RNA–Protein interactions for RNA: ENST00000460606.1

AC009163.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC009163.2, Length 2,125 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009163.2-201ENST00000460606 ROBO2Q9HCK4 1378 aa23.18■■□□□ 1.3
AC009163.2-201ENST00000460606 ABCC11Q96J66 1382 aa23.18■■□□□ 1.3
AC009163.2-201ENST00000460606 KCNA6P17658 529 aa23.17■■□□□ 1.3
AC009163.2-201ENST00000460606 TMF1P82094 1093 aa23.17■■□□□ 1.3
AC009163.2-201ENST00000460606 QRICH2Q9H0J4 1663 aa23.16■■□□□ 1.3
AC009163.2-201ENST00000460606 DIP2AQ14689 1571 aa23.13■■□□□ 1.29
AC009163.2-201ENST00000460606 STRCQ7RTU9 1775 aa23.12■■□□□ 1.29
AC009163.2-201ENST00000460606 HNRNPUQ00839 825 aaKnown RBP eCLIP23.11■■□□□ 1.29
AC009163.2-201ENST00000460606 TECPR2O15040 1411 aa23.1■■□□□ 1.29
AC009163.2-201ENST00000460606 CABP2Q9NPB3 220 aa23.09■■□□□ 1.29
AC009163.2-201ENST00000460606 DLC1Q96QB1 1528 aa23.09■■□□□ 1.29
AC009163.2-201ENST00000460606 CPS1P31327 1500 aa23.08■■□□□ 1.29
AC009163.2-201ENST00000460606 CNGB1Q14028 1251 aaPredicted RBP23.08■■□□□ 1.28
AC009163.2-201ENST00000460606 SBNO2Q9Y2G9 1366 aa23.07■■□□□ 1.28
AC009163.2-201ENST00000460606 TULP4Q9NRJ4 1543 aa23.07■■□□□ 1.28
AC009163.2-201ENST00000460606 KNDC1Q76NI1 1749 aa23.07■■□□□ 1.28
AC009163.2-201ENST00000460606 SRPK2P78362 688 aaKnown RBP23.06■■□□□ 1.28
AC009163.2-201ENST00000460606 NUTM2FA1L443 756 aa23.06■■□□□ 1.28
AC009163.2-201ENST00000460606 PIK3R4Q99570 1358 aa23.06■■□□□ 1.28
AC009163.2-201ENST00000460606 EVC2Q86UK5 1308 aa23.05■■□□□ 1.28
AC009163.2-201ENST00000460606 XRN1Q8IZH2 1706 aaKnown RBP23.05■■□□□ 1.28
AC009163.2-201ENST00000460606 FAM135BQ49AJ0 1406 aa23.05■■□□□ 1.28
AC009163.2-201ENST00000460606 CHD2O14647 1828 aaKnown RBP23.05■■□□□ 1.28
AC009163.2-201ENST00000460606 ERICH6BQ5W0A0 696 aa23.04■■□□□ 1.28
AC009163.2-201ENST00000460606 CDK19Q9BWU1 502 aa23.04■■□□□ 1.28
AC009163.2-201ENST00000460606 AEBP2Q6ZN18 517 aaPredicted RBP23.03■■□□□ 1.28
AC009163.2-201ENST00000460606 TMC1Q8TDI8 760 aa23.02■■□□□ 1.28
AC009163.2-201ENST00000460606 PTCH1Q13635 1447 aa23.02■■□□□ 1.28
AC009163.2-201ENST00000460606 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.02■■□□□ 1.28
AC009163.2-201ENST00000460606 SIRT1Q96EB6 747 aa23.02■■□□□ 1.28
AC009163.2-201ENST00000460606 CDCA8Q53HL2 280 aa23■■□□□ 1.27
AC009163.2-201ENST00000460606 ZNF335Q9H4Z2 1342 aaPredicted RBP23■■□□□ 1.27
AC009163.2-201ENST00000460606 FANCIQ9NVI1 1328 aa23■■□□□ 1.27
AC009163.2-201ENST00000460606 C14orf37Q86TY3 774 aa22.99■■□□□ 1.27
AC009163.2-201ENST00000460606 PROSER2Q86WR7 435 aaPredicted RBP22.99■■□□□ 1.27
AC009163.2-201ENST00000460606 SLC12A5Q9H2X9 1139 aa22.99■■□□□ 1.27
AC009163.2-201ENST00000460606 WASLO00401 505 aaPredicted RBP22.98■■□□□ 1.27
AC009163.2-201ENST00000460606 SLC24A1O60721 1099 aa22.97■■□□□ 1.27
AC009163.2-201ENST00000460606 PANK3Q9H999 370 aa22.97■■□□□ 1.27
AC009163.2-201ENST00000460606 STRCP1A6NGW2 1772 aa22.97■■□□□ 1.27
AC009163.2-201ENST00000460606 MSH5O43196 834 aa22.94■■□□□ 1.26
AC009163.2-201ENST00000460606 NWD1Q149M9 1564 aa22.93■■□□□ 1.26
AC009163.2-201ENST00000460606 MYOM1P52179 1685 aa22.92■■□□□ 1.26
AC009163.2-201ENST00000460606 CABP1Q9NZU7 370 aa22.91■■□□□ 1.26
AC009163.2-201ENST00000460606 PRR36Q9H6K5 1346 aa22.91■■□□□ 1.26
AC009163.2-201ENST00000460606 IRX6P78412 446 aaPredicted RBP22.91■■□□□ 1.26
AC009163.2-201ENST00000460606 BCL11AQ9H165 835 aa22.91■■□□□ 1.26
AC009163.2-201ENST00000460606 NUDT16Q96DE0 195 aaKnown RBP22.9■■□□□ 1.26
AC009163.2-201ENST00000460606 PPP4R2Q9NY27 417 aa22.9■■□□□ 1.26
AC009163.2-201ENST00000460606 TMEM94Q12767 1356 aa22.9■■□□□ 1.26
AC009163.2-201ENST00000460606 DMRT2Q9Y5R5 561 aa22.9■■□□□ 1.26
AC009163.2-201ENST00000460606 NALCNQ8IZF0 1738 aa22.89■■□□□ 1.25
AC009163.2-201ENST00000460606 PRKRIP1Q9H875 184 aaPredicted RBP22.88■■□□□ 1.25
AC009163.2-201ENST00000460606 NKTRP30414 1462 aaKnown RBP22.86■■□□□ 1.25
AC009163.2-201ENST00000460606 ATAD2Q6PL18 1390 aa22.86■■□□□ 1.25
AC009163.2-201ENST00000460606 CARD14Q9BXL6 1004 aa22.86■■□□□ 1.25
AC009163.2-201ENST00000460606 CCDC184Q52MB2 194 aa22.85■■□□□ 1.25
AC009163.2-201ENST00000460606 ADGRB2O60241 1585 aa22.85■■□□□ 1.25
AC009163.2-201ENST00000460606 PER1O15534 1290 aaPredicted RBP22.85■■□□□ 1.25
AC009163.2-201ENST00000460606 ADGRL3Q9HAR2 1447 aa22.85■■□□□ 1.25
AC009163.2-201ENST00000460606 ZBED9Q6R2W3 1325 aa22.85■■□□□ 1.25
AC009163.2-201ENST00000460606 ATP7BP35670 1465 aa22.84■■□□□ 1.25
AC009163.2-201ENST00000460606 PPIP5K1Q6PFW1 1433 aa22.84■■□□□ 1.25
AC009163.2-201ENST00000460606 PMFBP1Q8TBY8 1022 aa22.84■■□□□ 1.25
AC009163.2-201ENST00000460606 CC2D1BQ5T0F9 858 aaKnown RBP22.83■■□□□ 1.25
AC009163.2-201ENST00000460606 PUS7Q96PZ0 661 aaKnown RBP22.83■■□□□ 1.25
AC009163.2-201ENST00000460606 CCDC61Q9Y6R9 512 aa22.83■■□□□ 1.25
AC009163.2-201ENST00000460606 KNSTRNQ9Y448 316 aa22.81■■□□□ 1.24
AC009163.2-201ENST00000460606 A0A1W2PP64 1363 aa22.81■■□□□ 1.24
AC009163.2-201ENST00000460606 MRS2Q9HD23 443 aa22.8■■□□□ 1.24
AC009163.2-201ENST00000460606 USP32Q8NFA0 1604 aa22.79■■□□□ 1.24
AC009163.2-201ENST00000460606 LRRC7Q96NW7 1537 aa22.79■■□□□ 1.24
AC009163.2-201ENST00000460606 C19orf44Q9H6X5 657 aa22.79■■□□□ 1.24
AC009163.2-201ENST00000460606 RGPD8O14715 1765 aaPredicted RBP22.79■■□□□ 1.24
AC009163.2-201ENST00000460606 CD163L1Q9NR16 1453 aa22.79■■□□□ 1.24
AC009163.2-201ENST00000460606 NSD3Q9BZ95 1437 aa22.79■■□□□ 1.24
AC009163.2-201ENST00000460606 FAM9BQ8IZU0 186 aa22.78■■□□□ 1.24
AC009163.2-201ENST00000460606 ANKRD36BQ8N2N9 1353 aa22.77■■□□□ 1.24
AC009163.2-201ENST00000460606 CDC42BPGQ6DT37 1551 aa22.77■■□□□ 1.23
AC009163.2-201ENST00000460606 ERICH6Q7L0X2 663 aa22.76■■□□□ 1.23
AC009163.2-201ENST00000460606 ESCO1Q5FWF5 840 aa22.76■■□□□ 1.23
AC009163.2-201ENST00000460606 TERF2IPQ9NYB0 399 aa22.76■■□□□ 1.23
AC009163.2-201ENST00000460606 ATF3P18847 181 aa22.75■■□□□ 1.23
AC009163.2-201ENST00000460606 ORAI2Q96SN7 254 aa22.75■■□□□ 1.23
AC009163.2-201ENST00000460606 FMN2Q9NZ56 1722 aa22.75■■□□□ 1.23
AC009163.2-201ENST00000460606 XIRP1Q702N8 1843 aaKnown RBP22.75■■□□□ 1.23
AC009163.2-201ENST00000460606 ACEP12821 1306 aa22.75■■□□□ 1.23
AC009163.2-201ENST00000460606 HDGFL2Q7Z4V5 671 aaPredicted RBP22.75■■□□□ 1.23
AC009163.2-201ENST00000460606 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.75■■□□□ 1.23
AC009163.2-201ENST00000460606 AMER1Q5JTC6 1135 aaPredicted RBP22.74■■□□□ 1.23
AC009163.2-201ENST00000460606 NINLQ9Y2I6 1382 aa22.73■■□□□ 1.23
AC009163.2-201ENST00000460606 MSH6P52701 1360 aa22.73■■□□□ 1.23
AC009163.2-201ENST00000460606 NGDNQ8NEJ9 315 aaKnown RBP22.72■■□□□ 1.23
AC009163.2-201ENST00000460606 KTN1Q86UP2 1357 aaKnown RBP22.72■■□□□ 1.23
AC009163.2-201ENST00000460606 TOPAZ1Q8N9V7 1692 aa22.7■■□□□ 1.22
AC009163.2-201ENST00000460606 PLEKHG3A1L390 1219 aa22.69■■□□□ 1.22
AC009163.2-201ENST00000460606 CPSF1Q10570 1443 aaKnown RBP22.69■■□□□ 1.22
AC009163.2-201ENST00000460606 ANKARQ7Z5J8 1434 aa22.69■■□□□ 1.22
AC009163.2-201ENST00000460606 TNNT2P45379 298 aaPredicted RBP22.69■■□□□ 1.22
AC009163.2-201ENST00000460606 XPCQ01831 940 aaPredicted RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms