RNA–Protein interactions for RNA: ENST00000446008.5

UBE2D4-206, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2 BASIC

Gene UBE2D4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-206ENST00000446008 REM2Q8IYK8 340 aaPredicted RBP15.32■□□□□ 0.04
UBE2D4-206ENST00000446008 MST1RQ04912 1400 aa15.32■□□□□ 0.04
UBE2D4-206ENST00000446008 RBM6P78332 1123 aaKnown RBP15.31■□□□□ 0.04
UBE2D4-206ENST00000446008 FAM50AQ14320 339 aaKnown RBP15.31■□□□□ 0.04
UBE2D4-206ENST00000446008 QTRT2Q9H974 415 aaKnown RBP15.31■□□□□ 0.04
UBE2D4-206ENST00000446008 XRN1Q8IZH2 1706 aaKnown RBP15.31■□□□□ 0.04
UBE2D4-206ENST00000446008 IQGAP3Q86VI3 1631 aa15.29■□□□□ 0.04
UBE2D4-206ENST00000446008 RGS12O14924 1447 aa15.29■□□□□ 0.04
UBE2D4-206ENST00000446008 NRXN3Q9Y4C0 1643 aa15.28■□□□□ 0.04
UBE2D4-206ENST00000446008 PNPLA6Q8IY17 1366 aa15.28■□□□□ 0.04
UBE2D4-206ENST00000446008 SETBP1Q9Y6X0 1596 aa15.28■□□□□ 0.04
UBE2D4-206ENST00000446008 C8orf37Q96NL8 207 aa15.27■□□□□ 0.04
UBE2D4-206ENST00000446008 ROCK1Q13464 1354 aa15.25■□□□□ 0.03
UBE2D4-206ENST00000446008 NGLY1Q96IV0 654 aa15.25■□□□□ 0.03
UBE2D4-206ENST00000446008 ADGRL3Q9HAR2 1447 aa15.25■□□□□ 0.03
UBE2D4-206ENST00000446008 DDX17Q92841 729 aaKnown RBP15.24■□□□□ 0.03
UBE2D4-206ENST00000446008 METP08581 1390 aa15.24■□□□□ 0.03
UBE2D4-206ENST00000446008 LAMC1P11047 1609 aa15.23■□□□□ 0.03
UBE2D4-206ENST00000446008 NUP155O75694 1391 aa15.23■□□□□ 0.03
UBE2D4-206ENST00000446008 NALCNQ8IZF0 1738 aa15.21■□□□□ 0.03
UBE2D4-206ENST00000446008 FKBP8Q14318 412 aa15.21■□□□□ 0.03
UBE2D4-206ENST00000446008 ATAD2Q6PL18 1390 aa15.21■□□□□ 0.02
UBE2D4-206ENST00000446008 C1orf167Q5SNV9 1468 aa15.2■□□□□ 0.02
UBE2D4-206ENST00000446008 SPHKAPQ2M3C7 1700 aa15.2■□□□□ 0.02
UBE2D4-206ENST00000446008 SOS2Q07890 1332 aaPredicted RBP15.19■□□□□ 0.02
UBE2D4-206ENST00000446008 ADAMTS2O95450 1211 aa15.19■□□□□ 0.02
UBE2D4-206ENST00000446008 ZNF326Q5BKZ1 582 aaKnown RBP15.19■□□□□ 0.02
UBE2D4-206ENST00000446008 FNBP4Q8N3X1 1017 aaPredicted RBP15.19■□□□□ 0.02
UBE2D4-206ENST00000446008 TRPC5Q9UL62 973 aaPredicted RBP15.19■□□□□ 0.02
UBE2D4-206ENST00000446008 EP400Q96L91 3159 aa15.19■□□□□ 0.02
UBE2D4-206ENST00000446008 USP21Q9UK80 565 aa15.18■□□□□ 0.02
UBE2D4-206ENST00000446008 PTCH1Q13635 1447 aa15.17■□□□□ 0.02
UBE2D4-206ENST00000446008 ZRANB1Q9UGI0 708 aa15.16■□□□□ 0.02
UBE2D4-206ENST00000446008 NEXMIFQ5QGS0 1516 aa15.16■□□□□ 0.02
UBE2D4-206ENST00000446008 PITPNM1O00562 1244 aa15.15■□□□□ 0.02
UBE2D4-206ENST00000446008 CCDC125Q86Z20 511 aa15.15■□□□□ 0.02
UBE2D4-206ENST00000446008 SPDYE1Q8NFV5 336 aaPredicted RBP15.15■□□□□ 0.02
UBE2D4-206ENST00000446008 ORAI2Q96SN7 254 aa15.15■□□□□ 0.02
UBE2D4-206ENST00000446008 ATRNO75882 1429 aa15.15■□□□□ 0.02
UBE2D4-206ENST00000446008 COL22A1Q8NFW1 1626 aaPredicted RBP15.14■□□□□ 0.01
UBE2D4-206ENST00000446008 CHRDL2Q6WN34 429 aa15.13■□□□□ 0.01
UBE2D4-206ENST00000446008 PRAG1Q86YV5 1406 aa15.12■□□□□ 0.01
UBE2D4-206ENST00000446008 KIF1BO60333 1816 aa15.12■□□□□ 0.01
UBE2D4-206ENST00000446008 CLTCL1P53675 1640 aa15.11■□□□□ 0.01
UBE2D4-206ENST00000446008 CLEC11AQ9Y240 323 aa15.11■□□□□ 0.01
UBE2D4-206ENST00000446008 ROBO2Q9HCK4 1378 aa15.11■□□□□ 0.01
UBE2D4-206ENST00000446008 MYOM2P54296 1465 aa15.1■□□□□ 0.01
UBE2D4-206ENST00000446008 MARF1Q9Y4F3 1742 aaKnown RBP15.09■□□□□ 0.01
UBE2D4-206ENST00000446008 BCL9LQ86UU0 1499 aa15.09■□□□□ 0.01
UBE2D4-206ENST00000446008 VGFO15240 615 aaPredicted RBP15.09■□□□□ 0.01
UBE2D4-206ENST00000446008 HFM1A2PYH4 1435 aa15.09■□□□□ 0.01
UBE2D4-206ENST00000446008 GJD4Q96KN9 370 aaPredicted RBP15.07■□□□□ 0
UBE2D4-206ENST00000446008 NPHP3Q7Z494 1330 aa15.07■□□□□ 0
UBE2D4-206ENST00000446008 ITGAEP38570 1179 aa15.06■□□□□ 0
UBE2D4-206ENST00000446008 PROM2Q8N271 834 aa15.05■□□□□ -0
UBE2D4-206ENST00000446008 RPGRIP1LQ68CZ1 1315 aa15.05■□□□□ -0
UBE2D4-206ENST00000446008 PXDNQ92626 1479 aa15.05■□□□□ -0
UBE2D4-206ENST00000446008 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.05■□□□□ -0
UBE2D4-206ENST00000446008 ESCO1Q5FWF5 840 aa15.04■□□□□ -0
UBE2D4-206ENST00000446008 CDC42BPGQ6DT37 1551 aa15.02■□□□□ -0
UBE2D4-206ENST00000446008 BLMP54132 1417 aaPredicted RBP15.01□□□□□ -0.01
UBE2D4-206ENST00000446008 LRPPRCP42704 1394 aaKnown RBP15.01□□□□□ -0.01
UBE2D4-206ENST00000446008 FOXO3O43524 673 aa15.01□□□□□ -0.01
UBE2D4-206ENST00000446008 UNC5CLQ8IV45 518 aa15.01□□□□□ -0.01
UBE2D4-206ENST00000446008 SLIT2O94813 1529 aa15.01□□□□□ -0.01
UBE2D4-206ENST00000446008 PPLO60437 1756 aa15.01□□□□□ -0.01
UBE2D4-206ENST00000446008 GLI3P10071 1580 aa15□□□□□ -0.01
UBE2D4-206ENST00000446008 BRWD3Q6RI45 1802 aa14.99□□□□□ -0.01
UBE2D4-206ENST00000446008 RALGAPBQ86X10 1494 aa14.99□□□□□ -0.01
UBE2D4-206ENST00000446008 XPCQ01831 940 aaPredicted RBP14.98□□□□□ -0.01
UBE2D4-206ENST00000446008 SPATA31A3Q5VYP0 1347 aa14.97□□□□□ -0.01
UBE2D4-206ENST00000446008 NAIPQ13075 1403 aa14.97□□□□□ -0.01
UBE2D4-206ENST00000446008 TECPR2O15040 1411 aa14.96□□□□□ -0.01
UBE2D4-206ENST00000446008 DEFB132Q7Z7B7 95 aa14.96□□□□□ -0.01
UBE2D4-206ENST00000446008 ONECUT3O60422 494 aaPredicted RBP14.95□□□□□ -0.02
UBE2D4-206ENST00000446008 LRP5O75197 1615 aa14.95□□□□□ -0.02
UBE2D4-206ENST00000446008 PRR29P0C7W0 189 aa14.94□□□□□ -0.02
UBE2D4-206ENST00000446008 SF3B2Q13435 895 aaKnown RBP14.94□□□□□ -0.02
UBE2D4-206ENST00000446008 WAPLQ7Z5K2 1190 aa14.94□□□□□ -0.02
UBE2D4-206ENST00000446008 SEPT12Q8IYM1 358 aa14.94□□□□□ -0.02
UBE2D4-206ENST00000446008 USP32Q8NFA0 1604 aa14.93□□□□□ -0.02
UBE2D4-206ENST00000446008 NUTM2FA1L443 756 aa14.93□□□□□ -0.02
UBE2D4-206ENST00000446008 VPS72Q15906 364 aa14.93□□□□□ -0.02
UBE2D4-206ENST00000446008 KRT28Q7Z3Y7 464 aa14.93□□□□□ -0.02
UBE2D4-206ENST00000446008 ABCC11Q96J66 1382 aa14.93□□□□□ -0.02
UBE2D4-206ENST00000446008 KIF1AQ12756 1690 aa14.93□□□□□ -0.02
UBE2D4-206ENST00000446008 CCDC144AA2RUR9 1427 aa14.92□□□□□ -0.02
UBE2D4-206ENST00000446008 FMN2Q9NZ56 1722 aa14.92□□□□□ -0.02
UBE2D4-206ENST00000446008 KNDC1Q76NI1 1749 aa14.92□□□□□ -0.02
UBE2D4-206ENST00000446008 ADGRF5Q8IZF2 1346 aa14.92□□□□□ -0.02
UBE2D4-206ENST00000446008 NWD2Q9ULI1 1742 aa14.91□□□□□ -0.02
UBE2D4-206ENST00000446008 FXR2P51116 673 aaKnown RBP eCLIP14.9□□□□□ -0.02
UBE2D4-206ENST00000446008 KRT27Q7Z3Y8 459 aa14.9□□□□□ -0.02
UBE2D4-206ENST00000446008 STK26Q9P289 416 aa14.9□□□□□ -0.02
UBE2D4-206ENST00000446008 RRBP1Q9P2E9 1410 aaKnown RBP14.9□□□□□ -0.02
UBE2D4-206ENST00000446008 PIP4P2Q8N4L2 257 aa14.89□□□□□ -0.03
UBE2D4-206ENST00000446008 SIRT1Q96EB6 747 aa14.89□□□□□ -0.03
UBE2D4-206ENST00000446008 PLEKHH1Q9ULM0 1364 aa14.88□□□□□ -0.03
UBE2D4-206ENST00000446008 PLCH1Q4KWH8 1693 aa14.88□□□□□ -0.03
UBE2D4-206ENST00000446008 PSME1Q06323 249 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms