RNA–Protein interactions for RNA: ENST00000472211.2

SPTAN1-205, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 272 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-205ENST00000472211 NISCHQ9Y2I1 1504 aa33.42■■■□□ 2.94
SPTAN1-205ENST00000472211 ABCC9O60706 1549 aa30.88■■■□□ 2.53
SPTAN1-205ENST00000472211 CCDC180Q9P1Z9 1646 aa30.36■■■□□ 2.45
SPTAN1-205ENST00000472211 DNAJC5BQ9UF47 199 aa29.61■■■□□ 2.33
SPTAN1-205ENST00000472211 RB1CC1Q8TDY2 1594 aa29.13■■■□□ 2.25
SPTAN1-205ENST00000472211 NACADO15069 1562 aa28.77■■■□□ 2.2
SPTAN1-205ENST00000472211 UNC13AQ9UPW8 1703 aa28.72■■■□□ 2.19
SPTAN1-205ENST00000472211 PABPN1Q86U42 306 aaKnown RBP eCLIP28.58■■■□□ 2.17
SPTAN1-205ENST00000472211 BICRAQ9NZM4 1560 aa28.44■■■□□ 2.14
SPTAN1-205ENST00000472211 DCAF8L2P0C7V8 631 aa28.27■■■□□ 2.12
SPTAN1-205ENST00000472211 MYO15BQ96JP2 1530 aa28.18■■■□□ 2.1
SPTAN1-205ENST00000472211 CC2D2AQ9P2K1 1620 aa27.95■■■□□ 2.06
SPTAN1-205ENST00000472211 CECR2Q9BXF3 1484 aa27.87■■■□□ 2.05
SPTAN1-205ENST00000472211 SHROOM4Q9ULL8 1493 aa27.83■■■□□ 2.04
SPTAN1-205ENST00000472211 EIF4G1Q04637 1599 aaKnown RBP27.7■■■□□ 2.03
SPTAN1-205ENST00000472211 DNAJC5Q9H3Z4 198 aa27.58■■■□□ 2.01
SPTAN1-205ENST00000472211 ZCCHC6Q5VYS8 1495 aaKnown RBP27.57■■■□□ 2
SPTAN1-205ENST00000472211 DCAF1Q9Y4B6 1507 aa27.57■■■□□ 2
SPTAN1-205ENST00000472211 SCRIBQ14160 1630 aa27.56■■■□□ 2
SPTAN1-205ENST00000472211 CUX2O14529 1486 aa26.87■■□□□ 1.89
SPTAN1-205ENST00000472211 ERCC6Q03468 1493 aa26.62■■□□□ 1.85
SPTAN1-205ENST00000472211 NCAPD3P42695 1498 aa26.55■■□□□ 1.84
SPTAN1-205ENST00000472211 NESP48681 1621 aa26.4■■□□□ 1.82
SPTAN1-205ENST00000472211 ATAD2BQ9ULI0 1458 aa26.39■■□□□ 1.82
SPTAN1-205ENST00000472211 HMGXB3Q12766 1538 aa26.34■■□□□ 1.81
SPTAN1-205ENST00000472211 THOC2Q8NI27 1593 aaKnown RBP26.33■■□□□ 1.81
SPTAN1-205ENST00000472211 SMARCA4P51532 1647 aa26.26■■□□□ 1.79
SPTAN1-205ENST00000472211 SMARCA2P51531 1590 aa26.26■■□□□ 1.79
SPTAN1-205ENST00000472211 KIF21AQ7Z4S6 1674 aa26.14■■□□□ 1.78
SPTAN1-205ENST00000472211 LAMC3Q9Y6N6 1575 aa26.09■■□□□ 1.77
SPTAN1-205ENST00000472211 BAZ1BQ9UIG0 1483 aaKnown RBP26.05■■□□□ 1.76
SPTAN1-205ENST00000472211 PEG3Q9GZU2 1588 aa26.03■■□□□ 1.76
SPTAN1-205ENST00000472211 TRIM41Q8WV44 630 aa26.02■■□□□ 1.76
SPTAN1-205ENST00000472211 BAZ1AQ9NRL2 1556 aaPredicted RBP25.95■■□□□ 1.75
SPTAN1-205ENST00000472211 PDS5BQ9NTI5 1447 aa25.84■■□□□ 1.73
SPTAN1-205ENST00000472211 MROH2BQ7Z745 1585 aa25.78■■□□□ 1.72
SPTAN1-205ENST00000472211 WDR62O43379 1518 aa25.76■■□□□ 1.71
SPTAN1-205ENST00000472211 MRC2Q9UBG0 1479 aa25.72■■□□□ 1.71
SPTAN1-205ENST00000472211 CADPSQ9ULU8 1353 aa25.66■■□□□ 1.7
SPTAN1-205ENST00000472211 WIZO95785 1651 aa25.48■■□□□ 1.67
SPTAN1-205ENST00000472211 CEP164Q9UPV0 1460 aa25.47■■□□□ 1.67
SPTAN1-205ENST00000472211 OSCARQ8IYS5 282 aa25.43■■□□□ 1.66
SPTAN1-205ENST00000472211 FANCD2Q9BXW9 1451 aa25.4■■□□□ 1.66
SPTAN1-205ENST00000472211 RIMBP3CA6NJZ7 1639 aa25.38■■□□□ 1.65
SPTAN1-205ENST00000472211 RIMBP3BA6NNM3 1639 aa25.38■■□□□ 1.65
SPTAN1-205ENST00000472211 RIMBP3Q9UFD9 1639 aa25.38■■□□□ 1.65
SPTAN1-205ENST00000472211 URB2Q14146 1524 aaKnown RBP25.31■■□□□ 1.64
SPTAN1-205ENST00000472211 CFTRP13569 1480 aa25.28■■□□□ 1.64
SPTAN1-205ENST00000472211 PRDM2Q13029 1718 aa25.18■■□□□ 1.62
SPTAN1-205ENST00000472211 ARHGEF11O15085 1522 aa25.17■■□□□ 1.62
SPTAN1-205ENST00000472211 ZNF608Q9ULD9 1512 aaPredicted RBP25.09■■□□□ 1.61
SPTAN1-205ENST00000472211 TOP2AP11388 1531 aaKnown RBP25.04■■□□□ 1.6
SPTAN1-205ENST00000472211 IFT140Q96RY7 1462 aa24.98■■□□□ 1.59
SPTAN1-205ENST00000472211 CHD1O14646 1710 aa24.97■■□□□ 1.59
SPTAN1-205ENST00000472211 EIF4G3O43432 1585 aaKnown RBP24.96■■□□□ 1.59
SPTAN1-205ENST00000472211 RSF1Q96T23 1441 aaPredicted RBP24.94■■□□□ 1.58
SPTAN1-205ENST00000472211 CYB5RLQ6IPT4 315 aa24.9■■□□□ 1.58
SPTAN1-205ENST00000472211 TOPBP1Q92547 1522 aa24.89■■□□□ 1.57
SPTAN1-205ENST00000472211 ARAP1Q96P48 1450 aa24.89■■□□□ 1.57
SPTAN1-205ENST00000472211 TARBP1Q13395 1621 aaKnown RBP24.8■■□□□ 1.56
SPTAN1-205ENST00000472211 TRHP20396 242 aaPredicted RBP24.77■■□□□ 1.56
SPTAN1-205ENST00000472211 CCDC88BA6NC98 1476 aa24.75■■□□□ 1.55
SPTAN1-205ENST00000472211 DNMBPQ6XZF7 1577 aa24.75■■□□□ 1.55
SPTAN1-205ENST00000472211 AQRO60306 1485 aaKnown RBP eCLIP24.73■■□□□ 1.553e-7■■■□□ 16
SPTAN1-205ENST00000472211 ABCC8Q09428 1581 aa24.71■■□□□ 1.55
SPTAN1-205ENST00000472211 CLASP1Q7Z460 1538 aa24.6■■□□□ 1.53
SPTAN1-205ENST00000472211 POLA1P09884 1462 aaPredicted RBP24.58■■□□□ 1.53
SPTAN1-205ENST00000472211 FBLN2P98095 1184 aa24.55■■□□□ 1.52
SPTAN1-205ENST00000472211 RAD54L2Q9Y4B4 1467 aa24.51■■□□□ 1.51
SPTAN1-205ENST00000472211 AEBP2Q6ZN18 517 aaPredicted RBP24.48■■□□□ 1.51
SPTAN1-205ENST00000472211 SNAPC4Q5SXM2 1469 aa24.45■■□□□ 1.51
SPTAN1-205ENST00000472211 TDRD9Q8NDG6 1382 aaKnown RBP24.43■■□□□ 1.5
SPTAN1-205ENST00000472211 SYNJ1O43426 1573 aa24.43■■□□□ 1.5
SPTAN1-205ENST00000472211 WDR97A6NE52 1622 aa24.43■■□□□ 1.5
SPTAN1-205ENST00000472211 SOGA1O94964 1423 aa24.39■■□□□ 1.5
SPTAN1-205ENST00000472211 MAGI1Q96QZ7 1491 aaPredicted RBP24.36■■□□□ 1.49
SPTAN1-205ENST00000472211 FGD5Q6ZNL6 1462 aa24.33■■□□□ 1.49
SPTAN1-205ENST00000472211 PBRM1Q86U86 1689 aa24.3■■□□□ 1.48
SPTAN1-205ENST00000472211 SYNJ2O15056 1496 aa24.29■■□□□ 1.48
SPTAN1-205ENST00000472211 GAPVD1Q14C86 1478 aa24.28■■□□□ 1.48
SPTAN1-205ENST00000472211 CHMP7Q8WUX9 453 aaPredicted RBP24.27■■□□□ 1.48
SPTAN1-205ENST00000472211 GRIN2BQ13224 1484 aa24.26■■□□□ 1.47
SPTAN1-205ENST00000472211 CUX1P39880 1505 aa24.25■■□□□ 1.47
SPTAN1-205ENST00000472211 ERCC6L2Q5T890 1561 aa24.2■■□□□ 1.46
SPTAN1-205ENST00000472211 KIF13AQ9H1H9 1805 aa24.14■■□□□ 1.46
SPTAN1-205ENST00000472211 ABCA5Q8WWZ7 1642 aa24.13■■□□□ 1.45
SPTAN1-205ENST00000472211 CEP170Q5SW79 1584 aa24.03■■□□□ 1.44
SPTAN1-205ENST00000472211 SHROOM2Q13796 1616 aa24.02■■□□□ 1.44
SPTAN1-205ENST00000472211 ABCA10Q8WWZ4 1543 aa24.02■■□□□ 1.44
SPTAN1-205ENST00000472211 GRIN2AQ12879 1464 aa24■■□□□ 1.43
SPTAN1-205ENST00000472211 ADAMTS12P58397 1594 aa23.95■■□□□ 1.43
SPTAN1-205ENST00000472211 NUP160Q12769 1436 aa23.95■■□□□ 1.42
SPTAN1-205ENST00000472211 FHAD1B1AJZ9 1412 aa23.75■■□□□ 1.39
SPTAN1-205ENST00000472211 ABCC10Q5T3U5 1492 aa23.75■■□□□ 1.39
SPTAN1-205ENST00000472211 DIP2BQ9P265 1576 aa23.74■■□□□ 1.39
SPTAN1-205ENST00000472211 BIVM-ERCC5R4GMW8 1640 aa23.74■■□□□ 1.39
SPTAN1-205ENST00000472211 PRG4Q92954 1404 aaPredicted RBP23.71■■□□□ 1.39
SPTAN1-205ENST00000472211 MAPKBP1O60336 1514 aa23.7■■□□□ 1.38
SPTAN1-205ENST00000472211 ERICH3Q5RHP9 1530 aa23.7■■□□□ 1.38
SPTAN1-205ENST00000472211 WRNQ14191 1432 aaPredicted RBP eCLIP23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms