RNA–Protein interactions for RNA: ENST00000446008.5

UBE2D4-206, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2 BASIC

Gene UBE2D4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-206ENST00000446008 AEBP2Q6ZN18 517 aaPredicted RBP27.76■■■□□ 2.03
UBE2D4-206ENST00000446008 CHIC1Q5VXU3 224 aa26.94■■□□□ 1.9
UBE2D4-206ENST00000446008 NISCHQ9Y2I1 1504 aa25.27■■□□□ 1.64
UBE2D4-206ENST00000446008 PHF23Q9BUL5 403 aaPredicted RBP23.66■■□□□ 1.38
UBE2D4-206ENST00000446008 SENP3Q9H4L4 574 aaPredicted RBP23.61■■□□□ 1.37
UBE2D4-206ENST00000446008 ABCC9O60706 1549 aa23.13■■□□□ 1.29
UBE2D4-206ENST00000446008 CCDC180Q9P1Z9 1646 aa22.84■■□□□ 1.25
UBE2D4-206ENST00000446008 DNAJC5BQ9UF47 199 aa22.05■■□□□ 1.12
UBE2D4-206ENST00000446008 FOXD1Q16676 465 aa21.92■■□□□ 1.1
UBE2D4-206ENST00000446008 RB1CC1Q8TDY2 1594 aa21.91■■□□□ 1.1
UBE2D4-206ENST00000446008 PLPPR3Q6T4P5 718 aa21.81■■□□□ 1.08
UBE2D4-206ENST00000446008 NACADO15069 1562 aa21.68■■□□□ 1.06
UBE2D4-206ENST00000446008 PABPN1Q86U42 306 aaKnown RBP eCLIP21.48■■□□□ 1.03
UBE2D4-206ENST00000446008 DCAF8L2P0C7V8 631 aa21.42■■□□□ 1.02
UBE2D4-206ENST00000446008 UNC13AQ9UPW8 1703 aa21.42■■□□□ 1.02
UBE2D4-206ENST00000446008 MYO15BQ96JP2 1530 aa21.31■■□□□ 1
UBE2D4-206ENST00000446008 BICRAQ9NZM4 1560 aa21.28■■□□□ 1
UBE2D4-206ENST00000446008 SHROOM4Q9ULL8 1493 aa21■□□□□ 0.95
UBE2D4-206ENST00000446008 PPP6R1Q9UPN7 881 aa20.94■□□□□ 0.94
UBE2D4-206ENST00000446008 ADRA2BP18089 450 aa20.93■□□□□ 0.94
UBE2D4-206ENST00000446008 CC2D2AQ9P2K1 1620 aa20.9■□□□□ 0.94
UBE2D4-206ENST00000446008 DCAF1Q9Y4B6 1507 aa20.89■□□□□ 0.94
UBE2D4-206ENST00000446008 CECR2Q9BXF3 1484 aa20.89■□□□□ 0.94
UBE2D4-206ENST00000446008 ZCCHC6Q5VYS8 1495 aaKnown RBP20.86■□□□□ 0.93
UBE2D4-206ENST00000446008 EIF4G1Q04637 1599 aaKnown RBP20.78■□□□□ 0.92
UBE2D4-206ENST00000446008 SCRIBQ14160 1630 aa20.72■□□□□ 0.91
UBE2D4-206ENST00000446008 PIAS4Q8N2W9 510 aaPredicted RBP20.65■□□□□ 0.9
UBE2D4-206ENST00000446008 DNAJC5Q9H3Z4 198 aa20.54■□□□□ 0.88
UBE2D4-206ENST00000446008 MSH5O43196 834 aa20.31■□□□□ 0.84
UBE2D4-206ENST00000446008 CUX2O14529 1486 aa20.13■□□□□ 0.81
UBE2D4-206ENST00000446008 NCAPD3P42695 1498 aa20.04■□□□□ 0.8
UBE2D4-206ENST00000446008 ERCC6Q03468 1493 aa19.99■□□□□ 0.79
UBE2D4-206ENST00000446008 ATAD2BQ9ULI0 1458 aa19.9■□□□□ 0.78
UBE2D4-206ENST00000446008 HMGXB3Q12766 1538 aa19.83■□□□□ 0.77
UBE2D4-206ENST00000446008 SMARCA2P51531 1590 aa19.83■□□□□ 0.76
UBE2D4-206ENST00000446008 NESP48681 1621 aa19.77■□□□□ 0.76
UBE2D4-206ENST00000446008 SMARCA4P51532 1647 aa19.77■□□□□ 0.76
UBE2D4-206ENST00000446008 BAZ1BQ9UIG0 1483 aaKnown RBP19.67■□□□□ 0.74
UBE2D4-206ENST00000446008 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
UBE2D4-206ENST00000446008 BAZ1AQ9NRL2 1556 aaPredicted RBP19.63■□□□□ 0.73
UBE2D4-206ENST00000446008 LAMC3Q9Y6N6 1575 aa19.63■□□□□ 0.73
UBE2D4-206ENST00000446008 PEG3Q9GZU2 1588 aa19.62■□□□□ 0.73
UBE2D4-206ENST00000446008 KIF21AQ7Z4S6 1674 aa19.52■□□□□ 0.72
UBE2D4-206ENST00000446008 PDS5BQ9NTI5 1447 aa19.51■□□□□ 0.71
UBE2D4-206ENST00000446008 MROH2BQ7Z745 1585 aa19.45■□□□□ 0.7
UBE2D4-206ENST00000446008 TRIM41Q8WV44 630 aa19.41■□□□□ 0.7
UBE2D4-206ENST00000446008 CADPSQ9ULU8 1353 aa19.4■□□□□ 0.7
UBE2D4-206ENST00000446008 MRC2Q9UBG0 1479 aa19.35■□□□□ 0.69
UBE2D4-206ENST00000446008 WDR62O43379 1518 aa19.32■□□□□ 0.68
UBE2D4-206ENST00000446008 CEP164Q9UPV0 1460 aa19.2■□□□□ 0.66
UBE2D4-206ENST00000446008 PPP4R3CPQ6ZMV5 832 aa19.19■□□□□ 0.66
UBE2D4-206ENST00000446008 WIZO95785 1651 aa19.19■□□□□ 0.66
UBE2D4-206ENST00000446008 SCAF1Q9H7N4 1312 aaKnown RBP19.18■□□□□ 0.66
UBE2D4-206ENST00000446008 OSCARQ8IYS5 282 aa19.16■□□□□ 0.66
UBE2D4-206ENST00000446008 FANCD2Q9BXW9 1451 aa19.15■□□□□ 0.66
UBE2D4-206ENST00000446008 CFTRP13569 1480 aa19.1■□□□□ 0.65
UBE2D4-206ENST00000446008 MAPK8IP2Q13387 824 aaPredicted RBP19.04■□□□□ 0.64
UBE2D4-206ENST00000446008 URB2Q14146 1524 aaKnown RBP19.01■□□□□ 0.63
UBE2D4-206ENST00000446008 RSF1Q96T23 1441 aaPredicted RBP18.93■□□□□ 0.62
UBE2D4-206ENST00000446008 TOP2AP11388 1531 aaKnown RBP18.93■□□□□ 0.62
UBE2D4-206ENST00000446008 RIMBP3CA6NJZ7 1639 aa18.92■□□□□ 0.62
UBE2D4-206ENST00000446008 RIMBP3BA6NNM3 1639 aa18.92■□□□□ 0.62
UBE2D4-206ENST00000446008 RIMBP3Q9UFD9 1639 aa18.92■□□□□ 0.62
UBE2D4-206ENST00000446008 PRDM2Q13029 1718 aa18.88■□□□□ 0.61
UBE2D4-206ENST00000446008 IFT140Q96RY7 1462 aa18.84■□□□□ 0.61
UBE2D4-206ENST00000446008 ZNF608Q9ULD9 1512 aaPredicted RBP18.83■□□□□ 0.6
UBE2D4-206ENST00000446008 ARHGEF11O15085 1522 aa18.82■□□□□ 0.6
UBE2D4-206ENST00000446008 POTEDQ86YR6 584 aa18.81■□□□□ 0.6
UBE2D4-206ENST00000446008 DMRT2Q9Y5R5 561 aa18.8■□□□□ 0.6
UBE2D4-206ENST00000446008 TOPBP1Q92547 1522 aa18.74■□□□□ 0.59
UBE2D4-206ENST00000446008 CCDC88BA6NC98 1476 aa18.73■□□□□ 0.59
UBE2D4-206ENST00000446008 ABCC8Q09428 1581 aa18.72■□□□□ 0.59
UBE2D4-206ENST00000446008 CYB5RLQ6IPT4 315 aa18.7■□□□□ 0.58
UBE2D4-206ENST00000446008 CNKSR2Q8WXI2 1034 aa18.7■□□□□ 0.58
UBE2D4-206ENST00000446008 EIF4G3O43432 1585 aaKnown RBP18.69■□□□□ 0.58
UBE2D4-206ENST00000446008 NCBP3Q53F19 620 aaKnown RBP18.66■□□□□ 0.58
UBE2D4-206ENST00000446008 DNMBPQ6XZF7 1577 aa18.65■□□□□ 0.58
UBE2D4-206ENST00000446008 CHD1O14646 1710 aa18.63■□□□□ 0.57
UBE2D4-206ENST00000446008 TARBP1Q13395 1621 aaKnown RBP18.63■□□□□ 0.57
UBE2D4-206ENST00000446008 AQRO60306 1485 aaKnown RBP eCLIP18.62■□□□□ 0.57
UBE2D4-206ENST00000446008 ARAP1Q96P48 1450 aa18.61■□□□□ 0.57
UBE2D4-206ENST00000446008 TRHP20396 242 aaPredicted RBP18.59■□□□□ 0.57
UBE2D4-206ENST00000446008 FBLN2P98095 1184 aa18.54■□□□□ 0.56
UBE2D4-206ENST00000446008 POLA1P09884 1462 aaPredicted RBP18.53■□□□□ 0.56
UBE2D4-206ENST00000446008 KCNA4P22459 653 aa18.52■□□□□ 0.56
UBE2D4-206ENST00000446008 RAD54L2Q9Y4B4 1467 aa18.46■□□□□ 0.54
UBE2D4-206ENST00000446008 SOGA1O94964 1423 aa18.45■□□□□ 0.54
UBE2D4-206ENST00000446008 TDRD9Q8NDG6 1382 aaKnown RBP18.44■□□□□ 0.54
UBE2D4-206ENST00000446008 CLASP1Q7Z460 1538 aa18.44■□□□□ 0.54
UBE2D4-206ENST00000446008 WDR97A6NE52 1622 aa18.43■□□□□ 0.54
UBE2D4-206ENST00000446008 SNAPC4Q5SXM2 1469 aa18.4■□□□□ 0.54
UBE2D4-206ENST00000446008 CHMP7Q8WUX9 453 aaPredicted RBP18.39■□□□□ 0.53
UBE2D4-206ENST00000446008 SYNJ1O43426 1573 aa18.38■□□□□ 0.53
UBE2D4-206ENST00000446008 RNF216Q9NWF9 866 aaPredicted RBP18.37■□□□□ 0.53
UBE2D4-206ENST00000446008 MAGI1Q96QZ7 1491 aaPredicted RBP18.37■□□□□ 0.53
UBE2D4-206ENST00000446008 FGD5Q6ZNL6 1462 aa18.35■□□□□ 0.53
UBE2D4-206ENST00000446008 NPM3O75607 178 aaKnown RBP18.35■□□□□ 0.53
UBE2D4-206ENST00000446008 GRIN2BQ13224 1484 aa18.33■□□□□ 0.53
UBE2D4-206ENST00000446008 HOXD11P31277 338 aaPredicted RBP18.33■□□□□ 0.52
UBE2D4-206ENST00000446008 SYNJ2O15056 1496 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms