RNA–Protein interactions for RNA: ENST00000479239.1

LRRC47-203, Transcript of leucine rich repeat containing 47, humanhuman

TSL 3

Gene LRRC47, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-203ENST00000479239 LRRC7Q96NW7 1537 aa8.53□□□□□ -1.04
LRRC47-203ENST00000479239 ADGRF5Q8IZF2 1346 aa8.53□□□□□ -1.04
LRRC47-203ENST00000479239 ERVK-7P63135 1459 aa8.52□□□□□ -1.05
LRRC47-203ENST00000479239 GPRASP1Q5JY77 1395 aa8.52□□□□□ -1.05
LRRC47-203ENST00000479239 CCDC7Q96M83 1385 aa8.52□□□□□ -1.05
LRRC47-203ENST00000479239 ST20-MTHFSA0A0A6YYL1 179 aa8.52□□□□□ -1.05
LRRC47-203ENST00000479239 UPF1Q92900 1129 aaKnown RBP eCLIP8.52□□□□□ -1.05
LRRC47-203ENST00000479239 ADGRB3O60242 1522 aa8.52□□□□□ -1.05
LRRC47-203ENST00000479239 MYOM2P54296 1465 aa8.51□□□□□ -1.05
LRRC47-203ENST00000479239 VGFO15240 615 aaPredicted RBP8.51□□□□□ -1.05
LRRC47-203ENST00000479239 CFAP70Q5T0N1 1121 aa8.51□□□□□ -1.05
LRRC47-203ENST00000479239 KIF7Q2M1P5 1343 aa8.51□□□□□ -1.05
LRRC47-203ENST00000479239 POLR3GLQ9BT43 218 aa8.5□□□□□ -1.05
LRRC47-203ENST00000479239 TRPM1Q7Z4N2 1603 aa8.5□□□□□ -1.05
LRRC47-203ENST00000479239 MED14O60244 1454 aa8.5□□□□□ -1.05
LRRC47-203ENST00000479239 KIF1BO60333 1816 aa8.5□□□□□ -1.05
LRRC47-203ENST00000479239 NUTM2DQ5VT03 806 aaPredicted RBP8.49□□□□□ -1.05
LRRC47-203ENST00000479239 TSHZ2Q9NRE2 1034 aa8.49□□□□□ -1.05
LRRC47-203ENST00000479239 PIK3C2BO00750 1634 aa8.49□□□□□ -1.05
LRRC47-203ENST00000479239 XIRP1Q702N8 1843 aaKnown RBP8.49□□□□□ -1.05
LRRC47-203ENST00000479239 IQGAP1P46940 1657 aa8.49□□□□□ -1.05
LRRC47-203ENST00000479239 NPHP4O75161 1426 aaPredicted RBP8.48□□□□□ -1.05
LRRC47-203ENST00000479239 ANP32CO43423 234 aa8.48□□□□□ -1.05
LRRC47-203ENST00000479239 C14orf93Q9H972 538 aaKnown RBP8.48□□□□□ -1.05
LRRC47-203ENST00000479239 NRXN1Q9ULB1 1477 aa8.48□□□□□ -1.05
LRRC47-203ENST00000479239 CFAP65Q6ZU64 1925 aaKnown RBP8.48□□□□□ -1.05
LRRC47-203ENST00000479239 TNRQ92752 1358 aa8.48□□□□□ -1.05
LRRC47-203ENST00000479239 SCAF11Q99590 1463 aaKnown RBP8.47□□□□□ -1.05
LRRC47-203ENST00000479239 ZFYVE9O95405 1425 aa8.46□□□□□ -1.05
LRRC47-203ENST00000479239 TMF1P82094 1093 aa8.46□□□□□ -1.06
LRRC47-203ENST00000479239 TESK2Q96S53 571 aa8.46□□□□□ -1.06
LRRC47-203ENST00000479239 LAMC1P11047 1609 aa8.46□□□□□ -1.06
LRRC47-203ENST00000479239 EIF3AQ14152 1382 aaKnown RBP8.46□□□□□ -1.06
LRRC47-203ENST00000479239 PIK3C2GO75747 1445 aa8.46□□□□□ -1.06
LRRC47-203ENST00000479239 FAM135BQ49AJ0 1406 aa8.46□□□□□ -1.06
LRRC47-203ENST00000479239 TMEM131LA2VDJ0 1609 aa8.45□□□□□ -1.06
LRRC47-203ENST00000479239 HDGFP51858 240 aaKnown RBP8.45□□□□□ -1.06
LRRC47-203ENST00000479239 TMEM132EQ6IEE7 984 aa8.45□□□□□ -1.06
LRRC47-203ENST00000479239 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.45□□□□□ -1.06
LRRC47-203ENST00000479239 NEXMIFQ5QGS0 1516 aa8.44□□□□□ -1.06
LRRC47-203ENST00000479239 ANKLE2Q86XL3 938 aa8.44□□□□□ -1.06
LRRC47-203ENST00000479239 RIMS2Q9UQ26 1411 aa8.44□□□□□ -1.06
LRRC47-203ENST00000479239 KIAA1210Q9ULL0 1709 aa8.43□□□□□ -1.06
LRRC47-203ENST00000479239 SRCAPQ6ZRS2 3230 aa8.43□□□□□ -1.06
LRRC47-203ENST00000479239 CDCA8Q53HL2 280 aa8.43□□□□□ -1.06
LRRC47-203ENST00000479239 TRAK1Q9UPV9 953 aa8.43□□□□□ -1.06
LRRC47-203ENST00000479239 ROBO1Q9Y6N7 1651 aa8.43□□□□□ -1.06
LRRC47-203ENST00000479239 IFT172Q9UG01 1749 aa8.43□□□□□ -1.06
LRRC47-203ENST00000479239 PPLO60437 1756 aa8.43□□□□□ -1.06
LRRC47-203ENST00000479239 CCER2I3L3R5 266 aa8.42□□□□□ -1.06
LRRC47-203ENST00000479239 TPRNQ4KMQ1 711 aa8.42□□□□□ -1.06
LRRC47-203ENST00000479239 HS6ST3Q8IZP7 471 aa8.42□□□□□ -1.06
LRRC47-203ENST00000479239 NLRP1Q9C000 1473 aa8.42□□□□□ -1.06
LRRC47-203ENST00000479239 SETBP1Q9Y6X0 1596 aa8.41□□□□□ -1.06
LRRC47-203ENST00000479239 CENPJQ9HC77 1338 aaPredicted RBP8.41□□□□□ -1.06
LRRC47-203ENST00000479239 GSE1Q14687 1217 aa8.41□□□□□ -1.06
LRRC47-203ENST00000479239 YTHDC1Q96MU7 727 aaKnown RBP8.41□□□□□ -1.06
LRRC47-203ENST00000479239 STK26Q9P289 416 aa8.41□□□□□ -1.06
LRRC47-203ENST00000479239 TMEM2Q9UHN6 1383 aa8.4□□□□□ -1.06
LRRC47-203ENST00000479239 THEMISQ8N1K5 641 aaPredicted RBP8.4□□□□□ -1.06
LRRC47-203ENST00000479239 RNF25Q96BH1 459 aaPredicted RBP8.4□□□□□ -1.06
LRRC47-203ENST00000479239 LRP6O75581 1613 aa8.4□□□□□ -1.07
LRRC47-203ENST00000479239 ADGRB1O14514 1584 aa8.39□□□□□ -1.07
LRRC47-203ENST00000479239 CDK12Q9NYV4 1490 aaPredicted RBP8.39□□□□□ -1.07
LRRC47-203ENST00000479239 NUBP1P53384 320 aa8.39□□□□□ -1.07
LRRC47-203ENST00000479239 TXNDC2Q86VQ3 553 aa8.39□□□□□ -1.07
LRRC47-203ENST00000479239 EID1Q9Y6B2 187 aa8.39□□□□□ -1.07
LRRC47-203ENST00000479239 PRKRIP1Q9H875 184 aaPredicted RBP8.38□□□□□ -1.07
LRRC47-203ENST00000479239 PANK3Q9H999 370 aa8.38□□□□□ -1.07
LRRC47-203ENST00000479239 POGKQ9P215 609 aa8.38□□□□□ -1.07
LRRC47-203ENST00000479239 PHLPP1O60346 1717 aa8.37□□□□□ -1.07
LRRC47-203ENST00000479239 SBNO2Q9Y2G9 1366 aa8.37□□□□□ -1.07
LRRC47-203ENST00000479239 LTKP29376 864 aa8.37□□□□□ -1.07
LRRC47-203ENST00000479239 CNGB1Q14028 1251 aaPredicted RBP8.37□□□□□ -1.07
LRRC47-203ENST00000479239 YTHDC2Q9H6S0 1430 aaKnown RBP8.37□□□□□ -1.07
LRRC47-203ENST00000479239 COL16A1Q07092 1604 aaPredicted RBP8.36□□□□□ -1.07
LRRC47-203ENST00000479239 JCADQ9P266 1359 aa8.36□□□□□ -1.07
LRRC47-203ENST00000479239 MYO5BQ9ULV0 1848 aa8.36□□□□□ -1.07
LRRC47-203ENST00000479239 CENPBP07199 599 aaPredicted RBP8.36□□□□□ -1.07
LRRC47-203ENST00000479239 SAFB2Q14151 953 aaKnown RBP eCLIP8.36□□□□□ -1.07
LRRC47-203ENST00000479239 DCAF8Q5TAQ9 597 aa8.36□□□□□ -1.07
LRRC47-203ENST00000479239 PRAM1Q96QH2 718 aa8.36□□□□□ -1.07
LRRC47-203ENST00000479239 LRPPRCP42704 1394 aaKnown RBP8.35□□□□□ -1.07
LRRC47-203ENST00000479239 EVC2Q86UK5 1308 aa8.35□□□□□ -1.07
LRRC47-203ENST00000479239 SPDYE1Q8NFV5 336 aaPredicted RBP8.35□□□□□ -1.07
LRRC47-203ENST00000479239 PLEKHG1Q9ULL1 1385 aa8.35□□□□□ -1.07
LRRC47-203ENST00000479239 ASXL1Q8IXJ9 1541 aa8.34□□□□□ -1.07
LRRC47-203ENST00000479239 KDM5AP29375 1690 aaKnown RBP8.34□□□□□ -1.07
LRRC47-203ENST00000479239 PER1O15534 1290 aaPredicted RBP8.34□□□□□ -1.07
LRRC47-203ENST00000479239 ZNF772Q68DY9 489 aaPredicted RBP8.34□□□□□ -1.07
LRRC47-203ENST00000479239 PUS7Q96PZ0 661 aaKnown RBP8.34□□□□□ -1.07
LRRC47-203ENST00000479239 UBR1Q8IWV7 1749 aa8.34□□□□□ -1.07
LRRC47-203ENST00000479239 METP08581 1390 aa8.34□□□□□ -1.07
LRRC47-203ENST00000479239 ABCC11Q96J66 1382 aa8.34□□□□□ -1.07
LRRC47-203ENST00000479239 MINK1Q8N4C8 1332 aaPredicted RBP8.33□□□□□ -1.08
LRRC47-203ENST00000479239 ARHGAP23Q9P227 1491 aa8.33□□□□□ -1.08
LRRC47-203ENST00000479239 RIOK3O14730 519 aaKnown RBP8.33□□□□□ -1.08
LRRC47-203ENST00000479239 RALBP1Q15311 655 aa8.33□□□□□ -1.08
LRRC47-203ENST00000479239 TMC1Q8TDI8 760 aa8.33□□□□□ -1.08
LRRC47-203ENST00000479239 SIRT1Q96EB6 747 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms