RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 NPHP4O75161 1426 aaPredicted RBP34.27■■■■□ 3.08
RFFL-206ENST00000447669 DIP2AQ14689 1571 aa34.27■■■■□ 3.08
RFFL-206ENST00000447669 CPS1P31327 1500 aa34.26■■■■□ 3.08
RFFL-206ENST00000447669 SRPK2P78362 688 aaKnown RBP34.23■■■■□ 3.07
RFFL-206ENST00000447669 KCNA6P17658 529 aa34.22■■■■□ 3.07
RFFL-206ENST00000447669 TMC1Q8TDI8 760 aa34.22■■■■□ 3.07
RFFL-206ENST00000447669 LMTK3Q96Q04 1460 aa34.22■■■■□ 3.07
RFFL-206ENST00000447669 SLC12A5Q9H2X9 1139 aa34.21■■■■□ 3.07
RFFL-206ENST00000447669 FAM135BQ49AJ0 1406 aa34.21■■■■□ 3.07
RFFL-206ENST00000447669 PER1O15534 1290 aaPredicted RBP34.21■■■■□ 3.07
RFFL-206ENST00000447669 CDK19Q9BWU1 502 aa34.21■■■■□ 3.07
RFFL-206ENST00000447669 SIRT1Q96EB6 747 aa34.2■■■■□ 3.06
RFFL-206ENST00000447669 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.17■■■■□ 3.06
RFFL-206ENST00000447669 PRKRIP1Q9H875 184 aaPredicted RBP34.17■■■■□ 3.06
RFFL-206ENST00000447669 XRN1Q8IZH2 1706 aaKnown RBP34.16■■■■□ 3.06
RFFL-206ENST00000447669 CHD2O14647 1828 aaKnown RBP34.15■■■■□ 3.06
RFFL-206ENST00000447669 RBM33Q96EV2 1170 aaKnown RBP34.15■■■■□ 3.06
RFFL-206ENST00000447669 PIK3R4Q99570 1358 aa34.11■■■■□ 3.05
RFFL-206ENST00000447669 WASLO00401 505 aaPredicted RBP34.11■■■■□ 3.05
RFFL-206ENST00000447669 CARD14Q9BXL6 1004 aa34.1■■■■□ 3.05
RFFL-206ENST00000447669 PTCH1Q13635 1447 aa34.09■■■■□ 3.05
RFFL-206ENST00000447669 CC2D1BQ5T0F9 858 aaKnown RBP34.09■■■■□ 3.05
RFFL-206ENST00000447669 PUS7Q96PZ0 661 aaKnown RBP34.07■■■■□ 3.04
RFFL-206ENST00000447669 NUTM2FA1L443 756 aa34.06■■■■□ 3.04
RFFL-206ENST00000447669 CCDC184Q52MB2 194 aa34.05■■■■□ 3.04
RFFL-206ENST00000447669 KNSTRNQ9Y448 316 aa34.04■■■■□ 3.04
RFFL-206ENST00000447669 STRCQ7RTU9 1775 aa34.04■■■■□ 3.04
RFFL-206ENST00000447669 CABP1Q9NZU7 370 aa34.03■■■■□ 3.04
RFFL-206ENST00000447669 YTHDC1Q96MU7 727 aaKnown RBP34.02■■■■□ 3.04
RFFL-206ENST00000447669 ATAD2Q6PL18 1390 aa34.01■■■■□ 3.04
RFFL-206ENST00000447669 AMER1Q5JTC6 1135 aaPredicted RBP33.99■■■■□ 3.03
RFFL-206ENST00000447669 PRR36Q9H6K5 1346 aa33.98■■■■□ 3.03
RFFL-206ENST00000447669 CCER2I3L3R5 266 aa33.98■■■■□ 3.03
RFFL-206ENST00000447669 NUDT16Q96DE0 195 aaKnown RBP33.98■■■■□ 3.03
RFFL-206ENST00000447669 ADGRB2O60241 1585 aa33.96■■■■□ 3.03
RFFL-206ENST00000447669 KTN1Q86UP2 1357 aaKnown RBP33.96■■■■□ 3.03
RFFL-206ENST00000447669 NSD3Q9BZ95 1437 aa33.95■■■■□ 3.03
RFFL-206ENST00000447669 A0A1W2PP64 1363 aa33.94■■■■□ 3.02
RFFL-206ENST00000447669 CD163L1Q9NR16 1453 aa33.94■■■■□ 3.02
RFFL-206ENST00000447669 ANKRD36BQ8N2N9 1353 aa33.93■■■■□ 3.02
RFFL-206ENST00000447669 STRCP1A6NGW2 1772 aa33.92■■■■□ 3.02
RFFL-206ENST00000447669 PPIP5K1Q6PFW1 1433 aa33.91■■■■□ 3.02
RFFL-206ENST00000447669 ATP7BP35670 1465 aa33.91■■■■□ 3.02
RFFL-206ENST00000447669 NALCNQ8IZF0 1738 aa33.9■■■■□ 3.02
RFFL-206ENST00000447669 PARD3Q8TEW0 1356 aa33.9■■■■□ 3.02
RFFL-206ENST00000447669 NWD1Q149M9 1564 aa33.89■■■■□ 3.02
RFFL-206ENST00000447669 CCDC61Q9Y6R9 512 aa33.88■■■■□ 3.01
RFFL-206ENST00000447669 NINLQ9Y2I6 1382 aa33.88■■■■□ 3.01
RFFL-206ENST00000447669 RGPD8O14715 1765 aaPredicted RBP33.88■■■■□ 3.01
RFFL-206ENST00000447669 RALBP1Q15311 655 aa33.87■■■■□ 3.01
RFFL-206ENST00000447669 PROSER2Q86WR7 435 aaPredicted RBP33.87■■■■□ 3.01
RFFL-206ENST00000447669 TERF2IPQ9NYB0 399 aa33.86■■■■□ 3.01
RFFL-206ENST00000447669 USP32Q8NFA0 1604 aa33.85■■■■□ 3.01
RFFL-206ENST00000447669 C14orf37Q86TY3 774 aa33.84■■■■□ 3.01
RFFL-206ENST00000447669 MRS2Q9HD23 443 aa33.84■■■■□ 3.01
RFFL-206ENST00000447669 MYBBP1AQ9BQG0 1328 aaKnown RBP33.82■■■■□ 3
RFFL-206ENST00000447669 HDGFL2Q7Z4V5 671 aaPredicted RBP33.82■■■■□ 3
RFFL-206ENST00000447669 PMFBP1Q8TBY8 1022 aa33.79■■■■□ 3
RFFL-206ENST00000447669 ADGRL3Q9HAR2 1447 aa33.78■■■■□ 3
RFFL-206ENST00000447669 TOPAZ1Q8N9V7 1692 aa33.77■■■■□ 3
RFFL-206ENST00000447669 NPC1L1Q9UHC9 1359 aa33.77■■■■□ 3
RFFL-206ENST00000447669 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.77■■■■□ 33e-6■■□□□ 13.9
RFFL-206ENST00000447669 NKTRP30414 1462 aaKnown RBP33.77■■■■□ 3
RFFL-206ENST00000447669 CGNL1Q0VF96 1302 aa33.77■■■■□ 3
RFFL-206ENST00000447669 ZNF335Q9H4Z2 1342 aaPredicted RBP33.77■■■■□ 3
RFFL-206ENST00000447669 FMN2Q9NZ56 1722 aa33.76■■■■□ 3
RFFL-206ENST00000447669 CPSF1Q10570 1443 aaKnown RBP33.76■■■□□ 2.99
RFFL-206ENST00000447669 TNNT2P45379 298 aaPredicted RBP33.75■■■□□ 2.99
RFFL-206ENST00000447669 CDC42BPGQ6DT37 1551 aa33.74■■■□□ 2.99
RFFL-206ENST00000447669 ACEP12821 1306 aa33.74■■■□□ 2.99
RFFL-206ENST00000447669 GGNBP2Q9H3C7 697 aa33.74■■■□□ 2.99
RFFL-206ENST00000447669 TMEM94Q12767 1356 aa33.73■■■□□ 2.99
RFFL-206ENST00000447669 PPP2R1AP30153 589 aa33.72■■■□□ 2.99
RFFL-206ENST00000447669 FAM9BQ8IZU0 186 aa33.72■■■□□ 2.99
RFFL-206ENST00000447669 PLEKHG3A1L390 1219 aa33.7■■■□□ 2.99
RFFL-206ENST00000447669 FYB1O15117 783 aa33.7■■■□□ 2.99
RFFL-206ENST00000447669 ITSN1Q15811 1721 aa33.7■■■□□ 2.99
RFFL-206ENST00000447669 AKAP12Q02952 1782 aa33.69■■■□□ 2.98
RFFL-206ENST00000447669 MORC1Q86VD1 984 aa33.69■■■□□ 2.98
RFFL-206ENST00000447669 NLRP13Q86W25 1043 aa33.69■■■□□ 2.98
RFFL-206ENST00000447669 MON2Q7Z3U7 1717 aa33.66■■■□□ 2.98
RFFL-206ENST00000447669 ZRANB1Q9UGI0 708 aa33.65■■■□□ 2.98
RFFL-206ENST00000447669 BRD4O60885 1362 aaPredicted RBP33.65■■■□□ 2.98
RFFL-206ENST00000447669 ANKARQ7Z5J8 1434 aa33.64■■■□□ 2.98
RFFL-206ENST00000447669 NME9Q86XW9 330 aa33.63■■■□□ 2.97
RFFL-206ENST00000447669 NGDNQ8NEJ9 315 aaKnown RBP33.63■■■□□ 2.97
RFFL-206ENST00000447669 C19orf44Q9H6X5 657 aa33.63■■■□□ 2.97
RFFL-206ENST00000447669 EDC4Q6P2E9 1401 aaKnown RBP33.62■■■□□ 2.97
RFFL-206ENST00000447669 XIRP1Q702N8 1843 aaKnown RBP33.62■■■□□ 2.97
RFFL-206ENST00000447669 ZNF692Q9BU19 519 aaPredicted RBP33.62■■■□□ 2.97
RFFL-206ENST00000447669 KIF20BQ96Q89 1820 aa33.61■■■□□ 2.97
RFFL-206ENST00000447669 ESCO1Q5FWF5 840 aa33.61■■■□□ 2.97
RFFL-206ENST00000447669 ORAI2Q96SN7 254 aa33.6■■■□□ 2.97
RFFL-206ENST00000447669 PNISRQ8TF01 805 aaKnown RBP33.59■■■□□ 2.97
RFFL-206ENST00000447669 FBLN1P23142 703 aa33.58■■■□□ 2.97
RFFL-206ENST00000447669 NSD2O96028 1365 aa33.58■■■□□ 2.97
RFFL-206ENST00000447669 USP6P35125 1406 aa33.58■■■□□ 2.97
RFFL-206ENST00000447669 DMRT2Q9Y5R5 561 aa33.57■■■□□ 2.96
RFFL-206ENST00000447669 LRRC7Q96NW7 1537 aa33.57■■■□□ 2.96
RFFL-206ENST00000447669 PHF8Q9UPP1 1060 aa33.57■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms