RNA–Protein interactions for RNA: ENST00000465788.1

SRM-203, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 402 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-203ENST00000465788 LRPPRCP42704 1394 aaKnown RBP19.02■□□□□ 0.64
SRM-203ENST00000465788 NPHP3Q7Z494 1330 aa19.01■□□□□ 0.63
SRM-203ENST00000465788 ORAI2Q96SN7 254 aa19.01■□□□□ 0.63
SRM-203ENST00000465788 ABCC11Q96J66 1382 aa19.01■□□□□ 0.63
SRM-203ENST00000465788 PIK3C2GO75747 1445 aa19■□□□□ 0.63
SRM-203ENST00000465788 DDX17Q92841 729 aaKnown RBP19■□□□□ 0.63
SRM-203ENST00000465788 C8orf37Q96NL8 207 aa18.99■□□□□ 0.63
SRM-203ENST00000465788 COL22A1Q8NFW1 1626 aaPredicted RBP18.98■□□□□ 0.63
SRM-203ENST00000465788 RBM6P78332 1123 aaKnown RBP18.97■□□□□ 0.63
SRM-203ENST00000465788 ESCO1Q5FWF5 840 aa18.97■□□□□ 0.63
SRM-203ENST00000465788 SIRT1Q96EB6 747 aa18.97■□□□□ 0.63
SRM-203ENST00000465788 NGLY1Q96IV0 654 aa18.97■□□□□ 0.63
SRM-203ENST00000465788 QTRT2Q9H974 415 aaKnown RBP18.96■□□□□ 0.63
SRM-203ENST00000465788 STK26Q9P289 416 aa18.96■□□□□ 0.63
SRM-203ENST00000465788 YTHDC2Q9H6S0 1430 aaKnown RBP18.95■□□□□ 0.62
SRM-203ENST00000465788 MYOM2P54296 1465 aa18.95■□□□□ 0.62
SRM-203ENST00000465788 UPF1Q92900 1129 aaKnown RBP eCLIP18.94■□□□□ 0.62
SRM-203ENST00000465788 KIF1AQ12756 1690 aa18.93■□□□□ 0.62
SRM-203ENST00000465788 ADAMTS2O95450 1211 aa18.93■□□□□ 0.62
SRM-203ENST00000465788 DHX57Q6P158 1386 aaKnown RBP18.93■□□□□ 0.62
SRM-203ENST00000465788 PXDNQ92626 1479 aa18.92■□□□□ 0.62
SRM-203ENST00000465788 NRXN1Q9ULB1 1477 aa18.92■□□□□ 0.62
SRM-203ENST00000465788 FMN2Q9NZ56 1722 aa18.92■□□□□ 0.62
SRM-203ENST00000465788 WAPLQ7Z5K2 1190 aa18.92■□□□□ 0.62
SRM-203ENST00000465788 C14orf93Q9H972 538 aaKnown RBP18.92■□□□□ 0.62
SRM-203ENST00000465788 TMEM132EQ6IEE7 984 aa18.91■□□□□ 0.62
SRM-203ENST00000465788 FNBP4Q8N3X1 1017 aaPredicted RBP18.9■□□□□ 0.62
SRM-203ENST00000465788 TRPC5Q9UL62 973 aaPredicted RBP18.9■□□□□ 0.62
SRM-203ENST00000465788 MARF1Q9Y4F3 1742 aaKnown RBP18.89■□□□□ 0.61
SRM-203ENST00000465788 FOXO3O43524 673 aa18.89■□□□□ 0.61
SRM-203ENST00000465788 USP21Q9UK80 565 aa18.89■□□□□ 0.61
SRM-203ENST00000465788 RAB3GAP2Q9H2M9 1393 aa18.89■□□□□ 0.61
SRM-203ENST00000465788 RGS12O14924 1447 aa18.89■□□□□ 0.61
SRM-203ENST00000465788 STAC3Q96MF2 364 aa18.88■□□□□ 0.61
SRM-203ENST00000465788 PLEKHH1Q9ULM0 1364 aa18.87■□□□□ 0.61
SRM-203ENST00000465788 DLC1Q96QB1 1528 aa18.86■□□□□ 0.61
SRM-203ENST00000465788 HRCP23327 699 aa18.85■□□□□ 0.61
SRM-203ENST00000465788 ATRNO75882 1429 aa18.84■□□□□ 0.61
SRM-203ENST00000465788 NUTM2FA1L443 756 aa18.84■□□□□ 0.61
SRM-203ENST00000465788 PSME1Q06323 249 aa18.84■□□□□ 0.61
SRM-203ENST00000465788 CFAP70Q5T0N1 1121 aa18.84■□□□□ 0.61
SRM-203ENST00000465788 ATAD2Q6PL18 1390 aa18.83■□□□□ 0.61
SRM-203ENST00000465788 SPATA31A3Q5VYP0 1347 aa18.83■□□□□ 0.61
SRM-203ENST00000465788 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.82■□□□□ 0.6
SRM-203ENST00000465788 ANKARQ7Z5J8 1434 aa18.82■□□□□ 0.6
SRM-203ENST00000465788 EIF3AQ14152 1382 aaKnown RBP18.81■□□□□ 0.6
SRM-203ENST00000465788 XPCQ01831 940 aaPredicted RBP18.81■□□□□ 0.6
SRM-203ENST00000465788 KRT28Q7Z3Y7 464 aa18.81■□□□□ 0.6
SRM-203ENST00000465788 POGKQ9P215 609 aa18.81■□□□□ 0.6
SRM-203ENST00000465788 PHF8Q9UPP1 1060 aa18.81■□□□□ 0.6
SRM-203ENST00000465788 RGPD8O14715 1765 aaPredicted RBP18.81■□□□□ 0.6
SRM-203ENST00000465788 PRAM1Q96QH2 718 aa18.8■□□□□ 0.6
SRM-203ENST00000465788 ADGRB2O60241 1585 aa18.8■□□□□ 0.6
SRM-203ENST00000465788 TNS3Q68CZ2 1445 aa18.79■□□□□ 0.6
SRM-203ENST00000465788 SBNO1A3KN83 1393 aa18.79■□□□□ 0.6
SRM-203ENST00000465788 BCL9LQ86UU0 1499 aa18.78■□□□□ 0.6
SRM-203ENST00000465788 ARHGEF10O15013 1369 aa18.78■□□□□ 0.6
SRM-203ENST00000465788 ADGRB1O14514 1584 aa18.77■□□□□ 0.6
SRM-203ENST00000465788 USP32Q8NFA0 1604 aa18.77■□□□□ 0.6
SRM-203ENST00000465788 HAP1P54257 671 aaPredicted RBP18.76■□□□□ 0.59
SRM-203ENST00000465788 SLIT2O94813 1529 aa18.75■□□□□ 0.59
SRM-203ENST00000465788 UNC5CLQ8IV45 518 aa18.75■□□□□ 0.59
SRM-203ENST00000465788 GJD4Q96KN9 370 aaPredicted RBP18.75■□□□□ 0.59
SRM-203ENST00000465788 SAFB2Q14151 953 aaKnown RBP eCLIP18.74■□□□□ 0.59
SRM-203ENST00000465788 CCDC125Q86Z20 511 aa18.74■□□□□ 0.59
SRM-203ENST00000465788 DCAF11Q8TEB1 546 aa18.74■□□□□ 0.59
SRM-203ENST00000465788 NWD2Q9ULI1 1742 aa18.72■□□□□ 0.59
SRM-203ENST00000465788 TRAK1Q9UPV9 953 aa18.72■□□□□ 0.59
SRM-203ENST00000465788 GPRASP1Q5JY77 1395 aa18.71■□□□□ 0.59
SRM-203ENST00000465788 KDM2AQ9Y2K7 1162 aa18.71■□□□□ 0.59
SRM-203ENST00000465788 TULP4Q9NRJ4 1543 aa18.7■□□□□ 0.58
SRM-203ENST00000465788 ABCA3Q99758 1704 aa18.69■□□□□ 0.58
SRM-203ENST00000465788 LMOD2Q6P5Q4 547 aa18.69■□□□□ 0.58
SRM-203ENST00000465788 RALGAPBQ86X10 1494 aa18.69■□□□□ 0.58
SRM-203ENST00000465788 ITSN1Q15811 1721 aa18.68■□□□□ 0.58
SRM-203ENST00000465788 PLCH1Q4KWH8 1693 aa18.67■□□□□ 0.58
SRM-203ENST00000465788 WASLO00401 505 aaPredicted RBP18.67■□□□□ 0.58
SRM-203ENST00000465788 PMFBP1Q8TBY8 1022 aa18.67■□□□□ 0.58
SRM-203ENST00000465788 MINK1Q8N4C8 1332 aaPredicted RBP18.67■□□□□ 0.58
SRM-203ENST00000465788 TRPM3Q9HCF6 1732 aaPredicted RBP18.66■□□□□ 0.58
SRM-203ENST00000465788 VPS72Q15906 364 aa18.66■□□□□ 0.58
SRM-203ENST00000465788 GLI3P10071 1580 aa18.66■□□□□ 0.58
SRM-203ENST00000465788 ARHGEF28Q8N1W1 1705 aaKnown RBP18.66■□□□□ 0.58
SRM-203ENST00000465788 KIAA1210Q9ULL0 1709 aa18.66■□□□□ 0.58
SRM-203ENST00000465788 HIRIP3Q9BW71 556 aaPredicted RBP18.65■□□□□ 0.58
SRM-203ENST00000465788 ALS2Q96Q42 1657 aa18.64■□□□□ 0.57
SRM-203ENST00000465788 CABLES1Q8TDN4 633 aa18.64■□□□□ 0.57
SRM-203ENST00000465788 NGDNQ8NEJ9 315 aaKnown RBP18.63■□□□□ 0.57
SRM-203ENST00000465788 PRR36Q9H6K5 1346 aa18.62■□□□□ 0.57
SRM-203ENST00000465788 COL14A1Q05707 1796 aaKnown RBP18.61■□□□□ 0.57
SRM-203ENST00000465788 BLMP54132 1417 aaPredicted RBP18.61■□□□□ 0.57
SRM-203ENST00000465788 ZRANB1Q9UGI0 708 aa18.61■□□□□ 0.57
SRM-203ENST00000465788 CCDC9Q9Y3X0 531 aaKnown RBP18.61■□□□□ 0.57
SRM-203ENST00000465788 BRWD3Q6RI45 1802 aa18.6■□□□□ 0.57
SRM-203ENST00000465788 ONECUT3O60422 494 aaPredicted RBP18.6■□□□□ 0.57
SRM-203ENST00000465788 SEPT12Q8IYM1 358 aa18.59■□□□□ 0.57
SRM-203ENST00000465788 EP400Q96L91 3159 aa18.59■□□□□ 0.57
SRM-203ENST00000465788 ATP7BP35670 1465 aa18.58■□□□□ 0.57
SRM-203ENST00000465788 FAM83GA6ND36 823 aa18.58■□□□□ 0.56
SRM-203ENST00000465788 SF3B2Q13435 895 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms