RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 YEATS2Q9ULM3 1422 aa6.82□□□□□ -1.32
LRCH3-213ENST00000471667 NUTM2FA1L443 756 aa6.81□□□□□ -1.32
LRCH3-213ENST00000471667 LAPTM4AQ15012 233 aa6.81□□□□□ -1.32
LRCH3-213ENST00000471667 P3H3Q8IVL6 736 aa6.81□□□□□ -1.32
LRCH3-213ENST00000471667 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.81□□□□□ -1.32
LRCH3-213ENST00000471667 ADGRG1Q9Y653 693 aa6.81□□□□□ -1.32
LRCH3-213ENST00000471667 PTPRGP23470 1445 aa6.81□□□□□ -1.32
LRCH3-213ENST00000471667 MED1Q15648 1581 aaPredicted RBP6.81□□□□□ -1.32
LRCH3-213ENST00000471667 EPRSP07814 1512 aaKnown RBP6.81□□□□□ -1.32
LRCH3-213ENST00000471667 ABCA10Q8WWZ4 1543 aa6.81□□□□□ -1.32
LRCH3-213ENST00000471667 ADAMTSL3P82987 1691 aa6.81□□□□□ -1.32
LRCH3-213ENST00000471667 TTBK1Q5TCY1 1321 aaPredicted RBP6.8□□□□□ -1.32
LRCH3-213ENST00000471667 ABCA5Q8WWZ7 1642 aa6.8□□□□□ -1.32
LRCH3-213ENST00000471667 GFRA3O60609 400 aa6.8□□□□□ -1.32
LRCH3-213ENST00000471667 DNAJB2P25686 324 aa6.8□□□□□ -1.32
LRCH3-213ENST00000471667 RBM46Q8TBY0 533 aaKnown RBP6.8□□□□□ -1.32
LRCH3-213ENST00000471667 PRR14Q9BWN1 585 aa6.8□□□□□ -1.32
LRCH3-213ENST00000471667 MAP3K4Q9Y6R4 1608 aa6.79□□□□□ -1.32
LRCH3-213ENST00000471667 TMEM134Q9H6X4 195 aa6.79□□□□□ -1.32
LRCH3-213ENST00000471667 V9GY48 417 aaPredicted RBP6.79□□□□□ -1.32
LRCH3-213ENST00000471667 POGZQ7Z3K3 1410 aa6.78□□□□□ -1.32
LRCH3-213ENST00000471667 SEMA3EO15041 775 aa6.78□□□□□ -1.32
LRCH3-213ENST00000471667 ZPR1O75312 459 aa6.78□□□□□ -1.32
LRCH3-213ENST00000471667 GGCXP38435 758 aa6.78□□□□□ -1.32
LRCH3-213ENST00000471667 FAM161AQ3B820 660 aa6.78□□□□□ -1.32
LRCH3-213ENST00000471667 PCDHB3Q9Y5E6 796 aa6.78□□□□□ -1.32
LRCH3-213ENST00000471667 CFAP43Q8NDM7 1665 aa6.77□□□□□ -1.32
LRCH3-213ENST00000471667 RCCD1A6NED2 376 aa6.77□□□□□ -1.33
LRCH3-213ENST00000471667 FCHSD2O94868 740 aa6.77□□□□□ -1.33
LRCH3-213ENST00000471667 MADDQ8WXG6 1647 aa6.76□□□□□ -1.33
LRCH3-213ENST00000471667 BLOC1S3Q6QNY0 202 aa6.76□□□□□ -1.33
LRCH3-213ENST00000471667 CARMIL2Q6F5E8 1435 aa6.76□□□□□ -1.33
LRCH3-213ENST00000471667 CD109Q6YHK3 1445 aa6.76□□□□□ -1.33
LRCH3-213ENST00000471667 TMUB1Q9BVT8 246 aa6.75□□□□□ -1.33
LRCH3-213ENST00000471667 CUX1P39880 1505 aa6.75□□□□□ -1.33
LRCH3-213ENST00000471667 MAGI3Q5TCQ9 1506 aa6.75□□□□□ -1.33
LRCH3-213ENST00000471667 PTPRTO14522 1441 aa6.75□□□□□ -1.33
LRCH3-213ENST00000471667 TNIKQ9UKE5 1360 aa6.74□□□□□ -1.33
LRCH3-213ENST00000471667 BCORL1Q5H9F3 1711 aa6.74□□□□□ -1.33
LRCH3-213ENST00000471667 NRG2O14511 850 aaPredicted RBP6.74□□□□□ -1.33
LRCH3-213ENST00000471667 LCE2BO14633 110 aa6.74□□□□□ -1.33
LRCH3-213ENST00000471667 CFHP08603 1231 aa6.74□□□□□ -1.33
LRCH3-213ENST00000471667 KMT5BQ4FZB7 885 aa6.74□□□□□ -1.33
LRCH3-213ENST00000471667 RUSC2Q8N2Y8 1516 aa6.74□□□□□ -1.33
LRCH3-213ENST00000471667 PHLDB1Q86UU1 1377 aa6.73□□□□□ -1.33
LRCH3-213ENST00000471667 ERICH3Q5RHP9 1530 aa6.73□□□□□ -1.33
LRCH3-213ENST00000471667 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.73□□□□□ -1.33
LRCH3-213ENST00000471667 ACTN4O43707 911 aaKnown RBP6.73□□□□□ -1.33
LRCH3-213ENST00000471667 TLL1O43897 1013 aa6.73□□□□□ -1.33
LRCH3-213ENST00000471667 TRAF7Q6Q0C0 670 aa6.73□□□□□ -1.33
LRCH3-213ENST00000471667 RIMS1Q86UR5 1692 aaKnown RBP6.73□□□□□ -1.33
LRCH3-213ENST00000471667 UHRF1BP1LA0JNW5 1464 aa6.73□□□□□ -1.33
LRCH3-213ENST00000471667 TOM1O60784 492 aa6.72□□□□□ -1.33
LRCH3-213ENST00000471667 OATP04181 439 aa6.72□□□□□ -1.33
LRCH3-213ENST00000471667 SLC10A3P09131 477 aa6.72□□□□□ -1.33
LRCH3-213ENST00000471667 HSPA1LP34931 641 aa6.72□□□□□ -1.33
LRCH3-213ENST00000471667 HIC1Q14526 733 aa6.72□□□□□ -1.33
LRCH3-213ENST00000471667 PDZRN3Q9UPQ7 1066 aa6.72□□□□□ -1.33
LRCH3-213ENST00000471667 UACAQ9BZF9 1416 aa6.72□□□□□ -1.33
LRCH3-213ENST00000471667 CUL7Q14999 1698 aa6.71□□□□□ -1.33
LRCH3-213ENST00000471667 WRNQ14191 1432 aaPredicted RBP eCLIP6.71□□□□□ -1.34
LRCH3-213ENST00000471667 UHRF1BP1Q6BDS2 1440 aa6.71□□□□□ -1.34
LRCH3-213ENST00000471667 TESPA1A2RU30 521 aaPredicted RBP6.71□□□□□ -1.34
LRCH3-213ENST00000471667 RNF223E7ERA6 249 aa6.71□□□□□ -1.34
LRCH3-213ENST00000471667 PLCB2Q00722 1185 aa6.71□□□□□ -1.34
LRCH3-213ENST00000471667 RBM26Q5T8P6 1007 aaKnown RBP6.71□□□□□ -1.34
LRCH3-213ENST00000471667 PXYLP1Q8TE99 480 aa6.71□□□□□ -1.34
LRCH3-213ENST00000471667 PIP4K2BP78356 416 aa6.7□□□□□ -1.34
LRCH3-213ENST00000471667 METTL3Q86U44 580 aaKnown RBP6.7□□□□□ -1.34
LRCH3-213ENST00000471667 WDR7Q9Y4E6 1490 aa6.7□□□□□ -1.34
LRCH3-213ENST00000471667 ARAP3Q8WWN8 1544 aa6.7□□□□□ -1.34
LRCH3-213ENST00000471667 FANCAO15360 1455 aa6.69□□□□□ -1.34
LRCH3-213ENST00000471667 SLC19A1P41440 591 aa6.69□□□□□ -1.34
LRCH3-213ENST00000471667 SMYD5Q6GMV2 418 aa6.69□□□□□ -1.34
LRCH3-213ENST00000471667 KDM5BQ9UGL1 1544 aa6.68□□□□□ -1.34
LRCH3-213ENST00000471667 NR1I2O75469 434 aa6.68□□□□□ -1.34
LRCH3-213ENST00000471667 S1PR4O95977 384 aa6.68□□□□□ -1.34
LRCH3-213ENST00000471667 EMID1Q96A84 441 aaPredicted RBP6.68□□□□□ -1.34
LRCH3-213ENST00000471667 LTBP4Q8N2S1 1624 aa6.68□□□□□ -1.34
LRCH3-213ENST00000471667 PPEF1O14829 653 aaPredicted RBP6.67□□□□□ -1.34
LRCH3-213ENST00000471667 GNPATO15228 680 aa6.67□□□□□ -1.34
LRCH3-213ENST00000471667 ADH1BP00325 375 aa6.67□□□□□ -1.34
LRCH3-213ENST00000471667 FECHP22830 423 aa6.67□□□□□ -1.34
LRCH3-213ENST00000471667 RSPH4AQ5TD94 716 aa6.67□□□□□ -1.34
LRCH3-213ENST00000471667 ANKLE1Q8NAG6 615 aa6.67□□□□□ -1.34
LRCH3-213ENST00000471667 PREX1Q8TCU6 1659 aa6.67□□□□□ -1.34
LRCH3-213ENST00000471667 GPR37O15354 613 aa6.66□□□□□ -1.34
LRCH3-213ENST00000471667 TRIM67Q6ZTA4 783 aa6.66□□□□□ -1.34
LRCH3-213ENST00000471667 RAPGEF3O95398 923 aa6.65□□□□□ -1.34
LRCH3-213ENST00000471667 MLECQ14165 292 aa6.65□□□□□ -1.34
LRCH3-213ENST00000471667 PUS10Q3MIT2 529 aaKnown RBP6.65□□□□□ -1.34
LRCH3-213ENST00000471667 SPRYD7Q5W111 196 aa6.65□□□□□ -1.34
LRCH3-213ENST00000471667 SCUBE3Q8IX30 993 aa6.65□□□□□ -1.34
LRCH3-213ENST00000471667 AKNAQ7Z591 1439 aa6.65□□□□□ -1.35
LRCH3-213ENST00000471667 LIAT1Q6ZQX7 453 aa6.64□□□□□ -1.35
LRCH3-213ENST00000471667 FAM9AQ8IZU1 332 aaPredicted RBP6.64□□□□□ -1.35
LRCH3-213ENST00000471667 SLC6A16Q9GZN6 736 aa6.64□□□□□ -1.35
LRCH3-213ENST00000471667 DAXXQ9UER7 740 aaPredicted RBP6.64□□□□□ -1.35
LRCH3-213ENST00000471667 ZCCHC11Q5TAX3 1644 aaKnown RBP6.63□□□□□ -1.35
LRCH3-213ENST00000471667 ZNF598Q86UK7 904 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms