RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 PANK3Q9H999 370 aa14.83□□□□□ -0.04
IFT88-204ENST00000461115 PNISRQ8TF01 805 aaKnown RBP14.81□□□□□ -0.04
IFT88-204ENST00000461115 DLC1Q96QB1 1528 aa14.8□□□□□ -0.04
IFT88-204ENST00000461115 UBR1Q8IWV7 1749 aa14.8□□□□□ -0.04
IFT88-204ENST00000461115 NRXN3Q9Y4C0 1643 aa14.79□□□□□ -0.04
IFT88-204ENST00000461115 NLRP13Q86W25 1043 aa14.79□□□□□ -0.04
IFT88-204ENST00000461115 PTPRMP28827 1452 aa14.79□□□□□ -0.04
IFT88-204ENST00000461115 USP32Q8NFA0 1604 aa14.78□□□□□ -0.04
IFT88-204ENST00000461115 ZBED9Q6R2W3 1325 aa14.78□□□□□ -0.04
IFT88-204ENST00000461115 AMER1Q5JTC6 1135 aaPredicted RBP14.78□□□□□ -0.04
IFT88-204ENST00000461115 RIMS2Q9UQ26 1411 aa14.78□□□□□ -0.04
IFT88-204ENST00000461115 TULP4Q9NRJ4 1543 aa14.77□□□□□ -0.04
IFT88-204ENST00000461115 NLRP1Q9C000 1473 aa14.77□□□□□ -0.04
IFT88-204ENST00000461115 TNRQ92752 1358 aa14.77□□□□□ -0.05
IFT88-204ENST00000461115 YTHDC2Q9H6S0 1430 aaKnown RBP14.76□□□□□ -0.05
IFT88-204ENST00000461115 C3P01024 1663 aa14.76□□□□□ -0.05
IFT88-204ENST00000461115 PITPNM1O00562 1244 aa14.75□□□□□ -0.05
IFT88-204ENST00000461115 HNRNPUQ00839 825 aaKnown RBP eCLIP14.75□□□□□ -0.05
IFT88-204ENST00000461115 TMEM132EQ6IEE7 984 aa14.75□□□□□ -0.05
IFT88-204ENST00000461115 TRAK1Q9UPV9 953 aa14.75□□□□□ -0.05
IFT88-204ENST00000461115 FER1L4A9Z1Z3 1794 aa14.75□□□□□ -0.05
IFT88-204ENST00000461115 KNDC1Q76NI1 1749 aa14.75□□□□□ -0.05
IFT88-204ENST00000461115 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.75□□□□□ -0.05
IFT88-204ENST00000461115 MLECQ14165 292 aa14.74□□□□□ -0.05
IFT88-204ENST00000461115 ESF1Q9H501 851 aaKnown RBP14.74□□□□□ -0.05
IFT88-204ENST00000461115 FAM9BQ8IZU0 186 aa14.73□□□□□ -0.05
IFT88-204ENST00000461115 TMC1Q8TDI8 760 aa14.73□□□□□ -0.05
IFT88-204ENST00000461115 KNSTRNQ9Y448 316 aa14.73□□□□□ -0.05
IFT88-204ENST00000461115 ABCC11Q96J66 1382 aa14.73□□□□□ -0.05
IFT88-204ENST00000461115 NINLQ9Y2I6 1382 aa14.73□□□□□ -0.05
IFT88-204ENST00000461115 TECPR2O15040 1411 aa14.71□□□□□ -0.05
IFT88-204ENST00000461115 SSUH2Q9Y2M2 353 aa14.71□□□□□ -0.05
IFT88-204ENST00000461115 EVC2Q86UK5 1308 aa14.71□□□□□ -0.06
IFT88-204ENST00000461115 ARHGAP23Q9P227 1491 aa14.7□□□□□ -0.06
IFT88-204ENST00000461115 TMEM2Q9UHN6 1383 aa14.7□□□□□ -0.06
IFT88-204ENST00000461115 HDGFP51858 240 aaKnown RBP14.7□□□□□ -0.06
IFT88-204ENST00000461115 NUTM2DQ5VT03 806 aaPredicted RBP14.7□□□□□ -0.06
IFT88-204ENST00000461115 SPDYE1Q8NFV5 336 aaPredicted RBP14.7□□□□□ -0.06
IFT88-204ENST00000461115 SIRT1Q96EB6 747 aa14.7□□□□□ -0.06
IFT88-204ENST00000461115 SLIT1O75093 1534 aa14.7□□□□□ -0.06
IFT88-204ENST00000461115 CARD14Q9BXL6 1004 aa14.69□□□□□ -0.06
IFT88-204ENST00000461115 DNAJC5Q9H3Z4 198 aa14.69□□□□□ -0.06
IFT88-204ENST00000461115 STAG3Q9UJ98 1225 aa14.69□□□□□ -0.06
IFT88-204ENST00000461115 CLEC11AQ9Y240 323 aa14.69□□□□□ -0.06
IFT88-204ENST00000461115 MED14O60244 1454 aa14.68□□□□□ -0.06
IFT88-204ENST00000461115 CPS1P31327 1500 aa14.68□□□□□ -0.06
IFT88-204ENST00000461115 BLMP54132 1417 aaPredicted RBP14.67□□□□□ -0.06
IFT88-204ENST00000461115 ANKRD36BQ8N2N9 1353 aa14.67□□□□□ -0.06
IFT88-204ENST00000461115 FAM135BQ49AJ0 1406 aa14.67□□□□□ -0.06
IFT88-204ENST00000461115 PPP2R1AP30153 589 aa14.66□□□□□ -0.06
IFT88-204ENST00000461115 CC2D1BQ5T0F9 858 aaKnown RBP14.66□□□□□ -0.06
IFT88-204ENST00000461115 ATAD2Q6PL18 1390 aa14.65□□□□□ -0.06
IFT88-204ENST00000461115 PLEKHG1Q9ULL1 1385 aa14.65□□□□□ -0.06
IFT88-204ENST00000461115 NSD2O96028 1365 aa14.64□□□□□ -0.07
IFT88-204ENST00000461115 ADAMTS13Q76LX8 1427 aa14.64□□□□□ -0.07
IFT88-204ENST00000461115 SMG6Q86US8 1419 aaKnown RBP14.64□□□□□ -0.07
IFT88-204ENST00000461115 PIP4P2Q8N4L2 257 aa14.64□□□□□ -0.07
IFT88-204ENST00000461115 SUPT16HQ9Y5B9 1047 aaKnown RBP14.64□□□□□ -0.07
IFT88-204ENST00000461115 ADAMTSL3P82987 1691 aa14.64□□□□□ -0.07
IFT88-204ENST00000461115 ANKRD26Q9UPS8 1709 aa14.64□□□□□ -0.07
IFT88-204ENST00000461115 SLC12A5Q9H2X9 1139 aa14.62□□□□□ -0.07
IFT88-204ENST00000461115 SETD1BQ9UPS6 1966 aaKnown RBP14.62□□□□□ -0.07
IFT88-204ENST00000461115 METP08581 1390 aa14.62□□□□□ -0.07
IFT88-204ENST00000461115 NSD3Q9BZ95 1437 aa14.62□□□□□ -0.07
IFT88-204ENST00000461115 CD163L1Q9NR16 1453 aa14.62□□□□□ -0.07
IFT88-204ENST00000461115 PRAM1Q96QH2 718 aa14.61□□□□□ -0.07
IFT88-204ENST00000461115 ADGRB2O60241 1585 aa14.61□□□□□ -0.07
IFT88-204ENST00000461115 DIP2AQ14689 1571 aa14.61□□□□□ -0.07
IFT88-204ENST00000461115 POLR3AO14802 1390 aaPredicted RBP14.6□□□□□ -0.07
IFT88-204ENST00000461115 ZNF142P52746 1687 aaPredicted RBP14.6□□□□□ -0.07
IFT88-204ENST00000461115 ATP7BP35670 1465 aa14.59□□□□□ -0.07
IFT88-204ENST00000461115 STK26Q9P289 416 aa14.58□□□□□ -0.07
IFT88-204ENST00000461115 FXR2P51116 673 aaKnown RBP eCLIP14.58□□□□□ -0.08
IFT88-204ENST00000461115 PDE3BQ13370 1112 aa14.58□□□□□ -0.08
IFT88-204ENST00000461115 CNGB1Q14028 1251 aaPredicted RBP14.58□□□□□ -0.08
IFT88-204ENST00000461115 ERICH6BQ5W0A0 696 aa14.58□□□□□ -0.08
IFT88-204ENST00000461115 POGKQ9P215 609 aa14.58□□□□□ -0.08
IFT88-204ENST00000461115 RIMS1Q86UR5 1692 aaKnown RBP14.57□□□□□ -0.08
IFT88-204ENST00000461115 CGNL1Q0VF96 1302 aa14.57□□□□□ -0.08
IFT88-204ENST00000461115 RNF123Q5XPI4 1314 aa14.57□□□□□ -0.08
IFT88-204ENST00000461115 CABP2Q9NPB3 220 aa14.57□□□□□ -0.08
IFT88-204ENST00000461115 CEP170BQ9Y4F5 1589 aaPredicted RBP14.57□□□□□ -0.08
IFT88-204ENST00000461115 SHPRHQ149N8 1683 aa14.56□□□□□ -0.08
IFT88-204ENST00000461115 A0A1W2PP64 1363 aa14.56□□□□□ -0.08
IFT88-204ENST00000461115 LTKP29376 864 aa14.56□□□□□ -0.08
IFT88-204ENST00000461115 CEBPAP49715 358 aaPredicted RBP14.56□□□□□ -0.08
IFT88-204ENST00000461115 NUDCQ9Y266 331 aa14.56□□□□□ -0.08
IFT88-204ENST00000461115 PLEKHH1Q9ULM0 1364 aa14.55□□□□□ -0.08
IFT88-204ENST00000461115 CDK19Q9BWU1 502 aa14.55□□□□□ -0.08
IFT88-204ENST00000461115 KIF20BQ96Q89 1820 aa14.55□□□□□ -0.08
IFT88-204ENST00000461115 MINK1Q8N4C8 1332 aaPredicted RBP14.54□□□□□ -0.08
IFT88-204ENST00000461115 THEMISQ8N1K5 641 aaPredicted RBP14.54□□□□□ -0.08
IFT88-204ENST00000461115 TBX22Q9Y458 520 aa14.54□□□□□ -0.08
IFT88-204ENST00000461115 AKAP12Q02952 1782 aa14.53□□□□□ -0.08
IFT88-204ENST00000461115 TERF2IPQ9NYB0 399 aa14.53□□□□□ -0.08
IFT88-204ENST00000461115 CPSF1Q10570 1443 aaKnown RBP14.53□□□□□ -0.08
IFT88-204ENST00000461115 PTCH1Q13635 1447 aa14.53□□□□□ -0.08
IFT88-204ENST00000461115 MON2Q7Z3U7 1717 aa14.53□□□□□ -0.08
IFT88-204ENST00000461115 XRN1Q8IZH2 1706 aaKnown RBP14.53□□□□□ -0.08
IFT88-204ENST00000461115 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms