RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 ASXL1Q8IXJ9 1541 aa11.59□□□□□ -0.55
RBM39-218ENST00000449489 TMEM131LA2VDJ0 1609 aa11.58□□□□□ -0.56
RBM39-218ENST00000449489 PNPLA6Q8IY17 1366 aa11.57□□□□□ -0.56
RBM39-218ENST00000449489 SETBP1Q9Y6X0 1596 aa11.57□□□□□ -0.56
RBM39-218ENST00000449489 ANKRD30AQ9BXX3 1397 aa11.56□□□□□ -0.56
RBM39-218ENST00000449489 MST1RQ04912 1400 aa11.56□□□□□ -0.56
RBM39-218ENST00000449489 FNBP4Q8N3X1 1017 aaPredicted RBP11.56□□□□□ -0.56
RBM39-218ENST00000449489 TRPC5Q9UL62 973 aaPredicted RBP11.56□□□□□ -0.56
RBM39-218ENST00000449489 AMOTL2Q9Y2J4 779 aa11.56□□□□□ -0.56
RBM39-218ENST00000449489 DAPK1P53355 1430 aa11.55□□□□□ -0.56
RBM39-218ENST00000449489 GCC2Q8IWJ2 1684 aa11.55□□□□□ -0.56
RBM39-218ENST00000449489 TRPM2O94759 1503 aa11.55□□□□□ -0.56
RBM39-218ENST00000449489 PTCH1Q13635 1447 aa11.53□□□□□ -0.56
RBM39-218ENST00000449489 USP21Q9UK80 565 aa11.53□□□□□ -0.56
RBM39-218ENST00000449489 LAMC1P11047 1609 aa11.53□□□□□ -0.56
RBM39-218ENST00000449489 ATRNO75882 1429 aa11.52□□□□□ -0.56
RBM39-218ENST00000449489 PTPRUQ92729 1446 aa11.52□□□□□ -0.56
RBM39-218ENST00000449489 KANK4Q5T7N3 995 aaPredicted RBP11.52□□□□□ -0.57
RBM39-218ENST00000449489 VPS8Q8N3P4 1428 aa11.52□□□□□ -0.57
RBM39-218ENST00000449489 PTPN23Q9H3S7 1636 aa11.51□□□□□ -0.57
RBM39-218ENST00000449489 XRN1Q8IZH2 1706 aaKnown RBP11.51□□□□□ -0.57
RBM39-218ENST00000449489 ADGRL2O95490 1459 aa11.5□□□□□ -0.57
RBM39-218ENST00000449489 UNC13BO14795 1591 aa11.5□□□□□ -0.57
RBM39-218ENST00000449489 LRP5O75197 1615 aa11.49□□□□□ -0.57
RBM39-218ENST00000449489 ADAMTS2O95450 1211 aa11.49□□□□□ -0.57
RBM39-218ENST00000449489 SOS2Q07890 1332 aaPredicted RBP11.49□□□□□ -0.57
RBM39-218ENST00000449489 ADGRL3Q9HAR2 1447 aa11.49□□□□□ -0.57
RBM39-218ENST00000449489 BLMP54132 1417 aaPredicted RBP11.47□□□□□ -0.57
RBM39-218ENST00000449489 PIP4P2Q8N4L2 257 aa11.47□□□□□ -0.57
RBM39-218ENST00000449489 COL22A1Q8NFW1 1626 aaPredicted RBP11.46□□□□□ -0.57
RBM39-218ENST00000449489 C1orf167Q5SNV9 1468 aa11.46□□□□□ -0.57
RBM39-218ENST00000449489 ANKRD50Q9ULJ7 1429 aa11.46□□□□□ -0.57
RBM39-218ENST00000449489 PITPNM1O00562 1244 aa11.46□□□□□ -0.57
RBM39-218ENST00000449489 CHGAP10645 457 aaKnown RBP11.46□□□□□ -0.57
RBM39-218ENST00000449489 DDX17Q92841 729 aaKnown RBP11.46□□□□□ -0.57
RBM39-218ENST00000449489 CHIC2Q9UKJ5 165 aa11.46□□□□□ -0.57
RBM39-218ENST00000449489 NRXN3Q9Y4C0 1643 aa11.46□□□□□ -0.58
RBM39-218ENST00000449489 BCL9LQ86UU0 1499 aa11.45□□□□□ -0.58
RBM39-218ENST00000449489 IFNLR1Q8IU57 520 aaPredicted RBP11.45□□□□□ -0.58
RBM39-218ENST00000449489 GJD4Q96KN9 370 aaPredicted RBP11.45□□□□□ -0.58
RBM39-218ENST00000449489 PLEKHG5O94827 1062 aa11.44□□□□□ -0.58
RBM39-218ENST00000449489 MYOM2P54296 1465 aa11.43□□□□□ -0.58
RBM39-218ENST00000449489 METP08581 1390 aa11.42□□□□□ -0.58
RBM39-218ENST00000449489 IQGAP3Q86VI3 1631 aa11.42□□□□□ -0.58
RBM39-218ENST00000449489 SPHKAPQ2M3C7 1700 aa11.42□□□□□ -0.58
RBM39-218ENST00000449489 NALCNQ8IZF0 1738 aa11.42□□□□□ -0.58
RBM39-218ENST00000449489 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.42□□□□□ -0.58
RBM39-218ENST00000449489 E9PCH4 1651 aa11.42□□□□□ -0.58
RBM39-218ENST00000449489 MARF1Q9Y4F3 1742 aaKnown RBP11.41□□□□□ -0.58
RBM39-218ENST00000449489 PLCD3Q8N3E9 789 aa11.41□□□□□ -0.58
RBM39-218ENST00000449489 KLHL34Q8N239 644 aa11.4□□□□□ -0.58
RBM39-218ENST00000449489 PRAG1Q86YV5 1406 aa11.4□□□□□ -0.58
RBM39-218ENST00000449489 UTRNP46939 3433 aa11.39□□□□□ -0.59
RBM39-218ENST00000449489 SF3B2Q13435 895 aaKnown RBP11.39□□□□□ -0.59
RBM39-218ENST00000449489 DEFB132Q7Z7B7 95 aa11.39□□□□□ -0.59
RBM39-218ENST00000449489 SP7Q8TDD2 431 aaPredicted RBP11.39□□□□□ -0.59
RBM39-218ENST00000449489 ORAI2Q96SN7 254 aa11.39□□□□□ -0.59
RBM39-218ENST00000449489 NPHP3Q7Z494 1330 aa11.38□□□□□ -0.59
RBM39-218ENST00000449489 ONECUT3O60422 494 aaPredicted RBP11.38□□□□□ -0.59
RBM39-218ENST00000449489 FXR2P51116 673 aaKnown RBP eCLIP11.38□□□□□ -0.597e-33■■□□□ 11.8
RBM39-218ENST00000449489 UNC5CLQ8IV45 518 aa11.38□□□□□ -0.59
RBM39-218ENST00000449489 ZBTB47Q9UFB7 747 aaPredicted RBP11.38□□□□□ -0.59
RBM39-218ENST00000449489 SLIT2O94813 1529 aa11.37□□□□□ -0.59
RBM39-218ENST00000449489 SLC24A1O60721 1099 aa11.37□□□□□ -0.59
RBM39-218ENST00000449489 HRCP23327 699 aa11.37□□□□□ -0.59
RBM39-218ENST00000449489 RALGAPBQ86X10 1494 aa11.37□□□□□ -0.59
RBM39-218ENST00000449489 GLI3P10071 1580 aa11.37□□□□□ -0.59
RBM39-218ENST00000449489 HAX1O00165 279 aa11.36□□□□□ -0.59
RBM39-218ENST00000449489 MIER1Q8N108 512 aa11.36□□□□□ -0.59
RBM39-218ENST00000449489 SPOCK2Q92563 424 aa11.36□□□□□ -0.59
RBM39-218ENST00000449489 BRWD3Q6RI45 1802 aa11.36□□□□□ -0.59
RBM39-218ENST00000449489 PXDNQ92626 1479 aa11.35□□□□□ -0.59
RBM39-218ENST00000449489 LRPPRCP42704 1394 aaKnown RBP11.34□□□□□ -0.59
RBM39-218ENST00000449489 HFM1A2PYH4 1435 aa11.34□□□□□ -0.59
RBM39-218ENST00000449489 ROCK1Q13464 1354 aa11.33□□□□□ -0.6
RBM39-218ENST00000449489 SEPT12Q8IYM1 358 aa11.33□□□□□ -0.6
RBM39-218ENST00000449489 ROBO2Q9HCK4 1378 aa11.32□□□□□ -0.6
RBM39-218ENST00000449489 NEXMIFQ5QGS0 1516 aa11.32□□□□□ -0.6
RBM39-218ENST00000449489 BAG6P46379 1132 aa11.32□□□□□ -0.6
RBM39-218ENST00000449489 VPS72Q15906 364 aa11.32□□□□□ -0.6
RBM39-218ENST00000449489 ZNF326Q5BKZ1 582 aaKnown RBP11.32□□□□□ -0.6
RBM39-218ENST00000449489 SPDYE1Q8NFV5 336 aaPredicted RBP11.32□□□□□ -0.6
RBM39-218ENST00000449489 NUP155O75694 1391 aa11.31□□□□□ -0.6
RBM39-218ENST00000449489 KRT27Q7Z3Y8 459 aa11.31□□□□□ -0.6
RBM39-218ENST00000449489 CDC42BPGQ6DT37 1551 aa11.3□□□□□ -0.6
RBM39-218ENST00000449489 PSDA5PKW4 1024 aaPredicted RBP11.3□□□□□ -0.6
RBM39-218ENST00000449489 ESCO1Q5FWF5 840 aa11.3□□□□□ -0.6
RBM39-218ENST00000449489 NWD2Q9ULI1 1742 aa11.29□□□□□ -0.6
RBM39-218ENST00000449489 VGFO15240 615 aaPredicted RBP11.29□□□□□ -0.6
RBM39-218ENST00000449489 FOXO3O43524 673 aa11.29□□□□□ -0.6
RBM39-218ENST00000449489 CLEC11AQ9Y240 323 aa11.29□□□□□ -0.6
RBM39-218ENST00000449489 SPATA31A3Q5VYP0 1347 aa11.29□□□□□ -0.6
RBM39-218ENST00000449489 DISP2A7MBM2 1401 aa11.28□□□□□ -0.6
RBM39-218ENST00000449489 FAM50AQ14320 339 aaKnown RBP11.28□□□□□ -0.6
RBM39-218ENST00000449489 USP32Q8NFA0 1604 aa11.27□□□□□ -0.6
RBM39-218ENST00000449489 YY1P25490 414 aa11.27□□□□□ -0.61
RBM39-218ENST00000449489 RPGRIP1LQ68CZ1 1315 aa11.26□□□□□ -0.61
RBM39-218ENST00000449489 CCDC144AA2RUR9 1427 aa11.26□□□□□ -0.61
RBM39-218ENST00000449489 KIF1BO60333 1816 aa11.25□□□□□ -0.61
RBM39-218ENST00000449489 CEP350Q5VT06 3117 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms