RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-208ENST00000478188 LHX8Q68G74 356 aa6.44□□□□□ -1.38
POLR2B-208ENST00000478188 LAMC1P11047 1609 aa6.44□□□□□ -1.38
POLR2B-208ENST00000478188 MYOM2P54296 1465 aa6.42□□□□□ -1.38
POLR2B-208ENST00000478188 TXNDC2Q86VQ3 553 aa6.42□□□□□ -1.38
POLR2B-208ENST00000478188 PIK3R4Q99570 1358 aa6.42□□□□□ -1.38
POLR2B-208ENST00000478188 ROBO1Q9Y6N7 1651 aa6.42□□□□□ -1.38
POLR2B-208ENST00000478188 ANKRD30BQ9BXX2 1392 aa6.41□□□□□ -1.38
POLR2B-208ENST00000478188 NHSL1Q5SYE7 1610 aa6.41□□□□□ -1.38
POLR2B-208ENST00000478188 PIK3C2GO75747 1445 aa6.41□□□□□ -1.38
POLR2B-208ENST00000478188 NCOA3Q9Y6Q9 1424 aa6.4□□□□□ -1.38
POLR2B-208ENST00000478188 HRCP23327 699 aa6.4□□□□□ -1.38
POLR2B-208ENST00000478188 ADGRB1O14514 1584 aa6.4□□□□□ -1.38
POLR2B-208ENST00000478188 PTCH1Q13635 1447 aa6.4□□□□□ -1.38
POLR2B-208ENST00000478188 COL16A1Q07092 1604 aaPredicted RBP6.4□□□□□ -1.39
POLR2B-208ENST00000478188 MNX1P50219 401 aaPredicted RBP6.4□□□□□ -1.39
POLR2B-208ENST00000478188 MPHOSPH9Q99550 1183 aa6.4□□□□□ -1.39
POLR2B-208ENST00000478188 KIAA1210Q9ULL0 1709 aa6.4□□□□□ -1.39
POLR2B-208ENST00000478188 METP08581 1390 aa6.39□□□□□ -1.39
POLR2B-208ENST00000478188 POTEIP0CG38 1075 aa6.39□□□□□ -1.39
POLR2B-208ENST00000478188 KCNA6P17658 529 aa6.39□□□□□ -1.39
POLR2B-208ENST00000478188 TBX22Q9Y458 520 aa6.39□□□□□ -1.39
POLR2B-208ENST00000478188 AHDC1Q5TGY3 1603 aaPredicted RBP6.39□□□□□ -1.39
POLR2B-208ENST00000478188 TECPR2O15040 1411 aa6.39□□□□□ -1.39
POLR2B-208ENST00000478188 IFFO2Q5TF58 517 aa6.39□□□□□ -1.39
POLR2B-208ENST00000478188 EID1Q9Y6B2 187 aa6.39□□□□□ -1.39
POLR2B-208ENST00000478188 TMEM94Q12767 1356 aa6.38□□□□□ -1.39
POLR2B-208ENST00000478188 MIER1Q8N108 512 aa6.38□□□□□ -1.39
POLR2B-208ENST00000478188 CCDC144AA2RUR9 1427 aa6.38□□□□□ -1.39
POLR2B-208ENST00000478188 ARHGEF28Q8N1W1 1705 aaKnown RBP6.38□□□□□ -1.39
POLR2B-208ENST00000478188 FMN2Q9NZ56 1722 aa6.38□□□□□ -1.39
POLR2B-208ENST00000478188 CDC42BPGQ6DT37 1551 aa6.38□□□□□ -1.39
POLR2B-208ENST00000478188 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.38□□□□□ -1.39
POLR2B-208ENST00000478188 PHF12Q96QT6 1004 aa6.38□□□□□ -1.39
POLR2B-208ENST00000478188 ADGRB2O60241 1585 aa6.37□□□□□ -1.39
POLR2B-208ENST00000478188 DCCP43146 1447 aa6.37□□□□□ -1.39
POLR2B-208ENST00000478188 SLC26A8Q96RN1 970 aa6.37□□□□□ -1.39
POLR2B-208ENST00000478188 SHPRHQ149N8 1683 aa6.37□□□□□ -1.39
POLR2B-208ENST00000478188 ACIN1Q9UKV3 1341 aaKnown RBP6.37□□□□□ -1.39
POLR2B-208ENST00000478188 GALR2O43603 387 aaPredicted RBP6.37□□□□□ -1.39
POLR2B-208ENST00000478188 PHLPP1O60346 1717 aa6.37□□□□□ -1.39
POLR2B-208ENST00000478188 RPGRIP1LQ68CZ1 1315 aa6.37□□□□□ -1.39
POLR2B-208ENST00000478188 USP32Q8NFA0 1604 aa6.37□□□□□ -1.39
POLR2B-208ENST00000478188 DLC1Q96QB1 1528 aa6.36□□□□□ -1.39
POLR2B-208ENST00000478188 FBXO3Q9UK99 471 aa6.36□□□□□ -1.39
POLR2B-208ENST00000478188 DHX57Q6P158 1386 aaKnown RBP6.36□□□□□ -1.39
POLR2B-208ENST00000478188 FAM135BQ49AJ0 1406 aa6.36□□□□□ -1.39
POLR2B-208ENST00000478188 ADGRL3Q9HAR2 1447 aa6.36□□□□□ -1.39
POLR2B-208ENST00000478188 NUTM2DQ5VT03 806 aaPredicted RBP6.35□□□□□ -1.39
POLR2B-208ENST00000478188 TRIM52Q96A61 297 aa6.35□□□□□ -1.39
POLR2B-208ENST00000478188 ADGRF5Q8IZF2 1346 aa6.35□□□□□ -1.39
POLR2B-208ENST00000478188 ROBO2Q9HCK4 1378 aa6.35□□□□□ -1.39
POLR2B-208ENST00000478188 MST1RQ04912 1400 aa6.35□□□□□ -1.39
POLR2B-208ENST00000478188 TRPM1Q7Z4N2 1603 aa6.35□□□□□ -1.39
POLR2B-208ENST00000478188 RGPD8O14715 1765 aaPredicted RBP6.34□□□□□ -1.39
POLR2B-208ENST00000478188 TOPAZ1Q8N9V7 1692 aa6.34□□□□□ -1.39
POLR2B-208ENST00000478188 PLCD3Q8N3E9 789 aa6.34□□□□□ -1.39
POLR2B-208ENST00000478188 TSPYL2Q9H2G4 693 aaPredicted RBP6.34□□□□□ -1.39
POLR2B-208ENST00000478188 RGS17Q9UGC6 210 aaPredicted RBP6.34□□□□□ -1.39
POLR2B-208ENST00000478188 COL22A1Q8NFW1 1626 aaPredicted RBP6.34□□□□□ -1.39
POLR2B-208ENST00000478188 UBAP1LF5GYI3 381 aa6.33□□□□□ -1.4
POLR2B-208ENST00000478188 ABCA3Q99758 1704 aa6.33□□□□□ -1.4
POLR2B-208ENST00000478188 CRYBG1Q9Y4K1 1723 aa6.33□□□□□ -1.4
POLR2B-208ENST00000478188 LRPPRCP42704 1394 aaKnown RBP6.33□□□□□ -1.4
POLR2B-208ENST00000478188 ZBTB47Q9UFB7 747 aaPredicted RBP6.33□□□□□ -1.4
POLR2B-208ENST00000478188 CHGAP10645 457 aaKnown RBP6.32□□□□□ -1.4
POLR2B-208ENST00000478188 HDGFP51858 240 aaKnown RBP6.32□□□□□ -1.4
POLR2B-208ENST00000478188 TRPM3Q9HCF6 1732 aaPredicted RBP6.32□□□□□ -1.4
POLR2B-208ENST00000478188 HSPA1LP34931 641 aa6.32□□□□□ -1.4
POLR2B-208ENST00000478188 KIF1AQ12756 1690 aa6.32□□□□□ -1.4
POLR2B-208ENST00000478188 YTHDC2Q9H6S0 1430 aaKnown RBP6.32□□□□□ -1.4
POLR2B-208ENST00000478188 AMOTL2Q9Y2J4 779 aa6.31□□□□□ -1.4
POLR2B-208ENST00000478188 MARF1Q9Y4F3 1742 aaKnown RBP6.31□□□□□ -1.4
POLR2B-208ENST00000478188 ABCC11Q96J66 1382 aa6.31□□□□□ -1.4
POLR2B-208ENST00000478188 PPP1R15AO75807 674 aaPredicted RBP6.31□□□□□ -1.4
POLR2B-208ENST00000478188 RBM33Q96EV2 1170 aaKnown RBP6.31□□□□□ -1.4
POLR2B-208ENST00000478188 TOM1O60784 492 aa6.31□□□□□ -1.4
POLR2B-208ENST00000478188 MSH6P52701 1360 aa6.31□□□□□ -1.4
POLR2B-208ENST00000478188 PLEKHH1Q9ULM0 1364 aa6.31□□□□□ -1.4
POLR2B-208ENST00000478188 VGFO15240 615 aaPredicted RBP6.3□□□□□ -1.4
POLR2B-208ENST00000478188 LRP6O75581 1613 aa6.3□□□□□ -1.4
POLR2B-208ENST00000478188 C1orf167Q5SNV9 1468 aa6.3□□□□□ -1.4
POLR2B-208ENST00000478188 ZNF326Q5BKZ1 582 aaKnown RBP6.3□□□□□ -1.4
POLR2B-208ENST00000478188 PROSER2Q86WR7 435 aaPredicted RBP6.3□□□□□ -1.4
POLR2B-208ENST00000478188 C14orf93Q9H972 538 aaKnown RBP6.3□□□□□ -1.4
POLR2B-208ENST00000478188 PXDNQ92626 1479 aa6.3□□□□□ -1.4
POLR2B-208ENST00000478188 MS4A3Q96HJ5 214 aa6.29□□□□□ -1.4
POLR2B-208ENST00000478188 ALS2Q96Q42 1657 aa6.29□□□□□ -1.4
POLR2B-208ENST00000478188 QRICH2Q9H0J4 1663 aa6.29□□□□□ -1.4
POLR2B-208ENST00000478188 ITSN1Q15811 1721 aa6.29□□□□□ -1.4
POLR2B-208ENST00000478188 VASPP50552 380 aaPredicted RBP6.28□□□□□ -1.4
POLR2B-208ENST00000478188 CCDC61Q9Y6R9 512 aa6.28□□□□□ -1.4
POLR2B-208ENST00000478188 UPF1Q92900 1129 aaKnown RBP eCLIP6.28□□□□□ -1.4
POLR2B-208ENST00000478188 SIRT1Q96EB6 747 aa6.28□□□□□ -1.4
POLR2B-208ENST00000478188 C19orf44Q9H6X5 657 aa6.27□□□□□ -1.41
POLR2B-208ENST00000478188 BRINP3Q76B58 766 aa6.27□□□□□ -1.41
POLR2B-208ENST00000478188 PIP4K2BP78356 416 aa6.27□□□□□ -1.41
POLR2B-208ENST00000478188 SLAIN2Q9P270 581 aa6.27□□□□□ -1.41
POLR2B-208ENST00000478188 TULP4Q9NRJ4 1543 aa6.26□□□□□ -1.41
POLR2B-208ENST00000478188 CFAP70Q5T0N1 1121 aa6.26□□□□□ -1.41
POLR2B-208ENST00000478188 SLC39A7Q92504 469 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms