 1328 aaKnown RBP9.69□□□□□ -0.86
COL4A5-205ENST00000483338 FEZ2Q9UHY8 353 aaPredicted RBP9.69□□□□□ -0.86
COL4A5-205ENST00000483338 ANKRD7Q92527 254 aa9.68□□□□□ -0.86
COL4A5-205ENST00000483338 SCAPERQ9BY12 1400 aa9.68□□□□□ -0.86
COL4A5-205ENST00000483338 ZNF445P59923 1031 aa9.68□□□□□ -0.86
COL4A5-205ENST00000483338 RAB3GAP1Q15042 981 aa9.68□□□□□ -0.86
COL4A5-205ENST00000483338 TRERF1Q96PN7 1200 aa9.68□□□□□ -0.86
COL4A5-205ENST00000483338 PTMSP20962 102 aa9.68□□□□□ -0.86
COL4A5-205ENST00000483338 TSPYL1Q9H0U9 437 aa9.68□□□□□ -0.86
COL4A5-205ENST00000483338 EFCC1Q9HA90 598 aa9.68□□□□□ -0.86
COL4A5-205ENST00000483338 DENND4BO75064 1496 aaPredicted RBP9.67□□□□□ -0.86
COL4A5-205ENST00000483338 KLHL40Q2TBA0 621 aa9.67□□□□□ -0.86
COL4A5-205ENST00000483338 SIRT1Q96EB6 747 aa9.67□□□□□ -0.86
COL4A5-205ENST00000483338 TERF2Q15554 542 aa9.67□□□□□ -0.86
COL4A5-205ENST00000483338 CC2D1BQ5T0F9 858 aaKnown RBP9.67□□□□□ -0.86
COL4A5-205ENST00000483338 CALCOCO1Q9P1Z2 691 aa9.67□□□□□ -0.86
COL4A5-205ENST00000483338 CARD10Q9BWT7 1032 aa9.66□□□□□ -0.86
COL4A5-205ENST00000483338 DDX49Q9Y6V7 483 aaKnown RBP9.66□□□□□ -0.86
COL4A5-205ENST00000483338 EIF3AQ14152 1382 aaKnown RBP9.66□□□□□ -0.86
COL4A5-205ENST00000483338 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.66□□□□□ -0.86
COL4A5-205ENST00000483338 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.66□□□□□ -0.86
COL4A5-205ENST00000483338 PTPRKQ15262 1439 aa9.66□□□□□ -0.86
COL4A5-205ENST00000483338 CTTNBP2Q8WZ74 1663 aa9.66□□□□□ -0.86
COL4A5-205ENST00000483338 HSCBQ8IWL3 235 aa9.65□□□□□ -0.86
COL4A5-205ENST00000483338 GRIPAP1Q4V328 841 aa9.65□□□□□ -0.86
COL4A5-205ENST00000483338 ERICH4A6NGS2 130 aa9.65□□□□□ -0.86
COL4A5-205ENST00000483338 TRHP20396 242 aaPredicted RBP9.65□□□□□ -0.86
COL4A5-205ENST00000483338 ZSCAN23Q3MJ62 389 aa9.65□□□□□ -0.86
COL4A5-205ENST00000483338 C22orf23Q9BZE7 217 aa9.65□□□□□ -0.86
COL4A5-205ENST00000483338 NAIPQ13075 1403 aa9.65□□□□□ -0.87
COL4A5-205ENST00000483338 PRIM1P49642 420 aaKnown RBP9.64□□□□□ -0.87
COL4A5-205ENST00000483338 KIF15Q9NS87 1388 aa9.64□□□□□ -0.87
COL4A5-205ENST00000483338 CIZ1Q9ULV3 898 aaPredicted RBP9.64□□□□□ -0.87
COL4A5-205ENST00000483338 MIA2Q96PC5 1412 aa9.64□□□□□ -0.87
COL4A5-205ENST00000483338 PLB1Q6P1J6 1458 aa9.64□□□□□ -0.87
COL4A5-205ENST00000483338 NOP2P46087 812 aaKnown RBP9.64□□□□□ -0.87
COL4A5-205ENST00000483338 SMC5Q8IY18 1101 aa9.64□□□□□ -0.87
COL4A5-205ENST00000483338 PTMAP06454 111 aaKnown RBP9.63□□□□□ -0.87
COL4A5-205ENST00000483338 CT47A1Q5JQC4 288 aaPredicted RBP9.63□□□□□ -0.87
COL4A5-205ENST00000483338 C14orf37Q86TY3 774 aa9.63□□□□□ -0.87
COL4A5-205ENST00000483338 CTNNA3Q9UI47 895 aa9.63□□□□□ -0.87
COL4A5-205ENST00000483338 EFCAB5A4FU69 1503 aa9.63□□□□□ -0.87
COL4A5-205ENST00000483338 NOLC1Q14978 699 aaKnown RBP eCLIP9.63□□□□□ -0.87
COL4A5-205ENST00000483338 CAVIN1Q6NZI2 390 aaKnown RBP9.63□□□□□ -0.87
COL4A5-205ENST00000483338 PIBF1Q8WXW3 757 aa9.63□□□□□ -0.87
COL4A5-205ENST00000483338 UGGT2Q9NYU1 1516 aa9.62□□□□□ -0.87
COL4A5-205ENST00000483338 LMOD3Q0VAK6 560 aa9.62□□□□□ -0.87
COL4A5-205ENST00000483338 PLPPR3Q6T4P5 718 aa9.62□□□□□ -0.87
COL4A5-205ENST00000483338 C17orf53Q8N3J3 647 aaPredicted RBP9.62□□□□□ -0.87
COL4A5-205ENST00000483338 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.62□□□□□ -0.87
COL4A5-205ENST00000483338 BANK1Q8NDB2 785 aa9.62□□□□□ -0.87
COL4A5-205ENST00000483338 RSPH14Q9UHP6 348 aa9.62□□□□□ -0.87
COL4A5-205ENST00000483338 DISP1Q96F81 1524 aa9.62□□□□□ -0.87
COL4A5-205ENST00000483338 DDX41Q9UJV9 622 aaKnown RBP9.62□□□□□ -0.87
COL4A5-205ENST00000483338 ZMYM4Q5VZL5 1548 aa9.62□□□□□ -0.87
COL4A5-205ENST00000483338 TNNT3P45378 269 aaPredicted RBP9.62□□□□□ -0.87
COL4A5-205ENST00000483338 DUSP27Q5VZP5 1158 aa9.62□□□□□ -0.87
COL4A5-205ENST00000483338 BLMP54132 1417 aaPredicted RBP9.61□□□□□ -0.87
COL4A5-205ENST00000483338 FKBP5Q13451 457 aaPredicted RBP9.61□□□□□ -0.87
COL4A5-205ENST00000483338 SPINK5Q9NQ38 1064 aaPredicted RBP9.61□□□□□ -0.87
COL4A5-205ENST00000483338 AK9Q5TCS8 1911 aa9.61□□□□□ -0.87
COL4A5-205ENST00000483338 CTIFO43310 598 aaKnown RBP9.61□□□□□ -0.87
COL4A5-205ENST00000483338 SSFA2P28290 1259 aa9.61□□□□□ -0.87
COL4A5-205ENST00000483338 EGFL6Q8IUX8 553 aa9.61□□□□□ -0.87
COL4A5-205ENST00000483338 TMX1Q9H3N1 280 aa9.61□□□□□ -0.87
COL4A5-205ENST00000483338 CFAP43Q8NDM7 1665 aa9.61□□□□□ -0.87
COL4A5-205ENST00000483338 RIOK3O14730 519 aaKnown RBP9.61□□□□□ -0.87
COL4A5-205ENST00000483338 MFAP1P55081 439 aaKnown RBP9.61□□□□□ -0.87
COL4A5-205ENST00000483338 FAM43BQ6ZT52 329 aaPredicted RBP9.61□□□□□ -0.87
COL4A5-205ENST00000483338 GOLGA6L22H0YM25 854 aa9.6□□□□□ -0.87
COL4A5-205ENST00000483338 GTF2A1P52655 376 aaPredicted RBP9.6□□□□□ -0.87
COL4A5-205ENST00000483338 RAD51AP2Q09MP3 1159 aa9.6□□□□□ -0.87
COL4A5-205ENST00000483338 NLRP13Q86W25 1043 aa9.6□□□□□ -0.87
COL4A5-205ENST00000483338 MORC2Q9Y6X9 1032 aaPredicted RBP9.6□□□□□ -0.87
COL4A5-205ENST00000483338 CCDC144AA2RUR9 1427 aa9.6□□□□□ -0.87
COL4A5-205ENST00000483338 DHX16O60231 1041 aaKnown RBP9.6□□□□□ -0.87
COL4A5-205ENST00000483338 BRPF1P55201 1214 aaPredicted RBP9.6□□□□□ -0.87
COL4A5-205ENST00000483338 CLEC17AQ6ZS10 378 aa9.6□□□□□ -0.87
COL4A5-205ENST00000483338 MYCBPQ99417 103 aaPredicted RBP9.6□□□□□ -0.87
COL4A5-205ENST00000483338 CASKIN1Q8WXD9 1431 aa9.6□□□□□ -0.87
COL4A5-205ENST00000483338 TEX14Q8IWB6 1497 aa9.6□□□□□ -0.87
COL4A5-205ENST00000483338 ARHGAP31Q2M1Z3 1444 aa9.6□□□□□ -0.87
COL4A5-205ENST00000483338 NCAPGQ9BPX3 1015 aa9.6□□□□□ -0.87
COL4A5-205ENST00000483338 PLEKHH2Q8IVE3 1493 aa9.59□□□□□ -0.87
COL4A5-205ENST00000483338 ZMYM3Q14202 1370 aa9.59□□□□□ -0.87
COL4A5-205ENST00000483338 BAG4O95429 457 aaKnown RBP9.59□□□□□ -0.87
COL4A5-205ENST00000483338 HNRNPH2P55795 449 aaKnown RBP9.59□□□□□ -0.87
COL4A5-205ENST00000483338 CFDP1Q9UEE9 299 aaPredicted RBP9.59□□□□□ -0.87
COL4A5-205ENST00000483338 HECW1Q76N89 1606 aa9.59□□□□□ -0.87
COL4A5-205ENST00000483338 ERCC6L2Q5T890 1561 aa9.59□□□□□ -0.87
COL4A5-205ENST00000483338 NCBP1Q09161 790 aaKnown RBP9.59□□□□□ -0.87
COL4A5-205ENST00000483338 MPNDQ8N594 471 aa9.59□□□□□ -0.87
COL4A5-205ENST00000483338 SPTLC3Q9NUV7 552 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms