RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 INSRP06213 1382 aa23.84■■□□□ 1.41
LMNA-208ENST00000448611 ABCC11Q96J66 1382 aa23.83■■□□□ 1.41
LMNA-208ENST00000448611 NSD3Q9BZ95 1437 aa23.83■■□□□ 1.41
LMNA-208ENST00000448611 CABP2Q9NPB3 220 aa23.82■■□□□ 1.4
LMNA-208ENST00000448611 USP32Q8NFA0 1604 aa23.81■■□□□ 1.4
LMNA-208ENST00000448611 METP08581 1390 aa23.81■■□□□ 1.4
LMNA-208ENST00000448611 SETD1BQ9UPS6 1966 aaKnown RBP23.81■■□□□ 1.4
LMNA-208ENST00000448611 MINK1Q8N4C8 1332 aaPredicted RBP23.8■■□□□ 1.4
LMNA-208ENST00000448611 ANKRD36BQ8N2N9 1353 aa23.8■■□□□ 1.4
LMNA-208ENST00000448611 NINLQ9Y2I6 1382 aa23.8■■□□□ 1.4
LMNA-208ENST00000448611 BLMP54132 1417 aaPredicted RBP23.78■■□□□ 1.4
LMNA-208ENST00000448611 ATAD2Q6PL18 1390 aa23.77■■□□□ 1.4
LMNA-208ENST00000448611 SRPK2P78362 688 aaKnown RBP23.77■■□□□ 1.4
LMNA-208ENST00000448611 FKBP8Q14318 412 aa23.76■■□□□ 1.39
LMNA-208ENST00000448611 PLEKHH1Q9ULM0 1364 aa23.76■■□□□ 1.39
LMNA-208ENST00000448611 TECPR2O15040 1411 aa23.75■■□□□ 1.39
LMNA-208ENST00000448611 SMG6Q86US8 1419 aaKnown RBP23.75■■□□□ 1.39
LMNA-208ENST00000448611 KNDC1Q76NI1 1749 aa23.75■■□□□ 1.39
LMNA-208ENST00000448611 CEP170BQ9Y4F5 1589 aaPredicted RBP23.75■■□□□ 1.39
LMNA-208ENST00000448611 ADAMTS13Q76LX8 1427 aa23.75■■□□□ 1.39
LMNA-208ENST00000448611 WAPLQ7Z5K2 1190 aa23.74■■□□□ 1.39
LMNA-208ENST00000448611 PLEKHG1Q9ULL1 1385 aa23.74■■□□□ 1.39
LMNA-208ENST00000448611 NEFLP07196 543 aa23.74■■□□□ 1.39
LMNA-208ENST00000448611 ARHGAP23Q9P227 1491 aa23.74■■□□□ 1.39
LMNA-208ENST00000448611 SLIT1O75093 1534 aa23.73■■□□□ 1.39
LMNA-208ENST00000448611 LTKP29376 864 aa23.73■■□□□ 1.39
LMNA-208ENST00000448611 SENP3-EIF4A1A0A087X0R7 540 aa23.72■■□□□ 1.39
LMNA-208ENST00000448611 CDK19Q9BWU1 502 aa23.72■■□□□ 1.39
LMNA-208ENST00000448611 SIRT1Q96EB6 747 aa23.72■■□□□ 1.39
LMNA-208ENST00000448611 CGNL1Q0VF96 1302 aa23.72■■□□□ 1.39
LMNA-208ENST00000448611 A0A1W2PP64 1363 aa23.71■■□□□ 1.39
LMNA-208ENST00000448611 FAM135BQ49AJ0 1406 aa23.71■■□□□ 1.39
LMNA-208ENST00000448611 CPS1P31327 1500 aa23.71■■□□□ 1.39
LMNA-208ENST00000448611 CD163L1Q9NR16 1453 aa23.7■■□□□ 1.38
LMNA-208ENST00000448611 THEMISQ8N1K5 641 aaPredicted RBP23.7■■□□□ 1.38
LMNA-208ENST00000448611 BCANQ96GW7 911 aa23.7■■□□□ 1.38
LMNA-208ENST00000448611 ADAMTS8Q9UP79 889 aa23.7■■□□□ 1.38
LMNA-208ENST00000448611 ZNF142P52746 1687 aaPredicted RBP23.7■■□□□ 1.38
LMNA-208ENST00000448611 TXNDC2Q86VQ3 553 aa23.69■■□□□ 1.38
LMNA-208ENST00000448611 NSD2O96028 1365 aa23.69■■□□□ 1.38
LMNA-208ENST00000448611 MED14O60244 1454 aa23.69■■□□□ 1.38
LMNA-208ENST00000448611 NUDCQ9Y266 331 aa23.69■■□□□ 1.38
LMNA-208ENST00000448611 MORC1Q86VD1 984 aa23.68■■□□□ 1.38
LMNA-208ENST00000448611 WDR43Q15061 677 aaKnown RBP eCLIP23.67■■□□□ 1.38
LMNA-208ENST00000448611 EID1Q9Y6B2 187 aa23.67■■□□□ 1.38
LMNA-208ENST00000448611 TERF2IPQ9NYB0 399 aa23.65■■□□□ 1.38
LMNA-208ENST00000448611 POLR3AO14802 1390 aaPredicted RBP23.65■■□□□ 1.38
LMNA-208ENST00000448611 ROBO2Q9HCK4 1378 aa23.62■■□□□ 1.37
LMNA-208ENST00000448611 WASLO00401 505 aaPredicted RBP23.62■■□□□ 1.37
LMNA-208ENST00000448611 CABP1Q9NZU7 370 aa23.62■■□□□ 1.37
LMNA-208ENST00000448611 LMTK3Q96Q04 1460 aa23.61■■□□□ 1.37
LMNA-208ENST00000448611 PDE3BQ13370 1112 aa23.61■■□□□ 1.37
LMNA-208ENST00000448611 HSPA2P54652 639 aa23.6■■□□□ 1.37
LMNA-208ENST00000448611 ATP7BP35670 1465 aa23.59■■□□□ 1.37
LMNA-208ENST00000448611 HDGFL2Q7Z4V5 671 aaPredicted RBP23.59■■□□□ 1.37
LMNA-208ENST00000448611 SALL2Q9Y467 1007 aaPredicted RBP23.59■■□□□ 1.37
LMNA-208ENST00000448611 PTPRUQ92729 1446 aa23.58■■□□□ 1.37
LMNA-208ENST00000448611 TNNT2P45379 298 aaPredicted RBP23.58■■□□□ 1.37
LMNA-208ENST00000448611 SLC26A8Q96RN1 970 aa23.58■■□□□ 1.37
LMNA-208ENST00000448611 AEBP2Q6ZN18 517 aaPredicted RBP23.57■■□□□ 1.36
LMNA-208ENST00000448611 TBX22Q9Y458 520 aa23.57■■□□□ 1.36
LMNA-208ENST00000448611 DIP2AQ14689 1571 aa23.56■■□□□ 1.36
LMNA-208ENST00000448611 ADGRB2O60241 1585 aa23.55■■□□□ 1.36
LMNA-208ENST00000448611 FYB1O15117 783 aa23.55■■□□□ 1.36
LMNA-208ENST00000448611 ANKLE2Q86XL3 938 aa23.55■■□□□ 1.36
LMNA-208ENST00000448611 ANKRD26Q9UPS8 1709 aa23.55■■□□□ 1.36
LMNA-208ENST00000448611 SHPRHQ149N8 1683 aa23.55■■□□□ 1.36
LMNA-208ENST00000448611 MTHFSP49914 203 aa23.53■■□□□ 1.36
LMNA-208ENST00000448611 IRX6P78412 446 aaPredicted RBP23.53■■□□□ 1.36
LMNA-208ENST00000448611 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.53■■□□□ 1.36
LMNA-208ENST00000448611 RNF123Q5XPI4 1314 aa23.53■■□□□ 1.36
LMNA-208ENST00000448611 CPSF1Q10570 1443 aaKnown RBP23.53■■□□□ 1.36
LMNA-208ENST00000448611 PPIP5K1Q6PFW1 1433 aa23.53■■□□□ 1.36
LMNA-208ENST00000448611 GGNBP2Q9H3C7 697 aa23.53■■□□□ 1.36
LMNA-208ENST00000448611 ERICH6BQ5W0A0 696 aa23.51■■□□□ 1.35
LMNA-208ENST00000448611 NUDT16Q96DE0 195 aaKnown RBP23.51■■□□□ 1.35
LMNA-208ENST00000448611 KIF20BQ96Q89 1820 aa23.5■■□□□ 1.35
LMNA-208ENST00000448611 CDCA7LQ96GN5 454 aa23.5■■□□□ 1.35
LMNA-208ENST00000448611 AMOTL2Q9Y2J4 779 aa23.5■■□□□ 1.35
LMNA-208ENST00000448611 PTCH1Q13635 1447 aa23.5■■□□□ 1.35
LMNA-208ENST00000448611 CCDC61Q9Y6R9 512 aa23.49■■□□□ 1.35
LMNA-208ENST00000448611 NCKAP5LQ9HCH0 1330 aa23.49■■□□□ 1.35
LMNA-208ENST00000448611 CDC42BPGQ6DT37 1551 aa23.49■■□□□ 1.35
LMNA-208ENST00000448611 CCDC146Q8IYE0 955 aa23.49■■□□□ 1.35
LMNA-208ENST00000448611 ZNF521Q96K83 1311 aa23.49■■□□□ 1.35
LMNA-208ENST00000448611 CFAP53Q96M91 514 aa23.48■■□□□ 1.35
LMNA-208ENST00000448611 PRR36Q9H6K5 1346 aa23.47■■□□□ 1.35
LMNA-208ENST00000448611 EDC4Q6P2E9 1401 aaKnown RBP23.46■■□□□ 1.35
LMNA-208ENST00000448611 XRN1Q8IZH2 1706 aaKnown RBP23.46■■□□□ 1.35
LMNA-208ENST00000448611 MON2Q7Z3U7 1717 aa23.43■■□□□ 1.34
LMNA-208ENST00000448611 APAF1O14727 1248 aa23.43■■□□□ 1.34
LMNA-208ENST00000448611 PIK3R4Q99570 1358 aa23.43■■□□□ 1.34
LMNA-208ENST00000448611 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.43■■□□□ 1.34
LMNA-208ENST00000448611 TOPAZ1Q8N9V7 1692 aa23.42■■□□□ 1.34
LMNA-208ENST00000448611 AKAP12Q02952 1782 aa23.42■■□□□ 1.34
LMNA-208ENST00000448611 COL3A1P02461 1466 aaPredicted RBP23.42■■□□□ 1.34
LMNA-208ENST00000448611 NGEFQ8N5V2 710 aa23.41■■□□□ 1.34
LMNA-208ENST00000448611 NPHP4O75161 1426 aaPredicted RBP23.4■■□□□ 1.34
LMNA-208ENST00000448611 ITSN1Q15811 1721 aa23.4■■□□□ 1.34
LMNA-208ENST00000448611 RCAN3Q9UKA8 241 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms