RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 PPLO60437 1756 aa10.86□□□□□ -0.67
ABCA4-202ENST00000460514 NEXMIFQ5QGS0 1516 aa10.86□□□□□ -0.67
ABCA4-202ENST00000460514 TXNDC2Q86VQ3 553 aa10.86□□□□□ -0.67
ABCA4-202ENST00000460514 SCAF11Q99590 1463 aaKnown RBP10.86□□□□□ -0.67
ABCA4-202ENST00000460514 IFT172Q9UG01 1749 aa10.85□□□□□ -0.67
ABCA4-202ENST00000460514 KDM2AQ9Y2K7 1162 aa10.85□□□□□ -0.67
ABCA4-202ENST00000460514 BCANQ96GW7 911 aa10.83□□□□□ -0.68
ABCA4-202ENST00000460514 PLEKHG1Q9ULL1 1385 aa10.82□□□□□ -0.68
ABCA4-202ENST00000460514 POLR1AO95602 1720 aaPredicted RBP10.82□□□□□ -0.68
ABCA4-202ENST00000460514 ATMINO43313 823 aaPredicted RBP10.82□□□□□ -0.68
ABCA4-202ENST00000460514 NUTM2DQ5VT03 806 aaPredicted RBP10.82□□□□□ -0.68
ABCA4-202ENST00000460514 PRAG1Q86YV5 1406 aa10.82□□□□□ -0.68
ABCA4-202ENST00000460514 NRXN1Q9ULB1 1477 aa10.81□□□□□ -0.68
ABCA4-202ENST00000460514 LTKP29376 864 aa10.81□□□□□ -0.68
ABCA4-202ENST00000460514 HSPA2P54652 639 aa10.81□□□□□ -0.68
ABCA4-202ENST00000460514 ADGRF5Q8IZF2 1346 aa10.81□□□□□ -0.68
ABCA4-202ENST00000460514 LAMC1P11047 1609 aa10.8□□□□□ -0.68
ABCA4-202ENST00000460514 PIK3C2GO75747 1445 aa10.8□□□□□ -0.68
ABCA4-202ENST00000460514 SETBP1Q9Y6X0 1596 aa10.8□□□□□ -0.68
ABCA4-202ENST00000460514 MED14O60244 1454 aa10.8□□□□□ -0.68
ABCA4-202ENST00000460514 DIP2AQ14689 1571 aa10.79□□□□□ -0.68
ABCA4-202ENST00000460514 NPHP4O75161 1426 aaPredicted RBP10.79□□□□□ -0.68
ABCA4-202ENST00000460514 NCKAP5LQ9HCH0 1330 aa10.79□□□□□ -0.68
ABCA4-202ENST00000460514 KIAA1210Q9ULL0 1709 aa10.78□□□□□ -0.68
ABCA4-202ENST00000460514 SPNS2Q8IVW8 549 aa10.78□□□□□ -0.68
ABCA4-202ENST00000460514 C14orf93Q9H972 538 aaKnown RBP10.78□□□□□ -0.68
ABCA4-202ENST00000460514 IQGAP1P46940 1657 aa10.78□□□□□ -0.68
ABCA4-202ENST00000460514 TBX22Q9Y458 520 aa10.77□□□□□ -0.69
ABCA4-202ENST00000460514 ALKQ9UM73 1620 aa10.76□□□□□ -0.69
ABCA4-202ENST00000460514 RALGAPBQ86X10 1494 aa10.76□□□□□ -0.69
ABCA4-202ENST00000460514 NBPF8Q3BBV2 869 aa10.76□□□□□ -0.69
ABCA4-202ENST00000460514 CFAP70Q5T0N1 1121 aa10.76□□□□□ -0.69
ABCA4-202ENST00000460514 CREBZFQ9NS37 354 aa10.76□□□□□ -0.69
ABCA4-202ENST00000460514 ROCK2O75116 1388 aaKnown RBP10.76□□□□□ -0.69
ABCA4-202ENST00000460514 PIK3R4Q99570 1358 aa10.76□□□□□ -0.69
ABCA4-202ENST00000460514 TRPM1Q7Z4N2 1603 aa10.75□□□□□ -0.69
ABCA4-202ENST00000460514 STRCQ7RTU9 1775 aa10.75□□□□□ -0.69
ABCA4-202ENST00000460514 ADAMTS13Q76LX8 1427 aa10.75□□□□□ -0.69
ABCA4-202ENST00000460514 NRXN3Q9Y4C0 1643 aa10.74□□□□□ -0.69
ABCA4-202ENST00000460514 SLC26A8Q96RN1 970 aa10.74□□□□□ -0.69
ABCA4-202ENST00000460514 CARD11Q9BXL7 1154 aa10.73□□□□□ -0.69
ABCA4-202ENST00000460514 GPRASP1Q5JY77 1395 aa10.73□□□□□ -0.69
ABCA4-202ENST00000460514 MS4A3Q96HJ5 214 aa10.72□□□□□ -0.69
ABCA4-202ENST00000460514 EIF3AQ14152 1382 aaKnown RBP10.72□□□□□ -0.69
ABCA4-202ENST00000460514 SETD1AO15047 1707 aaKnown RBP10.71□□□□□ -0.69
ABCA4-202ENST00000460514 LRPPRCP42704 1394 aaKnown RBP10.71□□□□□ -0.69
ABCA4-202ENST00000460514 NBPF1Q3BBV0 1214 aa10.71□□□□□ -0.69
ABCA4-202ENST00000460514 YTHDC2Q9H6S0 1430 aaKnown RBP10.71□□□□□ -0.69
ABCA4-202ENST00000460514 ADGRB1O14514 1584 aa10.7□□□□□ -0.7
ABCA4-202ENST00000460514 METP08581 1390 aa10.7□□□□□ -0.7
ABCA4-202ENST00000460514 ABCC11Q96J66 1382 aa10.7□□□□□ -0.7
ABCA4-202ENST00000460514 TMEM132EQ6IEE7 984 aa10.7□□□□□ -0.7
ABCA4-202ENST00000460514 SLC24A1O60721 1099 aa10.69□□□□□ -0.7
ABCA4-202ENST00000460514 KCNA6P17658 529 aa10.69□□□□□ -0.7
ABCA4-202ENST00000460514 ASXL1Q8IXJ9 1541 aa10.68□□□□□ -0.7
ABCA4-202ENST00000460514 KNDC1Q76NI1 1749 aa10.68□□□□□ -0.7
ABCA4-202ENST00000460514 EIF4G2P78344 907 aaKnown RBP eCLIP10.68□□□□□ -0.7
ABCA4-202ENST00000460514 SIRT1Q96EB6 747 aa10.68□□□□□ -0.7
ABCA4-202ENST00000460514 STK26Q9P289 416 aa10.68□□□□□ -0.7
ABCA4-202ENST00000460514 AMOTL2Q9Y2J4 779 aa10.68□□□□□ -0.7
ABCA4-202ENST00000460514 DLC1Q96QB1 1528 aa10.68□□□□□ -0.7
ABCA4-202ENST00000460514 CHD2O14647 1828 aaKnown RBP10.68□□□□□ -0.7
ABCA4-202ENST00000460514 TECPR2O15040 1411 aa10.67□□□□□ -0.7
ABCA4-202ENST00000460514 USP47Q96K76 1375 aa10.67□□□□□ -0.7
ABCA4-202ENST00000460514 POGKQ9P215 609 aa10.67□□□□□ -0.7
ABCA4-202ENST00000460514 TRAK1Q9UPV9 953 aa10.67□□□□□ -0.7
ABCA4-202ENST00000460514 NWD1Q149M9 1564 aa10.67□□□□□ -0.7
ABCA4-202ENST00000460514 NKTRP30414 1462 aaKnown RBP10.67□□□□□ -0.7
ABCA4-202ENST00000460514 PTCH1Q13635 1447 aa10.67□□□□□ -0.7
ABCA4-202ENST00000460514 FAM135BQ49AJ0 1406 aa10.67□□□□□ -0.7
ABCA4-202ENST00000460514 CPS1P31327 1500 aa10.66□□□□□ -0.7
ABCA4-202ENST00000460514 XRN1Q8IZH2 1706 aaKnown RBP10.66□□□□□ -0.7
ABCA4-202ENST00000460514 PTPRUQ92729 1446 aa10.66□□□□□ -0.7
ABCA4-202ENST00000460514 CENPJQ9HC77 1338 aaPredicted RBP10.64□□□□□ -0.71
ABCA4-202ENST00000460514 ST18O60284 1047 aa10.64□□□□□ -0.71
ABCA4-202ENST00000460514 ATN1P54259 1190 aaPredicted RBP10.64□□□□□ -0.71
ABCA4-202ENST00000460514 PRAM1Q96QH2 718 aa10.64□□□□□ -0.71
ABCA4-202ENST00000460514 ARHGEF28Q8N1W1 1705 aaKnown RBP10.64□□□□□ -0.71
ABCA4-202ENST00000460514 POTEFA5A3E0 1075 aa10.63□□□□□ -0.71
ABCA4-202ENST00000460514 PROSER2Q86WR7 435 aaPredicted RBP10.63□□□□□ -0.71
ABCA4-202ENST00000460514 NCOA3Q9Y6Q9 1424 aa10.63□□□□□ -0.71
ABCA4-202ENST00000460514 ROBO2Q9HCK4 1378 aa10.63□□□□□ -0.71
ABCA4-202ENST00000460514 ZNF335Q9H4Z2 1342 aaPredicted RBP10.62□□□□□ -0.71
ABCA4-202ENST00000460514 ST20-MTHFSA0A0A6YYL1 179 aa10.62□□□□□ -0.71
ABCA4-202ENST00000460514 HSPA5P11021 654 aaKnown RBP10.62□□□□□ -0.71
ABCA4-202ENST00000460514 SBNO2Q9Y2G9 1366 aa10.62□□□□□ -0.71
ABCA4-202ENST00000460514 C14orf37Q86TY3 774 aa10.61□□□□□ -0.71
ABCA4-202ENST00000460514 QRICH2Q9H0J4 1663 aa10.6□□□□□ -0.71
ABCA4-202ENST00000460514 TMF1P82094 1093 aa10.6□□□□□ -0.71
ABCA4-202ENST00000460514 SAFB2Q14151 953 aaKnown RBP eCLIP10.6□□□□□ -0.71
ABCA4-202ENST00000460514 CDCA8Q53HL2 280 aa10.6□□□□□ -0.71
ABCA4-202ENST00000460514 WAPLQ7Z5K2 1190 aa10.6□□□□□ -0.71
ABCA4-202ENST00000460514 TMEM94Q12767 1356 aa10.59□□□□□ -0.71
ABCA4-202ENST00000460514 STRCP1A6NGW2 1772 aa10.59□□□□□ -0.71
ABCA4-202ENST00000460514 EVC2Q86UK5 1308 aa10.58□□□□□ -0.71
ABCA4-202ENST00000460514 MINK1Q8N4C8 1332 aaPredicted RBP10.58□□□□□ -0.71
ABCA4-202ENST00000460514 MSH6P52701 1360 aa10.58□□□□□ -0.72
ABCA4-202ENST00000460514 PLEKHH1Q9ULM0 1364 aa10.58□□□□□ -0.72
ABCA4-202ENST00000460514 SPDYE4A6NLX3 237 aa10.58□□□□□ -0.72
ABCA4-202ENST00000460514 LRRC7Q96NW7 1537 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms