RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 XRN1Q8IZH2 1706 aaKnown RBP33.41■■■□□ 2.94
U2AF1-204ENST00000459639 PTPRUQ92729 1446 aa33.41■■■□□ 2.94
U2AF1-204ENST00000459639 WAPLQ7Z5K2 1190 aa33.39■■■□□ 2.94
U2AF1-204ENST00000459639 PIK3R4Q99570 1358 aa33.39■■■□□ 2.94
U2AF1-204ENST00000459639 NINLQ9Y2I6 1382 aa33.37■■■□□ 2.93
U2AF1-204ENST00000459639 PTCH1Q13635 1447 aa33.37■■■□□ 2.93
U2AF1-204ENST00000459639 ATAD2Q6PL18 1390 aa33.36■■■□□ 2.93
U2AF1-204ENST00000459639 ROBO2Q9HCK4 1378 aa33.36■■■□□ 2.93
U2AF1-204ENST00000459639 RALBP1Q15311 655 aa33.36■■■□□ 2.93
U2AF1-204ENST00000459639 ADGRB2O60241 1585 aa33.36■■■□□ 2.93
U2AF1-204ENST00000459639 PARD3Q8TEW0 1356 aa33.35■■■□□ 2.93
U2AF1-204ENST00000459639 YTHDC1Q96MU7 727 aaKnown RBP33.34■■■□□ 2.93
U2AF1-204ENST00000459639 KNSTRNQ9Y448 316 aa33.34■■■□□ 2.93
U2AF1-204ENST00000459639 CABP2Q9NPB3 220 aa33.33■■■□□ 2.93
U2AF1-204ENST00000459639 SRPK2P78362 688 aaKnown RBP33.33■■■□□ 2.93
U2AF1-204ENST00000459639 CHD2O14647 1828 aaKnown RBP33.32■■■□□ 2.92
U2AF1-204ENST00000459639 NPC1L1Q9UHC9 1359 aa33.32■■■□□ 2.92
U2AF1-204ENST00000459639 NPHP4O75161 1426 aaPredicted RBP33.31■■■□□ 2.92
U2AF1-204ENST00000459639 USP32Q8NFA0 1604 aa33.3■■■□□ 2.92
U2AF1-204ENST00000459639 KDM4FA0A1W2PPD8 638 aa33.3■■■□□ 2.92
U2AF1-204ENST00000459639 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.3■■■□□ 2.92
U2AF1-204ENST00000459639 TMC1Q8TDI8 760 aa33.29■■■□□ 2.92
U2AF1-204ENST00000459639 CDK19Q9BWU1 502 aa33.29■■■□□ 2.92
U2AF1-204ENST00000459639 AMOTL2Q9Y2J4 779 aa33.29■■■□□ 2.92
U2AF1-204ENST00000459639 SLC12A5Q9H2X9 1139 aa33.28■■■□□ 2.92
U2AF1-204ENST00000459639 ANKRD36BQ8N2N9 1353 aa33.27■■■□□ 2.92
U2AF1-204ENST00000459639 CNGB1Q14028 1251 aaPredicted RBP33.27■■■□□ 2.92
U2AF1-204ENST00000459639 MYBBP1AQ9BQG0 1328 aaKnown RBP33.27■■■□□ 2.92
U2AF1-204ENST00000459639 AMER1Q5JTC6 1135 aaPredicted RBP33.26■■■□□ 2.92
U2AF1-204ENST00000459639 WASLO00401 505 aaPredicted RBP33.23■■■□□ 2.91
U2AF1-204ENST00000459639 CARD14Q9BXL6 1004 aa33.23■■■□□ 2.91
U2AF1-204ENST00000459639 CC2D1BQ5T0F9 858 aaKnown RBP33.23■■■□□ 2.91
U2AF1-204ENST00000459639 MRS2Q9HD23 443 aa33.23■■■□□ 2.91
U2AF1-204ENST00000459639 CCDC184Q52MB2 194 aa33.22■■■□□ 2.91
U2AF1-204ENST00000459639 NSD3Q9BZ95 1437 aa33.21■■■□□ 2.91
U2AF1-204ENST00000459639 CENPBP07199 599 aaPredicted RBP33.2■■■□□ 2.9
U2AF1-204ENST00000459639 BRD4O60885 1362 aaPredicted RBP33.19■■■□□ 2.9
U2AF1-204ENST00000459639 ATP7BP35670 1465 aa33.17■■■□□ 2.9
U2AF1-204ENST00000459639 NCKAP5LQ9HCH0 1330 aa33.17■■■□□ 2.9
U2AF1-204ENST00000459639 CD163L1Q9NR16 1453 aa33.16■■■□□ 2.9
U2AF1-204ENST00000459639 A0A1W2PP64 1363 aa33.15■■■□□ 2.9
U2AF1-204ENST00000459639 NWD1Q149M9 1564 aa33.15■■■□□ 2.9
U2AF1-204ENST00000459639 KCNA6P17658 529 aa33.14■■■□□ 2.9
U2AF1-204ENST00000459639 NLRP13Q86W25 1043 aa33.14■■■□□ 2.9
U2AF1-204ENST00000459639 TOPAZ1Q8N9V7 1692 aa33.14■■■□□ 2.9
U2AF1-204ENST00000459639 TERF2IPQ9NYB0 399 aa33.13■■■□□ 2.89
U2AF1-204ENST00000459639 LMTK3Q96Q04 1460 aa33.12■■■□□ 2.89
U2AF1-204ENST00000459639 ITSN1Q15811 1721 aa33.09■■■□□ 2.89
U2AF1-204ENST00000459639 PPIP5K1Q6PFW1 1433 aa33.09■■■□□ 2.89
U2AF1-204ENST00000459639 CDC42BPGQ6DT37 1551 aa33.08■■■□□ 2.89
U2AF1-204ENST00000459639 NSD2O96028 1365 aa33.08■■■□□ 2.89
U2AF1-204ENST00000459639 CABP1Q9NZU7 370 aa33.08■■■□□ 2.89
U2AF1-204ENST00000459639 CGNL1Q0VF96 1302 aa33.08■■■□□ 2.89
U2AF1-204ENST00000459639 HDGFL2Q7Z4V5 671 aaPredicted RBP33.07■■■□□ 2.89
U2AF1-204ENST00000459639 NUDT16Q96DE0 195 aaKnown RBP33.07■■■□□ 2.89
U2AF1-204ENST00000459639 AKAP12Q02952 1782 aa33.07■■■□□ 2.88
U2AF1-204ENST00000459639 NALCNQ8IZF0 1738 aa33.07■■■□□ 2.88
U2AF1-204ENST00000459639 ANKRD26Q9UPS8 1709 aa33.07■■■□□ 2.88
U2AF1-204ENST00000459639 MON2Q7Z3U7 1717 aa33.05■■■□□ 2.88
U2AF1-204ENST00000459639 CCDC61Q9Y6R9 512 aa33.04■■■□□ 2.88
U2AF1-204ENST00000459639 KIF20BQ96Q89 1820 aa33.04■■■□□ 2.88
U2AF1-204ENST00000459639 FMN2Q9NZ56 1722 aa33.04■■■□□ 2.88
U2AF1-204ENST00000459639 PRR36Q9H6K5 1346 aa33.03■■■□□ 2.88
U2AF1-204ENST00000459639 CPSF1Q10570 1443 aaKnown RBP33.03■■■□□ 2.88
U2AF1-204ENST00000459639 PPP2R1AP30153 589 aa33.01■■■□□ 2.87
U2AF1-204ENST00000459639 NKTRP30414 1462 aaKnown RBP32.99■■■□□ 2.87
U2AF1-204ENST00000459639 FAM9BQ8IZU0 186 aa32.99■■■□□ 2.87
U2AF1-204ENST00000459639 HSPA2P54652 639 aa32.98■■■□□ 2.87
U2AF1-204ENST00000459639 PNISRQ8TF01 805 aaKnown RBP32.98■■■□□ 2.87
U2AF1-204ENST00000459639 STRCQ7RTU9 1775 aa32.98■■■□□ 2.87
U2AF1-204ENST00000459639 ANKARQ7Z5J8 1434 aa32.97■■■□□ 2.87
U2AF1-204ENST00000459639 RGPD8O14715 1765 aaPredicted RBP32.95■■■□□ 2.87
U2AF1-204ENST00000459639 EDC4Q6P2E9 1401 aaKnown RBP32.95■■■□□ 2.87
U2AF1-204ENST00000459639 ADGRL3Q9HAR2 1447 aa32.95■■■□□ 2.87
U2AF1-204ENST00000459639 MORC1Q86VD1 984 aa32.94■■■□□ 2.86
U2AF1-204ENST00000459639 NRKQ7Z2Y5 1582 aa32.91■■■□□ 2.86
U2AF1-204ENST00000459639 PLEKHG3A1L390 1219 aa32.91■■■□□ 2.86
U2AF1-204ENST00000459639 ZNF692Q9BU19 519 aaPredicted RBP32.89■■■□□ 2.86
U2AF1-204ENST00000459639 STRCP1A6NGW2 1772 aa32.89■■■□□ 2.86
U2AF1-204ENST00000459639 FYB1O15117 783 aa32.86■■■□□ 2.85
U2AF1-204ENST00000459639 HNRNPUQ00839 825 aaKnown RBP eCLIP32.86■■■□□ 2.85
U2AF1-204ENST00000459639 NUTM2FA1L443 756 aa32.85■■■□□ 2.85
U2AF1-204ENST00000459639 INSRP06213 1382 aa32.84■■■□□ 2.85
U2AF1-204ENST00000459639 ACEP12821 1306 aa32.82■■■□□ 2.84
U2AF1-204ENST00000459639 GGNBP2Q9H3C7 697 aa32.82■■■□□ 2.84
U2AF1-204ENST00000459639 POLR3AO14802 1390 aaPredicted RBP32.81■■■□□ 2.84
U2AF1-204ENST00000459639 USP6P35125 1406 aa32.81■■■□□ 2.84
U2AF1-204ENST00000459639 PROSER2Q86WR7 435 aaPredicted RBP32.79■■■□□ 2.84
U2AF1-204ENST00000459639 NCOA3Q9Y6Q9 1424 aa32.78■■■□□ 2.84
U2AF1-204ENST00000459639 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.78■■■□□ 2.84
U2AF1-204ENST00000459639 RBM33Q96EV2 1170 aaKnown RBP32.76■■■□□ 2.84
U2AF1-204ENST00000459639 TNNT2P45379 298 aaPredicted RBP32.75■■■□□ 2.83
U2AF1-204ENST00000459639 C14orf37Q86TY3 774 aa32.75■■■□□ 2.83
U2AF1-204ENST00000459639 SSH2Q76I76 1423 aa32.74■■■□□ 2.83
U2AF1-204ENST00000459639 BLMP54132 1417 aaPredicted RBP32.73■■■□□ 2.83
U2AF1-204ENST00000459639 SHPRHQ149N8 1683 aa32.73■■■□□ 2.83
U2AF1-204ENST00000459639 ZBED9Q6R2W3 1325 aa32.72■■■□□ 2.83
U2AF1-204ENST00000459639 SCAF1Q9H7N4 1312 aaKnown RBP32.71■■■□□ 2.83
U2AF1-204ENST00000459639 PMFBP1Q8TBY8 1022 aa32.71■■■□□ 2.83
U2AF1-204ENST00000459639 TTC21BQ7Z4L5 1316 aa32.7■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms