RNA–Protein interactions for RNA: ENST00000444184.5

LINC00963-205, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 1,887 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-205ENST00000444184 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.91■■□□□ 1.74
LINC00963-205ENST00000444184 PRAM1Q96QH2 718 aa25.91■■□□□ 1.74
LINC00963-205ENST00000444184 CABP2Q9NPB3 220 aa25.91■■□□□ 1.74
LINC00963-205ENST00000444184 PDE3BQ13370 1112 aa25.9■■□□□ 1.74
LINC00963-205ENST00000444184 PTPRMP28827 1452 aa25.9■■□□□ 1.74
LINC00963-205ENST00000444184 CEBPAP49715 358 aaPredicted RBP25.87■■□□□ 1.73
LINC00963-205ENST00000444184 UBR1Q8IWV7 1749 aa25.87■■□□□ 1.73
LINC00963-205ENST00000444184 HDGFP51858 240 aaKnown RBP25.87■■□□□ 1.73
LINC00963-205ENST00000444184 SRPK2P78362 688 aaKnown RBP25.87■■□□□ 1.73
LINC00963-205ENST00000444184 MORC1Q86VD1 984 aa25.86■■□□□ 1.73
LINC00963-205ENST00000444184 MINK1Q8N4C8 1332 aaPredicted RBP25.86■■□□□ 1.73
LINC00963-205ENST00000444184 NLRP1Q9C000 1473 aa25.85■■□□□ 1.73
LINC00963-205ENST00000444184 ANKRD36BQ8N2N9 1353 aa25.84■■□□□ 1.73
LINC00963-205ENST00000444184 CGNL1Q0VF96 1302 aa25.83■■□□□ 1.73
LINC00963-205ENST00000444184 NINLQ9Y2I6 1382 aa25.82■■□□□ 1.72
LINC00963-205ENST00000444184 ADAMTSL3P82987 1691 aa25.8■■□□□ 1.72
LINC00963-205ENST00000444184 ATAD2Q6PL18 1390 aa25.8■■□□□ 1.72
LINC00963-205ENST00000444184 RNF123Q5XPI4 1314 aa25.8■■□□□ 1.72
LINC00963-205ENST00000444184 PPP4R2Q9NY27 417 aa25.8■■□□□ 1.72
LINC00963-205ENST00000444184 RIMS1Q86UR5 1692 aaKnown RBP25.79■■□□□ 1.72
LINC00963-205ENST00000444184 USP32Q8NFA0 1604 aa25.78■■□□□ 1.72
LINC00963-205ENST00000444184 DLC1Q96QB1 1528 aa25.78■■□□□ 1.72
LINC00963-205ENST00000444184 SETD1AO15047 1707 aaKnown RBP25.77■■□□□ 1.72
LINC00963-205ENST00000444184 CDK19Q9BWU1 502 aa25.77■■□□□ 1.72
LINC00963-205ENST00000444184 ABCC11Q96J66 1382 aa25.77■■□□□ 1.72
LINC00963-205ENST00000444184 NRXN3Q9Y4C0 1643 aa25.76■■□□□ 1.71
LINC00963-205ENST00000444184 POLR3AO14802 1390 aaPredicted RBP25.76■■□□□ 1.71
LINC00963-205ENST00000444184 TMEM2Q9UHN6 1383 aa25.76■■□□□ 1.71
LINC00963-205ENST00000444184 TNNT2P45379 298 aaPredicted RBP25.75■■□□□ 1.71
LINC00963-205ENST00000444184 WAPLQ7Z5K2 1190 aa25.75■■□□□ 1.71
LINC00963-205ENST00000444184 CDCA7LQ96GN5 454 aa25.75■■□□□ 1.71
LINC00963-205ENST00000444184 NSD2O96028 1365 aa25.75■■□□□ 1.71
LINC00963-205ENST00000444184 TERF2IPQ9NYB0 399 aa25.74■■□□□ 1.71
LINC00963-205ENST00000444184 A0A1W2PP64 1363 aa25.73■■□□□ 1.71
LINC00963-205ENST00000444184 METP08581 1390 aa25.71■■□□□ 1.71
LINC00963-205ENST00000444184 RCAN3Q9UKA8 241 aa25.71■■□□□ 1.71
LINC00963-205ENST00000444184 PLPPR3Q6T4P5 718 aa25.7■■□□□ 1.7
LINC00963-205ENST00000444184 PLEKHH1Q9ULM0 1364 aa25.69■■□□□ 1.7
LINC00963-205ENST00000444184 CCDC146Q8IYE0 955 aa25.69■■□□□ 1.7
LINC00963-205ENST00000444184 HDGFL2Q7Z4V5 671 aaPredicted RBP25.68■■□□□ 1.7
LINC00963-205ENST00000444184 ARHGAP23Q9P227 1491 aa25.68■■□□□ 1.7
LINC00963-205ENST00000444184 SLIT1O75093 1534 aa25.67■■□□□ 1.7
LINC00963-205ENST00000444184 CABP1Q9NZU7 370 aa25.67■■□□□ 1.7
LINC00963-205ENST00000444184 MTHFSP49914 203 aa25.66■■□□□ 1.7
LINC00963-205ENST00000444184 SIRT1Q96EB6 747 aa25.66■■□□□ 1.7
LINC00963-205ENST00000444184 TXNDC2Q86VQ3 553 aa25.66■■□□□ 1.7
LINC00963-205ENST00000444184 CFAP53Q96M91 514 aa25.66■■□□□ 1.7
LINC00963-205ENST00000444184 TSHZ2Q9NRE2 1034 aa25.64■■□□□ 1.7
LINC00963-205ENST00000444184 CD163L1Q9NR16 1453 aa25.64■■□□□ 1.7
LINC00963-205ENST00000444184 ZNF521Q96K83 1311 aa25.64■■□□□ 1.69
LINC00963-205ENST00000444184 APAF1O14727 1248 aa25.64■■□□□ 1.69
LINC00963-205ENST00000444184 RRP1P56182 461 aaKnown RBP25.64■■□□□ 1.69
LINC00963-205ENST00000444184 CEP170BQ9Y4F5 1589 aaPredicted RBP25.62■■□□□ 1.69
LINC00963-205ENST00000444184 LTKP29376 864 aa25.62■■□□□ 1.69
LINC00963-205ENST00000444184 GOLGA2Q08379 1002 aa25.62■■□□□ 1.69
LINC00963-205ENST00000444184 GGNBP2Q9H3C7 697 aa25.62■■□□□ 1.69
LINC00963-205ENST00000444184 FAM135BQ49AJ0 1406 aa25.61■■□□□ 1.69
LINC00963-205ENST00000444184 WASLO00401 505 aaPredicted RBP25.61■■□□□ 1.69
LINC00963-205ENST00000444184 B4GALNT3Q6L9W6 998 aa25.61■■□□□ 1.69
LINC00963-205ENST00000444184 NGEFQ8N5V2 710 aa25.61■■□□□ 1.69
LINC00963-205ENST00000444184 PLEKHG1Q9ULL1 1385 aa25.61■■□□□ 1.69
LINC00963-205ENST00000444184 TECPR2O15040 1411 aa25.6■■□□□ 1.69
LINC00963-205ENST00000444184 FYB1O15117 783 aa25.6■■□□□ 1.69
LINC00963-205ENST00000444184 EID1Q9Y6B2 187 aa25.6■■□□□ 1.69
LINC00963-205ENST00000444184 ADAMTS13Q76LX8 1427 aa25.6■■□□□ 1.69
LINC00963-205ENST00000444184 THEMISQ8N1K5 641 aaPredicted RBP25.58■■□□□ 1.69
LINC00963-205ENST00000444184 ZNF142P52746 1687 aaPredicted RBP25.58■■□□□ 1.69
LINC00963-205ENST00000444184 KNDC1Q76NI1 1749 aa25.57■■□□□ 1.68
LINC00963-205ENST00000444184 MED14O60244 1454 aa25.56■■□□□ 1.68
LINC00963-205ENST00000444184 DUSP27Q5VZP5 1158 aa25.55■■□□□ 1.68
LINC00963-205ENST00000444184 SHPRHQ149N8 1683 aa25.55■■□□□ 1.68
LINC00963-205ENST00000444184 ATP7BP35670 1465 aa25.55■■□□□ 1.68
LINC00963-205ENST00000444184 SLFN5Q08AF3 891 aa25.54■■□□□ 1.68
LINC00963-205ENST00000444184 RUNDC1Q96C34 613 aa25.54■■□□□ 1.68
LINC00963-205ENST00000444184 CPS1P31327 1500 aa25.54■■□□□ 1.68
LINC00963-205ENST00000444184 SETD1BQ9UPS6 1966 aaKnown RBP25.53■■□□□ 1.68
LINC00963-205ENST00000444184 NUDT16Q96DE0 195 aaKnown RBP25.52■■□□□ 1.68
LINC00963-205ENST00000444184 ROBO2Q9HCK4 1378 aa25.51■■□□□ 1.67
LINC00963-205ENST00000444184 PPIP5K1Q6PFW1 1433 aa25.51■■□□□ 1.67
LINC00963-205ENST00000444184 SLC26A8Q96RN1 970 aa25.5■■□□□ 1.67
LINC00963-205ENST00000444184 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.49■■□□□ 1.67
LINC00963-205ENST00000444184 TRMT2AQ8IZ69 625 aaKnown RBP25.49■■□□□ 1.67
LINC00963-205ENST00000444184 CCDC136Q96JN2 1154 aa25.49■■□□□ 1.67
LINC00963-205ENST00000444184 ANKRD26Q9UPS8 1709 aa25.49■■□□□ 1.67
LINC00963-205ENST00000444184 CCDC61Q9Y6R9 512 aa25.49■■□□□ 1.67
LINC00963-205ENST00000444184 E9PSI1 815 aa25.48■■□□□ 1.67
LINC00963-205ENST00000444184 U2AF1L5P0DN76 240 aaPredicted RBP25.48■■□□□ 1.67
LINC00963-205ENST00000444184 U2AF1Q01081 240 aaKnown RBP eCLIP25.48■■□□□ 1.67
LINC00963-205ENST00000444184 TCP11L2Q8N4U5 519 aa25.47■■□□□ 1.67
LINC00963-205ENST00000444184 CPSF1Q10570 1443 aaKnown RBP25.46■■□□□ 1.67
LINC00963-205ENST00000444184 TBX22Q9Y458 520 aa25.46■■□□□ 1.67
LINC00963-205ENST00000444184 DIP2AQ14689 1571 aa25.45■■□□□ 1.67
LINC00963-205ENST00000444184 WWC1Q8IX03 1113 aa25.45■■□□□ 1.67
LINC00963-205ENST00000444184 SPINK5Q9NQ38 1064 aaPredicted RBP25.45■■□□□ 1.67
LINC00963-205ENST00000444184 EXOC6Q8TAG9 804 aa25.45■■□□□ 1.66
LINC00963-205ENST00000444184 KIF20BQ96Q89 1820 aa25.44■■□□□ 1.66
LINC00963-205ENST00000444184 PLIN1O60240 522 aa25.43■■□□□ 1.66
LINC00963-205ENST00000444184 EDC4Q6P2E9 1401 aaKnown RBP25.43■■□□□ 1.66
LINC00963-205ENST00000444184 NEUROD2Q15784 382 aa25.43■■□□□ 1.66
LINC00963-205ENST00000444184 NCKAP5LQ9HCH0 1330 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms