RNA–Protein interactions for RNA: ENST00000472211.2

SPTAN1-205, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 272 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-205ENST00000472211 KIF1BO60333 1816 aa19.97■□□□□ 0.79
SPTAN1-205ENST00000472211 BLMP54132 1417 aaPredicted RBP19.95■□□□□ 0.78
SPTAN1-205ENST00000472211 ROBO2Q9HCK4 1378 aa19.95■□□□□ 0.78
SPTAN1-205ENST00000472211 PRAG1Q86YV5 1406 aa19.94■□□□□ 0.78
SPTAN1-205ENST00000472211 APLP2Q06481 763 aa19.93■□□□□ 0.78
SPTAN1-205ENST00000472211 GJD4Q96KN9 370 aaPredicted RBP19.93■□□□□ 0.78
SPTAN1-205ENST00000472211 NUP155O75694 1391 aa19.93■□□□□ 0.78
SPTAN1-205ENST00000472211 ROCK1Q13464 1354 aa19.92■□□□□ 0.78
SPTAN1-205ENST00000472211 DEFB132Q7Z7B7 95 aa19.91■□□□□ 0.78
SPTAN1-205ENST00000472211 RALGAPBQ86X10 1494 aa19.91■□□□□ 0.78
SPTAN1-205ENST00000472211 SLIT2O94813 1529 aa19.9■□□□□ 0.78
SPTAN1-205ENST00000472211 CDC42BPGQ6DT37 1551 aa19.9■□□□□ 0.78
SPTAN1-205ENST00000472211 ZNF326Q5BKZ1 582 aaKnown RBP19.89■□□□□ 0.77
SPTAN1-205ENST00000472211 PPLO60437 1756 aa19.87■□□□□ 0.77
SPTAN1-205ENST00000472211 PLCH1Q4KWH8 1693 aa19.87■□□□□ 0.77
SPTAN1-205ENST00000472211 USP32Q8NFA0 1604 aa19.87■□□□□ 0.77
SPTAN1-205ENST00000472211 ABCA3Q99758 1704 aa19.85■□□□□ 0.77
SPTAN1-205ENST00000472211 NWD2Q9ULI1 1742 aa19.85■□□□□ 0.77
SPTAN1-205ENST00000472211 NPHP3Q7Z494 1330 aa19.83■□□□□ 0.77
SPTAN1-205ENST00000472211 HFM1A2PYH4 1435 aa19.83■□□□□ 0.76
SPTAN1-205ENST00000472211 RGPD8O14715 1765 aaPredicted RBP19.83■□□□□ 0.76
SPTAN1-205ENST00000472211 XPCQ01831 940 aaPredicted RBP19.82■□□□□ 0.76
SPTAN1-205ENST00000472211 UNC5CLQ8IV45 518 aa19.82■□□□□ 0.76
SPTAN1-205ENST00000472211 FMN2Q9NZ56 1722 aa19.8■□□□□ 0.76
SPTAN1-205ENST00000472211 FOXO3O43524 673 aa19.8■□□□□ 0.76
SPTAN1-205ENST00000472211 ESCO1Q5FWF5 840 aa19.79■□□□□ 0.76
SPTAN1-205ENST00000472211 KIF1AQ12756 1690 aa19.78■□□□□ 0.76
SPTAN1-205ENST00000472211 HRCP23327 699 aa19.77■□□□□ 0.76
SPTAN1-205ENST00000472211 SEPT12Q8IYM1 358 aa19.77■□□□□ 0.76
SPTAN1-205ENST00000472211 RGPD1P0DJD0 1748 aa19.76■□□□□ 0.75
SPTAN1-205ENST00000472211 NRAPQ86VF7 1730 aa19.76■□□□□ 0.75
SPTAN1-205ENST00000472211 PSDA5PKW4 1024 aaPredicted RBP19.76■□□□□ 0.75
SPTAN1-205ENST00000472211 TNS1Q9HBL0 1735 aaKnown RBP19.76■□□□□ 0.75
SPTAN1-205ENST00000472211 ONECUT3O60422 494 aaPredicted RBP19.75■□□□□ 0.75
SPTAN1-205ENST00000472211 KNDC1Q76NI1 1749 aa19.75■□□□□ 0.75
SPTAN1-205ENST00000472211 NAIPQ13075 1403 aa19.75■□□□□ 0.75
SPTAN1-205ENST00000472211 SPATA31A3Q5VYP0 1347 aa19.74■□□□□ 0.75
SPTAN1-205ENST00000472211 IFT172Q9UG01 1749 aa19.73■□□□□ 0.75
SPTAN1-205ENST00000472211 SF3B2Q13435 895 aaKnown RBP19.73■□□□□ 0.75
SPTAN1-205ENST00000472211 VGFO15240 615 aaPredicted RBP19.72■□□□□ 0.75
SPTAN1-205ENST00000472211 LRPPRCP42704 1394 aaKnown RBP19.71■□□□□ 0.75
SPTAN1-205ENST00000472211 VPS72Q15906 364 aa19.71■□□□□ 0.75
SPTAN1-205ENST00000472211 KRT27Q7Z3Y8 459 aa19.7■□□□□ 0.74
SPTAN1-205ENST00000472211 TECPR2O15040 1411 aa19.69■□□□□ 0.74
SPTAN1-205ENST00000472211 NUTM2FA1L443 756 aa19.68■□□□□ 0.74
SPTAN1-205ENST00000472211 CCDC144AA2RUR9 1427 aa19.68■□□□□ 0.74
SPTAN1-205ENST00000472211 PLEKHH1Q9ULM0 1364 aa19.66■□□□□ 0.74
SPTAN1-205ENST00000472211 ITGAEP38570 1179 aa19.65■□□□□ 0.74
SPTAN1-205ENST00000472211 BAG6P46379 1132 aa19.65■□□□□ 0.74
SPTAN1-205ENST00000472211 WAPLQ7Z5K2 1190 aa19.65■□□□□ 0.74
SPTAN1-205ENST00000472211 CABLES1Q8TDN4 633 aa19.65■□□□□ 0.74
SPTAN1-205ENST00000472211 RPGRIP1LQ68CZ1 1315 aa19.65■□□□□ 0.74
SPTAN1-205ENST00000472211 TNS3Q68CZ2 1445 aa19.65■□□□□ 0.74
SPTAN1-205ENST00000472211 THSD7AQ9UPZ6 1657 aa19.64■□□□□ 0.73
SPTAN1-205ENST00000472211 TRPM3Q9HCF6 1732 aaPredicted RBP19.63■□□□□ 0.73
SPTAN1-205ENST00000472211 CRYBG1Q9Y4K1 1723 aa19.63■□□□□ 0.73
SPTAN1-205ENST00000472211 DISP2A7MBM2 1401 aa19.62■□□□□ 0.73
SPTAN1-205ENST00000472211 EN1Q05925 392 aaPredicted RBP19.62■□□□□ 0.73
SPTAN1-205ENST00000472211 KRT28Q7Z3Y7 464 aa19.62■□□□□ 0.73
SPTAN1-205ENST00000472211 R3HDM1Q15032 1099 aaKnown RBP19.61■□□□□ 0.73
SPTAN1-205ENST00000472211 RREB1Q92766 1687 aa19.61■□□□□ 0.73
SPTAN1-205ENST00000472211 ALS2Q96Q42 1657 aa19.6■□□□□ 0.73
SPTAN1-205ENST00000472211 COL14A1Q05707 1796 aaKnown RBP19.6■□□□□ 0.73
SPTAN1-205ENST00000472211 FAM83GA6ND36 823 aa19.59■□□□□ 0.73
SPTAN1-205ENST00000472211 CCDC9Q9Y3X0 531 aaKnown RBP19.59■□□□□ 0.73
SPTAN1-205ENST00000472211 ABCC11Q96J66 1382 aa19.58■□□□□ 0.73
SPTAN1-205ENST00000472211 ADGRF5Q8IZF2 1346 aa19.58■□□□□ 0.73
SPTAN1-205ENST00000472211 FAM182BQ5T319 152 aa19.58■□□□□ 0.72
SPTAN1-205ENST00000472211 NUP188Q5SRE5 1749 aa19.58■□□□□ 0.72
SPTAN1-205ENST00000472211 NRXN1Q9ULB1 1477 aa19.58■□□□□ 0.72
SPTAN1-205ENST00000472211 FAM98CQ17RN3 349 aaKnown RBP19.57■□□□□ 0.72
SPTAN1-205ENST00000472211 STK26Q9P289 416 aa19.57■□□□□ 0.72
SPTAN1-205ENST00000472211 RRBP1Q9P2E9 1410 aaKnown RBP19.57■□□□□ 0.72
SPTAN1-205ENST00000472211 SBNO1A3KN83 1393 aa19.57■□□□□ 0.72
SPTAN1-205ENST00000472211 PLEKHG5O94827 1062 aa19.54■□□□□ 0.72
SPTAN1-205ENST00000472211 HAP1P54257 671 aaPredicted RBP19.54■□□□□ 0.72
SPTAN1-205ENST00000472211 ADGRB2O60241 1585 aa19.53■□□□□ 0.72
SPTAN1-205ENST00000472211 TMEM132EQ6IEE7 984 aa19.53■□□□□ 0.72
SPTAN1-205ENST00000472211 PHF8Q9UPP1 1060 aa19.53■□□□□ 0.72
SPTAN1-205ENST00000472211 YY1P25490 414 aa19.52■□□□□ 0.72
SPTAN1-205ENST00000472211 EZH2Q15910 746 aaKnown RBP19.52■□□□□ 0.72
SPTAN1-205ENST00000472211 ARHGEF10O15013 1369 aa19.52■□□□□ 0.72
SPTAN1-205ENST00000472211 PIK3C2GO75747 1445 aa19.51■□□□□ 0.71
SPTAN1-205ENST00000472211 SPATA31E1Q6ZUB1 1445 aa19.51■□□□□ 0.71
SPTAN1-205ENST00000472211 YTHDC2Q9H6S0 1430 aaKnown RBP19.51■□□□□ 0.71
SPTAN1-205ENST00000472211 A0A0G2JS52 829 aa19.51■□□□□ 0.71
SPTAN1-205ENST00000472211 MYT1Q01538 1121 aa19.51■□□□□ 0.71
SPTAN1-205ENST00000472211 PSME1Q06323 249 aa19.5■□□□□ 0.71
SPTAN1-205ENST00000472211 CAMKK2Q96RR4 588 aa19.5■□□□□ 0.71
SPTAN1-205ENST00000472211 BTG4Q9NY30 223 aa19.5■□□□□ 0.71
SPTAN1-205ENST00000472211 CAMTA1Q9Y6Y1 1673 aa19.49■□□□□ 0.71
SPTAN1-205ENST00000472211 SPATA31A5Q5VU36 1347 aa19.49■□□□□ 0.71
SPTAN1-205ENST00000472211 SPATA31A7Q8IWB4 1347 aa19.49■□□□□ 0.71
SPTAN1-205ENST00000472211 LMOD2Q6P5Q4 547 aa19.46■□□□□ 0.71
SPTAN1-205ENST00000472211 SIRT1Q96EB6 747 aa19.45■□□□□ 0.7
SPTAN1-205ENST00000472211 ANKRD30BQ9BXX2 1392 aa19.44■□□□□ 0.7
SPTAN1-205ENST00000472211 PHRF1Q9P1Y6 1649 aaKnown RBP19.43■□□□□ 0.7
SPTAN1-205ENST00000472211 TRIM37O94972 964 aa19.42■□□□□ 0.7
SPTAN1-205ENST00000472211 PARD3Q8TEW0 1356 aa19.42■□□□□ 0.7
SPTAN1-205ENST00000472211 RGL3Q3MIN7 710 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms