RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 SOS2Q07890 1332 aaPredicted RBP17.82■□□□□ 0.44
GTF3A-205ENST00000466776 COL22A1Q8NFW1 1626 aaPredicted RBP17.81■□□□□ 0.44
GTF3A-205ENST00000466776 RBM6P78332 1123 aaKnown RBP17.8■□□□□ 0.44
GTF3A-205ENST00000466776 UPF1Q92900 1129 aaKnown RBP eCLIP17.8■□□□□ 0.44
GTF3A-205ENST00000466776 ORAI2Q96SN7 254 aa17.8■□□□□ 0.44
GTF3A-205ENST00000466776 MARF1Q9Y4F3 1742 aaKnown RBP17.8■□□□□ 0.44
GTF3A-205ENST00000466776 NPHP3Q7Z494 1330 aa17.79■□□□□ 0.44
GTF3A-205ENST00000466776 RGL3Q3MIN7 710 aa17.79■□□□□ 0.44
GTF3A-205ENST00000466776 NGLY1Q96IV0 654 aa17.79■□□□□ 0.44
GTF3A-205ENST00000466776 TECPR2O15040 1411 aa17.79■□□□□ 0.44
GTF3A-205ENST00000466776 SPATA31E1Q6ZUB1 1445 aa17.79■□□□□ 0.44
GTF3A-205ENST00000466776 ADAMTS2O95450 1211 aa17.78■□□□□ 0.44
GTF3A-205ENST00000466776 MPHOSPH9Q99550 1183 aa17.78■□□□□ 0.44
GTF3A-205ENST00000466776 QTRT2Q9H974 415 aaKnown RBP17.78■□□□□ 0.44
GTF3A-205ENST00000466776 LRPPRCP42704 1394 aaKnown RBP17.78■□□□□ 0.44
GTF3A-205ENST00000466776 ADGRF5Q8IZF2 1346 aa17.77■□□□□ 0.44
GTF3A-205ENST00000466776 ESCO1Q5FWF5 840 aa17.77■□□□□ 0.44
GTF3A-205ENST00000466776 KIF1AQ12756 1690 aa17.77■□□□□ 0.43
GTF3A-205ENST00000466776 FMN2Q9NZ56 1722 aa17.75■□□□□ 0.43
GTF3A-205ENST00000466776 RGS12O14924 1447 aa17.75■□□□□ 0.43
GTF3A-205ENST00000466776 PIK3C2GO75747 1445 aa17.75■□□□□ 0.43
GTF3A-205ENST00000466776 STK26Q9P289 416 aa17.75■□□□□ 0.43
GTF3A-205ENST00000466776 ABCC11Q96J66 1382 aa17.74■□□□□ 0.43
GTF3A-205ENST00000466776 USP21Q9UK80 565 aa17.73■□□□□ 0.43
GTF3A-205ENST00000466776 TRPC5Q9UL62 973 aaPredicted RBP17.73■□□□□ 0.43
GTF3A-205ENST00000466776 PXDNQ92626 1479 aa17.72■□□□□ 0.43
GTF3A-205ENST00000466776 YTHDC2Q9H6S0 1430 aaKnown RBP17.72■□□□□ 0.43
GTF3A-205ENST00000466776 RGPD8O14715 1765 aaPredicted RBP17.71■□□□□ 0.43
GTF3A-205ENST00000466776 MYOM2P54296 1465 aa17.7■□□□□ 0.42
GTF3A-205ENST00000466776 FOXO3O43524 673 aa17.7■□□□□ 0.42
GTF3A-205ENST00000466776 WAPLQ7Z5K2 1190 aa17.7■□□□□ 0.42
GTF3A-205ENST00000466776 ATAD2Q6PL18 1390 aa17.69■□□□□ 0.42
GTF3A-205ENST00000466776 TMEM132EQ6IEE7 984 aa17.69■□□□□ 0.42
GTF3A-205ENST00000466776 FNBP4Q8N3X1 1017 aaPredicted RBP17.69■□□□□ 0.42
GTF3A-205ENST00000466776 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.69■□□□□ 0.42
GTF3A-205ENST00000466776 NUTM2FA1L443 756 aa17.68■□□□□ 0.42
GTF3A-205ENST00000466776 DHX57Q6P158 1386 aaKnown RBP17.67■□□□□ 0.42
GTF3A-205ENST00000466776 SIRT1Q96EB6 747 aa17.67■□□□□ 0.42
GTF3A-205ENST00000466776 PLEKHH1Q9ULM0 1364 aa17.66■□□□□ 0.42
GTF3A-205ENST00000466776 ATRNO75882 1429 aa17.66■□□□□ 0.42
GTF3A-205ENST00000466776 XPCQ01831 940 aaPredicted RBP17.66■□□□□ 0.42
GTF3A-205ENST00000466776 NRXN1Q9ULB1 1477 aa17.66■□□□□ 0.42
GTF3A-205ENST00000466776 C14orf93Q9H972 538 aaKnown RBP17.65■□□□□ 0.42
GTF3A-205ENST00000466776 USP32Q8NFA0 1604 aa17.63■□□□□ 0.41
GTF3A-205ENST00000466776 SPATA31A3Q5VYP0 1347 aa17.62■□□□□ 0.41
GTF3A-205ENST00000466776 DLC1Q96QB1 1528 aa17.62■□□□□ 0.41
GTF3A-205ENST00000466776 HAP1P54257 671 aaPredicted RBP17.61■□□□□ 0.41
GTF3A-205ENST00000466776 PSME1Q06323 249 aa17.61■□□□□ 0.41
GTF3A-205ENST00000466776 RAB3GAP2Q9H2M9 1393 aa17.61■□□□□ 0.41
GTF3A-205ENST00000466776 BCL9LQ86UU0 1499 aa17.61■□□□□ 0.41
GTF3A-205ENST00000466776 CFAP70Q5T0N1 1121 aa17.6■□□□□ 0.41
GTF3A-205ENST00000466776 KRT28Q7Z3Y7 464 aa17.6■□□□□ 0.41
GTF3A-205ENST00000466776 PHF8Q9UPP1 1060 aa17.6■□□□□ 0.41
GTF3A-205ENST00000466776 TNS3Q68CZ2 1445 aa17.6■□□□□ 0.41
GTF3A-205ENST00000466776 NWD2Q9ULI1 1742 aa17.59■□□□□ 0.41
GTF3A-205ENST00000466776 ADGRB2O60241 1585 aa17.59■□□□□ 0.41
GTF3A-205ENST00000466776 POGKQ9P215 609 aa17.59■□□□□ 0.41
GTF3A-205ENST00000466776 ABCA3Q99758 1704 aa17.58■□□□□ 0.41
GTF3A-205ENST00000466776 GJD4Q96KN9 370 aaPredicted RBP17.58■□□□□ 0.4
GTF3A-205ENST00000466776 PRAM1Q96QH2 718 aa17.58■□□□□ 0.4
GTF3A-205ENST00000466776 PLCH1Q4KWH8 1693 aa17.58■□□□□ 0.4
GTF3A-205ENST00000466776 ANKARQ7Z5J8 1434 aa17.57■□□□□ 0.4
GTF3A-205ENST00000466776 EIF3AQ14152 1382 aaKnown RBP17.57■□□□□ 0.4
GTF3A-205ENST00000466776 SLIT2O94813 1529 aa17.57■□□□□ 0.4
GTF3A-205ENST00000466776 ARHGEF10O15013 1369 aa17.56■□□□□ 0.4
GTF3A-205ENST00000466776 SAFB2Q14151 953 aaKnown RBP eCLIP17.56■□□□□ 0.4
GTF3A-205ENST00000466776 CCDC125Q86Z20 511 aa17.56■□□□□ 0.4
GTF3A-205ENST00000466776 UNC5CLQ8IV45 518 aa17.56■□□□□ 0.4
GTF3A-205ENST00000466776 SBNO1A3KN83 1393 aa17.55■□□□□ 0.4
GTF3A-205ENST00000466776 BRWD3Q6RI45 1802 aa17.54■□□□□ 0.4
GTF3A-205ENST00000466776 ADGRB1O14514 1584 aa17.54■□□□□ 0.4
GTF3A-205ENST00000466776 STAC3Q96MF2 364 aa17.54■□□□□ 0.4
GTF3A-205ENST00000466776 ITSN1Q15811 1721 aa17.54■□□□□ 0.4
GTF3A-205ENST00000466776 GLI3P10071 1580 aa17.53■□□□□ 0.4
GTF3A-205ENST00000466776 RALGAPBQ86X10 1494 aa17.53■□□□□ 0.4
GTF3A-205ENST00000466776 LMOD2Q6P5Q4 547 aa17.53■□□□□ 0.4
GTF3A-205ENST00000466776 EP400Q96L91 3159 aa17.52■□□□□ 0.4
GTF3A-205ENST00000466776 TRPM3Q9HCF6 1732 aaPredicted RBP17.51■□□□□ 0.39
GTF3A-205ENST00000466776 GPRASP1Q5JY77 1395 aa17.51■□□□□ 0.39
GTF3A-205ENST00000466776 TRAK1Q9UPV9 953 aa17.5■□□□□ 0.39
GTF3A-205ENST00000466776 TULP4Q9NRJ4 1543 aa17.5■□□□□ 0.39
GTF3A-205ENST00000466776 ARHGEF28Q8N1W1 1705 aaKnown RBP17.5■□□□□ 0.39
GTF3A-205ENST00000466776 ALS2Q96Q42 1657 aa17.49■□□□□ 0.39
GTF3A-205ENST00000466776 PMFBP1Q8TBY8 1022 aa17.49■□□□□ 0.39
GTF3A-205ENST00000466776 DCAF11Q8TEB1 546 aa17.49■□□□□ 0.39
GTF3A-205ENST00000466776 ZRANB1Q9UGI0 708 aa17.49■□□□□ 0.39
GTF3A-205ENST00000466776 KDM2AQ9Y2K7 1162 aa17.49■□□□□ 0.39
GTF3A-205ENST00000466776 PLEKHG5O94827 1062 aa17.48■□□□□ 0.39
GTF3A-205ENST00000466776 CABLES1Q8TDN4 633 aa17.48■□□□□ 0.39
GTF3A-205ENST00000466776 CCDC9Q9Y3X0 531 aaKnown RBP17.48■□□□□ 0.39
GTF3A-205ENST00000466776 HRCP23327 699 aa17.47■□□□□ 0.39
GTF3A-205ENST00000466776 VPS72Q15906 364 aa17.47■□□□□ 0.39
GTF3A-205ENST00000466776 COL14A1Q05707 1796 aaKnown RBP17.47■□□□□ 0.39
GTF3A-205ENST00000466776 BLMP54132 1417 aaPredicted RBP17.47■□□□□ 0.39
GTF3A-205ENST00000466776 MINK1Q8N4C8 1332 aaPredicted RBP17.47■□□□□ 0.39
GTF3A-205ENST00000466776 HIRIP3Q9BW71 556 aaPredicted RBP17.46■□□□□ 0.39
GTF3A-205ENST00000466776 NRAPQ86VF7 1730 aa17.46■□□□□ 0.39
GTF3A-205ENST00000466776 WASLO00401 505 aaPredicted RBP17.45■□□□□ 0.38
GTF3A-205ENST00000466776 SF3B2Q13435 895 aaKnown RBP17.45■□□□□ 0.38
GTF3A-205ENST00000466776 KIAA1210Q9ULL0 1709 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms