RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 WDR43Q15061 677 aaKnown RBP eCLIP11.81□□□□□ -0.52
RPE-216ENST00000454822 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.8□□□□□ -0.52
RPE-216ENST00000454822 MINK1Q8N4C8 1332 aaPredicted RBP11.8□□□□□ -0.52
RPE-216ENST00000454822 TNRQ92752 1358 aa11.79□□□□□ -0.52
RPE-216ENST00000454822 SRPK2P78362 688 aaKnown RBP11.79□□□□□ -0.52
RPE-216ENST00000454822 MORC1Q86VD1 984 aa11.79□□□□□ -0.52
RPE-216ENST00000454822 RNF123Q5XPI4 1314 aa11.79□□□□□ -0.52
RPE-216ENST00000454822 ANKRD36BQ8N2N9 1353 aa11.78□□□□□ -0.52
RPE-216ENST00000454822 HDGFP51858 240 aaKnown RBP11.78□□□□□ -0.52
RPE-216ENST00000454822 CGNL1Q0VF96 1302 aa11.77□□□□□ -0.52
RPE-216ENST00000454822 CDCA7LQ96GN5 454 aa11.77□□□□□ -0.53
RPE-216ENST00000454822 PPP4R2Q9NY27 417 aa11.77□□□□□ -0.53
RPE-216ENST00000454822 NINLQ9Y2I6 1382 aa11.76□□□□□ -0.53
RPE-216ENST00000454822 WAPLQ7Z5K2 1190 aa11.76□□□□□ -0.53
RPE-216ENST00000454822 CDK19Q9BWU1 502 aa11.76□□□□□ -0.53
RPE-216ENST00000454822 ABCC11Q96J66 1382 aa11.76□□□□□ -0.53
RPE-216ENST00000454822 POLR3AO14802 1390 aaPredicted RBP11.75□□□□□ -0.53
RPE-216ENST00000454822 ATAD2Q6PL18 1390 aa11.75□□□□□ -0.53
RPE-216ENST00000454822 USP32Q8NFA0 1604 aa11.75□□□□□ -0.53
RPE-216ENST00000454822 DLC1Q96QB1 1528 aa11.75□□□□□ -0.53
RPE-216ENST00000454822 TNNT2P45379 298 aaPredicted RBP11.75□□□□□ -0.53
RPE-216ENST00000454822 CEBPAP49715 358 aaPredicted RBP11.75□□□□□ -0.53
RPE-216ENST00000454822 SETD1AO15047 1707 aaKnown RBP11.75□□□□□ -0.53
RPE-216ENST00000454822 MYT1Q01538 1121 aa11.74□□□□□ -0.53
RPE-216ENST00000454822 METP08581 1390 aa11.74□□□□□ -0.53
RPE-216ENST00000454822 TMEM2Q9UHN6 1383 aa11.74□□□□□ -0.53
RPE-216ENST00000454822 NRXN3Q9Y4C0 1643 aa11.74□□□□□ -0.53
RPE-216ENST00000454822 A0A1W2PP64 1363 aa11.73□□□□□ -0.53
RPE-216ENST00000454822 PLEKHH1Q9ULM0 1364 aa11.73□□□□□ -0.53
RPE-216ENST00000454822 TERF2IPQ9NYB0 399 aa11.73□□□□□ -0.53
RPE-216ENST00000454822 RCAN3Q9UKA8 241 aa11.73□□□□□ -0.53
RPE-216ENST00000454822 NSD2O96028 1365 aa11.73□□□□□ -0.53
RPE-216ENST00000454822 CCDC146Q8IYE0 955 aa11.72□□□□□ -0.53
RPE-216ENST00000454822 UBR1Q8IWV7 1749 aa11.72□□□□□ -0.53
RPE-216ENST00000454822 TSHZ2Q9NRE2 1034 aa11.72□□□□□ -0.53
RPE-216ENST00000454822 MTHFSP49914 203 aa11.71□□□□□ -0.53
RPE-216ENST00000454822 TXNDC2Q86VQ3 553 aa11.71□□□□□ -0.53
RPE-216ENST00000454822 SIRT1Q96EB6 747 aa11.71□□□□□ -0.53
RPE-216ENST00000454822 CABP1Q9NZU7 370 aa11.71□□□□□ -0.53
RPE-216ENST00000454822 ZNF521Q96K83 1311 aa11.71□□□□□ -0.54
RPE-216ENST00000454822 CD163L1Q9NR16 1453 aa11.71□□□□□ -0.54
RPE-216ENST00000454822 NLRP1Q9C000 1473 aa11.7□□□□□ -0.54
RPE-216ENST00000454822 APAF1O14727 1248 aa11.7□□□□□ -0.54
RPE-216ENST00000454822 HDGFL2Q7Z4V5 671 aaPredicted RBP11.7□□□□□ -0.54
RPE-216ENST00000454822 LTKP29376 864 aa11.69□□□□□ -0.54
RPE-216ENST00000454822 FYB1O15117 783 aa11.69□□□□□ -0.54
RPE-216ENST00000454822 RRP1P56182 461 aaKnown RBP11.69□□□□□ -0.54
RPE-216ENST00000454822 B4GALNT3Q6L9W6 998 aa11.69□□□□□ -0.54
RPE-216ENST00000454822 PLPPR3Q6T4P5 718 aa11.69□□□□□ -0.54
RPE-216ENST00000454822 GGNBP2Q9H3C7 697 aa11.69□□□□□ -0.54
RPE-216ENST00000454822 WASLO00401 505 aaPredicted RBP11.68□□□□□ -0.54
RPE-216ENST00000454822 GOLGA2Q08379 1002 aa11.68□□□□□ -0.54
RPE-216ENST00000454822 CFAP53Q96M91 514 aa11.68□□□□□ -0.54
RPE-216ENST00000454822 FAM135BQ49AJ0 1406 aa11.68□□□□□ -0.54
RPE-216ENST00000454822 C3P01024 1663 aa11.67□□□□□ -0.54
RPE-216ENST00000454822 TECPR2O15040 1411 aa11.67□□□□□ -0.54
RPE-216ENST00000454822 ADAMTS13Q76LX8 1427 aa11.67□□□□□ -0.54
RPE-216ENST00000454822 PLEKHG1Q9ULL1 1385 aa11.67□□□□□ -0.54
RPE-216ENST00000454822 SLFN5Q08AF3 891 aa11.66□□□□□ -0.54
RPE-216ENST00000454822 DUSP27Q5VZP5 1158 aa11.66□□□□□ -0.54
RPE-216ENST00000454822 NGEFQ8N5V2 710 aa11.66□□□□□ -0.54
RPE-216ENST00000454822 EID1Q9Y6B2 187 aa11.66□□□□□ -0.54
RPE-216ENST00000454822 SHPRHQ149N8 1683 aa11.66□□□□□ -0.54
RPE-216ENST00000454822 KNDC1Q76NI1 1749 aa11.65□□□□□ -0.54
RPE-216ENST00000454822 FER1L4A9Z1Z3 1794 aa11.65□□□□□ -0.54
RPE-216ENST00000454822 TRMT2AQ8IZ69 625 aaKnown RBP11.65□□□□□ -0.54
RPE-216ENST00000454822 MED14O60244 1454 aa11.65□□□□□ -0.54
RPE-216ENST00000454822 RUNDC1Q96C34 613 aa11.65□□□□□ -0.55
RPE-216ENST00000454822 THEMISQ8N1K5 641 aaPredicted RBP11.64□□□□□ -0.55
RPE-216ENST00000454822 NUDT16Q96DE0 195 aaKnown RBP11.64□□□□□ -0.55
RPE-216ENST00000454822 ROBO2Q9HCK4 1378 aa11.64□□□□□ -0.55
RPE-216ENST00000454822 ATP7BP35670 1465 aa11.64□□□□□ -0.55
RPE-216ENST00000454822 CPS1P31327 1500 aa11.64□□□□□ -0.55
RPE-216ENST00000454822 SLC26A8Q96RN1 970 aa11.63□□□□□ -0.55
RPE-216ENST00000454822 SLIT1O75093 1534 aa11.63□□□□□ -0.55
RPE-216ENST00000454822 PPIP5K1Q6PFW1 1433 aa11.63□□□□□ -0.55
RPE-216ENST00000454822 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.63□□□□□ -0.557e-7■□□□□ 9.5
RPE-216ENST00000454822 SPINK5Q9NQ38 1064 aaPredicted RBP11.63□□□□□ -0.55
RPE-216ENST00000454822 ARHGAP23Q9P227 1491 aa11.63□□□□□ -0.55
RPE-216ENST00000454822 CCDC61Q9Y6R9 512 aa11.63□□□□□ -0.55
RPE-216ENST00000454822 ANKRD26Q9UPS8 1709 aa11.62□□□□□ -0.55
RPE-216ENST00000454822 U2AF1L5P0DN76 240 aaPredicted RBP11.62□□□□□ -0.55
RPE-216ENST00000454822 U2AF1Q01081 240 aaKnown RBP eCLIP11.62□□□□□ -0.55
RPE-216ENST00000454822 TCP11L2Q8N4U5 519 aa11.62□□□□□ -0.55
RPE-216ENST00000454822 EXOC6Q8TAG9 804 aa11.62□□□□□ -0.55
RPE-216ENST00000454822 CCDC136Q96JN2 1154 aa11.62□□□□□ -0.55
RPE-216ENST00000454822 CPSF1Q10570 1443 aaKnown RBP11.62□□□□□ -0.55
RPE-216ENST00000454822 NCKAP5LQ9HCH0 1330 aa11.62□□□□□ -0.55
RPE-216ENST00000454822 E9PSI1 815 aa11.62□□□□□ -0.55
RPE-216ENST00000454822 PLIN1O60240 522 aa11.62□□□□□ -0.55
RPE-216ENST00000454822 WWC1Q8IX03 1113 aa11.62□□□□□ -0.55
RPE-216ENST00000454822 TBX22Q9Y458 520 aa11.62□□□□□ -0.55
RPE-216ENST00000454822 DMRT2Q9Y5R5 561 aa11.62□□□□□ -0.55
RPE-216ENST00000454822 PTPRUQ92729 1446 aa11.61□□□□□ -0.55
RPE-216ENST00000454822 RRP7AQ9Y3A4 280 aaKnown RBP11.6□□□□□ -0.55
RPE-216ENST00000454822 KIF20BQ96Q89 1820 aa11.6□□□□□ -0.55
RPE-216ENST00000454822 NEUROD2Q15784 382 aa11.6□□□□□ -0.55
RPE-216ENST00000454822 AMOTL2Q9Y2J4 779 aa11.6□□□□□ -0.55
RPE-216ENST00000454822 PRR36Q9H6K5 1346 aa11.59□□□□□ -0.55
RPE-216ENST00000454822 PHF23Q9BUL5 403 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms