RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 EXOC6Q8TAG9 804 aa17.44■□□□□ 0.38
SYNGAP1-204ENST00000449372 AGLP35573 1532 aa17.43■□□□□ 0.38
SYNGAP1-204ENST00000449372 ERVK-7P63135 1459 aa17.43■□□□□ 0.38
SYNGAP1-204ENST00000449372 MYO5BQ9ULV0 1848 aa17.43■□□□□ 0.38
SYNGAP1-204ENST00000449372 CFAP70Q5T0N1 1121 aa17.42■□□□□ 0.38
SYNGAP1-204ENST00000449372 L1TD1Q5T7N2 865 aaKnown RBP17.42■□□□□ 0.38
SYNGAP1-204ENST00000449372 TMEM131LA2VDJ0 1609 aa17.42■□□□□ 0.38
SYNGAP1-204ENST00000449372 CLCN1P35523 988 aa17.41■□□□□ 0.38
SYNGAP1-204ENST00000449372 SBNO2Q9Y2G9 1366 aa17.41■□□□□ 0.38
SYNGAP1-204ENST00000449372 PANK3Q9H999 370 aa17.41■□□□□ 0.38
SYNGAP1-204ENST00000449372 FAM69CQ0P6D2 419 aa17.4■□□□□ 0.38
SYNGAP1-204ENST00000449372 NLRP13Q86W25 1043 aa17.4■□□□□ 0.38
SYNGAP1-204ENST00000449372 EIF3AQ14152 1382 aaKnown RBP17.4■□□□□ 0.38
SYNGAP1-204ENST00000449372 RPGRIP1LQ68CZ1 1315 aa17.4■□□□□ 0.38
SYNGAP1-204ENST00000449372 SENP3-EIF4A1A0A087X0R7 540 aa17.39■□□□□ 0.37
SYNGAP1-204ENST00000449372 CNGB1Q14028 1251 aaPredicted RBP17.39■□□□□ 0.37
SYNGAP1-204ENST00000449372 POGKQ9P215 609 aa17.39■□□□□ 0.37
SYNGAP1-204ENST00000449372 RCAN3Q9UKA8 241 aa17.39■□□□□ 0.37
SYNGAP1-204ENST00000449372 QRICH2Q9H0J4 1663 aa17.38■□□□□ 0.37
SYNGAP1-204ENST00000449372 C14orf93Q9H972 538 aaKnown RBP17.37■□□□□ 0.37
SYNGAP1-204ENST00000449372 ZFYVE9O95405 1425 aa17.37■□□□□ 0.37
SYNGAP1-204ENST00000449372 ARHGEF28Q8N1W1 1705 aaKnown RBP17.37■□□□□ 0.37
SYNGAP1-204ENST00000449372 RRP1P56182 461 aaKnown RBP17.37■□□□□ 0.37
SYNGAP1-204ENST00000449372 INSRP06213 1382 aa17.37■□□□□ 0.37
SYNGAP1-204ENST00000449372 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.36■□□□□ 0.37
SYNGAP1-204ENST00000449372 PDIA4P13667 645 aaKnown RBP17.35■□□□□ 0.37
SYNGAP1-204ENST00000449372 NPC1L1Q9UHC9 1359 aa17.34■□□□□ 0.37
SYNGAP1-204ENST00000449372 AMER1Q5JTC6 1135 aaPredicted RBP17.34■□□□□ 0.37
SYNGAP1-204ENST00000449372 ASXL1Q8IXJ9 1541 aa17.34■□□□□ 0.37
SYNGAP1-204ENST00000449372 ARHGEF40Q8TER5 1519 aa17.34■□□□□ 0.37
SYNGAP1-204ENST00000449372 SKAP1Q86WV1 359 aa17.33■□□□□ 0.37
SYNGAP1-204ENST00000449372 CALD1Q05682 793 aaKnown RBP17.33■□□□□ 0.36
SYNGAP1-204ENST00000449372 PDCL3Q9H2J4 239 aa17.33■□□□□ 0.36
SYNGAP1-204ENST00000449372 CLTCQ00610 1675 aaKnown RBP17.33■□□□□ 0.36
SYNGAP1-204ENST00000449372 ARXQ96QS3 562 aa17.32■□□□□ 0.36
SYNGAP1-204ENST00000449372 CDCA8Q53HL2 280 aa17.32■□□□□ 0.36
SYNGAP1-204ENST00000449372 PRDM4Q9UKN5 801 aa17.32■□□□□ 0.36
SYNGAP1-204ENST00000449372 BLMP54132 1417 aaPredicted RBP17.31■□□□□ 0.36
SYNGAP1-204ENST00000449372 SPATA31D1Q6ZQQ2 1576 aa17.31■□□□□ 0.36
SYNGAP1-204ENST00000449372 IDI1Q13907 227 aa17.31■□□□□ 0.36
SYNGAP1-204ENST00000449372 RGS3P49796 1198 aa17.3■□□□□ 0.36
SYNGAP1-204ENST00000449372 SLC52A1Q9NWF4 448 aa17.29■□□□□ 0.36
SYNGAP1-204ENST00000449372 CENPJQ9HC77 1338 aaPredicted RBP17.29■□□□□ 0.36
SYNGAP1-204ENST00000449372 CC2D1BQ5T0F9 858 aaKnown RBP17.28■□□□□ 0.36
SYNGAP1-204ENST00000449372 PPP6R1Q9UPN7 881 aa17.27■□□□□ 0.36
SYNGAP1-204ENST00000449372 USP32Q8NFA0 1604 aa17.27■□□□□ 0.36
SYNGAP1-204ENST00000449372 SETD1AO15047 1707 aaKnown RBP17.26■□□□□ 0.35
SYNGAP1-204ENST00000449372 XRCC6P12956 609 aaKnown RBP eCLIP17.26■□□□□ 0.35
SYNGAP1-204ENST00000449372 TULP4Q9NRJ4 1543 aa17.26■□□□□ 0.35
SYNGAP1-204ENST00000449372 BCL11BQ9C0K0 894 aaPredicted RBP17.25■□□□□ 0.35
SYNGAP1-204ENST00000449372 CHGAP10645 457 aaKnown RBP17.25■□□□□ 0.35
SYNGAP1-204ENST00000449372 GOLGA6L3A6NEY3 463 aa17.24■□□□□ 0.35
SYNGAP1-204ENST00000449372 CARD14Q9BXL6 1004 aa17.24■□□□□ 0.35
SYNGAP1-204ENST00000449372 VGFO15240 615 aaPredicted RBP17.23■□□□□ 0.35
SYNGAP1-204ENST00000449372 TPM2P07951 284 aa17.23■□□□□ 0.35
SYNGAP1-204ENST00000449372 PPP2R1AP30153 589 aa17.22■□□□□ 0.35
SYNGAP1-204ENST00000449372 PTPRMP28827 1452 aa17.22■□□□□ 0.35
SYNGAP1-204ENST00000449372 FBXO31Q5XUX0 539 aaPredicted RBP17.22■□□□□ 0.35
SYNGAP1-204ENST00000449372 TMEM132EQ6IEE7 984 aa17.22■□□□□ 0.35
SYNGAP1-204ENST00000449372 WDR43Q15061 677 aaKnown RBP eCLIP17.21■□□□□ 0.359e-6■■■□□ 15.6
SYNGAP1-204ENST00000449372 PANK2Q9BZ23 570 aa17.21■□□□□ 0.35
SYNGAP1-204ENST00000449372 KNSTRNQ9Y448 316 aa17.21■□□□□ 0.35
SYNGAP1-204ENST00000449372 FAM161AQ3B820 660 aa17.21■□□□□ 0.35
SYNGAP1-204ENST00000449372 ALKQ9UM73 1620 aa17.2■□□□□ 0.34
SYNGAP1-204ENST00000449372 A2ML1A8K2U0 1454 aa17.2■□□□□ 0.34
SYNGAP1-204ENST00000449372 PUS7Q96PZ0 661 aaKnown RBP17.2■□□□□ 0.34
SYNGAP1-204ENST00000449372 TRAK1Q9UPV9 953 aa17.2■□□□□ 0.34
SYNGAP1-204ENST00000449372 NRXN3Q9Y4C0 1643 aa17.18■□□□□ 0.34
SYNGAP1-204ENST00000449372 ESPNB1AK53 854 aa17.17■□□□□ 0.34
SYNGAP1-204ENST00000449372 C8orf34Q49A92 452 aa17.17■□□□□ 0.34
SYNGAP1-204ENST00000449372 CENPQQ7L2Z9 268 aaPredicted RBP17.16■□□□□ 0.34
SYNGAP1-204ENST00000449372 NUTM2DQ5VT03 806 aaPredicted RBP17.16■□□□□ 0.34
SYNGAP1-204ENST00000449372 NGEFQ8N5V2 710 aa17.16■□□□□ 0.34
SYNGAP1-204ENST00000449372 SHPRHQ149N8 1683 aa17.16■□□□□ 0.34
SYNGAP1-204ENST00000449372 FSD2A1L4K1 749 aa17.15■□□□□ 0.34
SYNGAP1-204ENST00000449372 SLKQ9H2G2 1235 aaPredicted RBP17.14■□□□□ 0.33
SYNGAP1-204ENST00000449372 PLIN1O60240 522 aa17.13■□□□□ 0.33
SYNGAP1-204ENST00000449372 YTHDC2Q9H6S0 1430 aaKnown RBP17.13■□□□□ 0.33
SYNGAP1-204ENST00000449372 CRBNQ96SW2 442 aa17.12■□□□□ 0.33
SYNGAP1-204ENST00000449372 GZF1Q9H116 711 aaPredicted RBP17.12■□□□□ 0.33
SYNGAP1-204ENST00000449372 ADAMTS8Q9UP79 889 aa17.12■□□□□ 0.33
SYNGAP1-204ENST00000449372 DLC1Q96QB1 1528 aa17.12■□□□□ 0.33
SYNGAP1-204ENST00000449372 MYH16Q9H6N6 1097 aa17.12■□□□□ 0.33
SYNGAP1-204ENST00000449372 NSD3Q9BZ95 1437 aa17.11■□□□□ 0.33
SYNGAP1-204ENST00000449372 ERBB4Q15303 1308 aa17.1■□□□□ 0.33
SYNGAP1-204ENST00000449372 ZNF521Q96K83 1311 aa17.1■□□□□ 0.33
SYNGAP1-204ENST00000449372 SLC12A5Q9H2X9 1139 aa17.1■□□□□ 0.33
SYNGAP1-204ENST00000449372 UBR1Q8IWV7 1749 aa17.09■□□□□ 0.33
SYNGAP1-204ENST00000449372 CD163L1Q9NR16 1453 aa17.09■□□□□ 0.33
SYNGAP1-204ENST00000449372 MRE11P49959 708 aa17.09■□□□□ 0.33
SYNGAP1-204ENST00000449372 KIAA1211Q6ZU35 1233 aa17.09■□□□□ 0.33
SYNGAP1-204ENST00000449372 TRIM44Q96DX7 344 aaPredicted RBP17.09■□□□□ 0.33
SYNGAP1-204ENST00000449372 ANKRD26Q9UPS8 1709 aa17.09■□□□□ 0.33
SYNGAP1-204ENST00000449372 ZMYM3Q14202 1370 aa17.09■□□□□ 0.33
SYNGAP1-204ENST00000449372 ANKRD36BQ8N2N9 1353 aa17.09■□□□□ 0.33
SYNGAP1-204ENST00000449372 BECN1Q14457 450 aa17.08■□□□□ 0.32
SYNGAP1-204ENST00000449372 POLR3AO14802 1390 aaPredicted RBP17.08■□□□□ 0.32
SYNGAP1-204ENST00000449372 KNDC1Q76NI1 1749 aa17.08■□□□□ 0.32
SYNGAP1-204ENST00000449372 RIMS2Q9UQ26 1411 aa17.08■□□□□ 0.32
SYNGAP1-204ENST00000449372 EVC2Q86UK5 1308 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms