RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-208ENST00000456331 IFIT2P09913 472 aaKnown RBP4.82□□□□□ -1.64
PPP1R9A-208ENST00000456331 EPS15P42566 896 aa4.82□□□□□ -1.64
PPP1R9A-208ENST00000456331 GZF1Q9H116 711 aaPredicted RBP4.82□□□□□ -1.64
PPP1R9A-208ENST00000456331 R3HCC1Q9Y3T6 440 aaKnown RBP4.82□□□□□ -1.64
PPP1R9A-208ENST00000456331 CT47A1Q5JQC4 288 aaPredicted RBP4.82□□□□□ -1.64
PPP1R9A-208ENST00000456331 STIM1Q13586 685 aa4.82□□□□□ -1.64
PPP1R9A-208ENST00000456331 DZIP1LQ8IYY4 767 aaKnown RBP4.82□□□□□ -1.64
PPP1R9A-208ENST00000456331 TTC5Q8N0Z6 440 aa4.82□□□□□ -1.64
PPP1R9A-208ENST00000456331 RTN4Q9NQC3 1192 aaKnown RBP4.82□□□□□ -1.64
PPP1R9A-208ENST00000456331 H0YHG0 523 aa4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 CAVIN2O95810 425 aa4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 GNAI3P08754 354 aa4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 TEFQ10587 303 aa4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 PDE3AQ14432 1141 aa4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 RALYLQ86SE5 291 aaKnown RBP4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 DDX12PQ92771 950 aa4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 PCMTD1Q96MG8 357 aaPredicted RBP4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 EZRP15311 586 aaKnown RBP4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 G3BP1Q13283 466 aaKnown RBP eCLIP4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 CNTROBQ8N137 903 aa4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 CDC45O75419 566 aa4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 CHMP3Q9Y3E7 222 aa4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 TSHZ2Q9NRE2 1034 aa4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 GOLGA6L10A0A0M3HER8 536 aa4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 SMC2O95347 1197 aa4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 ANKRD45Q5TZF3 282 aa4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 ZSCAN25Q6NSZ9 544 aa4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 BICD2Q8TD16 824 aa4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 C9orf78Q9NZ63 289 aaPredicted RBP4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 USP47Q96K76 1375 aa4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 POLA1P09884 1462 aaPredicted RBP4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 TUBB4AP04350 444 aa4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 TPRNQ4KMQ1 711 aa4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 NGDNQ8NEJ9 315 aaKnown RBP4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 PNISRQ8TF01 805 aaKnown RBP4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 PRKRIP1Q9H875 184 aaPredicted RBP4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 CDKL5O76039 1030 aa4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 GTF2E1P29083 439 aaPredicted RBP4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 KINO60870 393 aaKnown RBP4.81□□□□□ -1.64
PPP1R9A-208ENST00000456331 DHX57Q6P158 1386 aaKnown RBP4.8□□□□□ -1.64
PPP1R9A-208ENST00000456331 KIAA0754O94854 1291 aa4.8□□□□□ -1.64
PPP1R9A-208ENST00000456331 NASPP49321 788 aaPredicted RBP4.8□□□□□ -1.64
PPP1R9A-208ENST00000456331 DDX11Q96FC9 970 aa4.8□□□□□ -1.64
PPP1R9A-208ENST00000456331 MAGEC2Q9UBF1 373 aaPredicted RBP4.8□□□□□ -1.64
PPP1R9A-208ENST00000456331 SMG6Q86US8 1419 aaKnown RBP4.8□□□□□ -1.64
PPP1R9A-208ENST00000456331 OFD1O75665 1012 aa4.8□□□□□ -1.64
PPP1R9A-208ENST00000456331 CFAP45Q9UL16 551 aa4.8□□□□□ -1.64
PPP1R9A-208ENST00000456331 SYCP1Q15431 976 aa4.8□□□□□ -1.64
PPP1R9A-208ENST00000456331 RRP9O43818 475 aaKnown RBP4.8□□□□□ -1.64
PPP1R9A-208ENST00000456331 PYM1Q9BRP8 204 aaKnown RBP4.8□□□□□ -1.64
PPP1R9A-208ENST00000456331 AKNAQ7Z591 1439 aa4.8□□□□□ -1.64
PPP1R9A-208ENST00000456331 SMARCA4P51532 1647 aa4.8□□□□□ -1.64
PPP1R9A-208ENST00000456331 CCDC192P0DO97 292 aa4.8□□□□□ -1.64
PPP1R9A-208ENST00000456331 FAM13BQ9NYF5 915 aa4.8□□□□□ -1.64
PPP1R9A-208ENST00000456331 CADPSQ9ULU8 1353 aa4.8□□□□□ -1.64
PPP1R9A-208ENST00000456331 DIAPH1O60610 1272 aaKnown RBP4.8□□□□□ -1.64
PPP1R9A-208ENST00000456331 KRT32Q14532 448 aa4.8□□□□□ -1.64
PPP1R9A-208ENST00000456331 MAP9Q49MG5 647 aa4.8□□□□□ -1.64
PPP1R9A-208ENST00000456331 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.79□□□□□ -1.64
PPP1R9A-208ENST00000456331 SMTNL1A8MU46 457 aa4.79□□□□□ -1.64
PPP1R9A-208ENST00000456331 NEMFO60524 1076 aa4.79□□□□□ -1.64
PPP1R9A-208ENST00000456331 CCAR2Q8N163 923 aaKnown RBP4.79□□□□□ -1.64
PPP1R9A-208ENST00000456331 IFT57Q9NWB7 429 aa4.79□□□□□ -1.64
PPP1R9A-208ENST00000456331 POTEB2H3BUK9 544 aa4.79□□□□□ -1.64
PPP1R9A-208ENST00000456331 CCDC146Q8IYE0 955 aa4.79□□□□□ -1.64
PPP1R9A-208ENST00000456331 WASF1Q92558 559 aa4.79□□□□□ -1.64
PPP1R9A-208ENST00000456331 L3MBTL2Q969R5 705 aa4.79□□□□□ -1.64
PPP1R9A-208ENST00000456331 RILPL2Q969X0 211 aa4.79□□□□□ -1.64
PPP1R9A-208ENST00000456331 WDR33Q9C0J8 1336 aaKnown RBP4.79□□□□□ -1.64
PPP1R9A-208ENST00000456331 KIF3BO15066 747 aa4.79□□□□□ -1.64
PPP1R9A-208ENST00000456331 MCM5P33992 734 aa4.79□□□□□ -1.64
PPP1R9A-208ENST00000456331 TBC1D2BQ9UPU7 963 aa4.79□□□□□ -1.64
PPP1R9A-208ENST00000456331 GOLGA6L9A6NEM1 432 aa4.79□□□□□ -1.64
PPP1R9A-208ENST00000456331 SLC4A10Q6U841 1118 aa4.79□□□□□ -1.64
PPP1R9A-208ENST00000456331 SPRYD3Q8NCJ5 442 aa4.79□□□□□ -1.64
PPP1R9A-208ENST00000456331 ZSCAN31Q96LW9 406 aaPredicted RBP4.79□□□□□ -1.64
PPP1R9A-208ENST00000456331 C22orf23Q9BZE7 217 aa4.79□□□□□ -1.64
PPP1R9A-208ENST00000456331 PAK3O75914 559 aaPredicted RBP4.78□□□□□ -1.64
PPP1R9A-208ENST00000456331 CETN2P41208 172 aa4.78□□□□□ -1.64
PPP1R9A-208ENST00000456331 HOOK3Q86VS8 718 aa4.78□□□□□ -1.64
PPP1R9A-208ENST00000456331 CCDC83Q8IWF9 413 aa4.78□□□□□ -1.64
PPP1R9A-208ENST00000456331 CCAR1Q8IX12 1150 aaKnown RBP4.78□□□□□ -1.64
PPP1R9A-208ENST00000456331 GAS2L2Q8NHY3 880 aa4.78□□□□□ -1.64
PPP1R9A-208ENST00000456331 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.78□□□□□ -1.64
PPP1R9A-208ENST00000456331 TOMM22Q9NS69 142 aa4.78□□□□□ -1.64
PPP1R9A-208ENST00000456331 VPS53Q5VIR6 699 aa4.78□□□□□ -1.64
PPP1R9A-208ENST00000456331 ANO2Q9NQ90 1003 aa4.78□□□□□ -1.64
PPP1R9A-208ENST00000456331 MICALCLQ6ZW33 695 aa4.78□□□□□ -1.64
PPP1R9A-208ENST00000456331 DHX37Q8IY37 1157 aaKnown RBP4.78□□□□□ -1.64
PPP1R9A-208ENST00000456331 GBP2P32456 591 aaPredicted RBP4.78□□□□□ -1.64
PPP1R9A-208ENST00000456331 HSP90AB2PQ58FF8 381 aa4.78□□□□□ -1.64
PPP1R9A-208ENST00000456331 CLUAP1Q96AJ1 413 aa4.78□□□□□ -1.64
PPP1R9A-208ENST00000456331 MCTP1Q6DN14 999 aa4.78□□□□□ -1.64
PPP1R9A-208ENST00000456331 TSPY26PQ9H489 355 aa4.78□□□□□ -1.64
PPP1R9A-208ENST00000456331 VPS37DQ86XT2 251 aa4.78□□□□□ -1.64
PPP1R9A-208ENST00000456331 SLC26A8Q96RN1 970 aa4.78□□□□□ -1.64
PPP1R9A-208ENST00000456331 CEP131Q9UPN4 1083 aa4.78□□□□□ -1.64
PPP1R9A-208ENST00000456331 CCDC30Q5VVM6 783 aa4.78□□□□□ -1.64
PPP1R9A-208ENST00000456331 GGT6Q6P531 493 aa4.78□□□□□ -1.64
PPP1R9A-208ENST00000456331 CLASRPQ8N2M8 674 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms