RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 PDE3BQ13370 1112 aa19.44■□□□□ 0.7
CHFR-204ENST00000443047 MLH3Q9UHC1 1453 aa19.43■□□□□ 0.7
CHFR-204ENST00000443047 HECW2Q9P2P5 1572 aa19.43■□□□□ 0.7
CHFR-204ENST00000443047 SLC12A5Q9H2X9 1139 aa19.42■□□□□ 0.7
CHFR-204ENST00000443047 YEATS2Q9ULM3 1422 aa19.42■□□□□ 0.7
CHFR-204ENST00000443047 MYOM1P52179 1685 aa19.42■□□□□ 0.7
CHFR-204ENST00000443047 MYOM2P54296 1465 aa19.42■□□□□ 0.7
CHFR-204ENST00000443047 CENPJQ9HC77 1338 aaPredicted RBP19.42■□□□□ 0.7
CHFR-204ENST00000443047 BLMP54132 1417 aaPredicted RBP19.41■□□□□ 0.7
CHFR-204ENST00000443047 KDM2BQ8NHM5 1336 aa19.4■□□□□ 0.7
CHFR-204ENST00000443047 ASXL1Q8IXJ9 1541 aa19.4■□□□□ 0.7
CHFR-204ENST00000443047 PLEKHH1Q9ULM0 1364 aa19.4■□□□□ 0.7
CHFR-204ENST00000443047 SYNMO15061 1565 aa19.4■□□□□ 0.7
CHFR-204ENST00000443047 LMTK2Q8IWU2 1503 aa19.4■□□□□ 0.7
CHFR-204ENST00000443047 IDI1Q13907 227 aa19.39■□□□□ 0.69
CHFR-204ENST00000443047 ABCC3O15438 1527 aa19.38■□□□□ 0.69
CHFR-204ENST00000443047 ADGRB3O60242 1522 aa19.38■□□□□ 0.69
CHFR-204ENST00000443047 C14orf93Q9H972 538 aaKnown RBP19.38■□□□□ 0.69
CHFR-204ENST00000443047 STK26Q9P289 416 aa19.38■□□□□ 0.69
CHFR-204ENST00000443047 BECN1Q14457 450 aa19.38■□□□□ 0.69
CHFR-204ENST00000443047 SEC24BO95487 1268 aa19.37■□□□□ 0.69
CHFR-204ENST00000443047 KDM5AP29375 1690 aaKnown RBP19.37■□□□□ 0.69
CHFR-204ENST00000443047 IFT172Q9UG01 1749 aa19.37■□□□□ 0.69
CHFR-204ENST00000443047 FAM69CQ0P6D2 419 aa19.36■□□□□ 0.69
CHFR-204ENST00000443047 FBXO31Q5XUX0 539 aaPredicted RBP19.36■□□□□ 0.69
CHFR-204ENST00000443047 SIGLEC1Q9BZZ2 1709 aa19.36■□□□□ 0.69
CHFR-204ENST00000443047 KIAA1210Q9ULL0 1709 aa19.35■□□□□ 0.69
CHFR-204ENST00000443047 PIK3C2GO75747 1445 aa19.35■□□□□ 0.69
CHFR-204ENST00000443047 APAF1O14727 1248 aa19.35■□□□□ 0.69
CHFR-204ENST00000443047 NRXN1Q9ULB1 1477 aa19.35■□□□□ 0.69
CHFR-204ENST00000443047 CFAP74Q9C0B2 1584 aa19.35■□□□□ 0.69
CHFR-204ENST00000443047 SPINK5Q9NQ38 1064 aaPredicted RBP19.33■□□□□ 0.68
CHFR-204ENST00000443047 DIP2CQ9Y2E4 1556 aa19.33■□□□□ 0.68
CHFR-204ENST00000443047 NEO1Q92859 1461 aa19.32■□□□□ 0.68
CHFR-204ENST00000443047 MYH16Q9H6N6 1097 aa19.32■□□□□ 0.68
CHFR-204ENST00000443047 CABP2Q9NPB3 220 aa19.32■□□□□ 0.68
CHFR-204ENST00000443047 ESPNB1AK53 854 aa19.31■□□□□ 0.68
CHFR-204ENST00000443047 MLECQ14165 292 aa19.31■□□□□ 0.68
CHFR-204ENST00000443047 NEURL4Q96JN8 1562 aa19.31■□□□□ 0.68
CHFR-204ENST00000443047 NSD3Q9BZ95 1437 aa19.31■□□□□ 0.68
CHFR-204ENST00000443047 ZMYM4Q5VZL5 1548 aa19.31■□□□□ 0.68
CHFR-204ENST00000443047 DMRT2Q9Y5R5 561 aa19.3■□□□□ 0.68
CHFR-204ENST00000443047 PPLO60437 1756 aa19.3■□□□□ 0.68
CHFR-204ENST00000443047 CAMSAP1Q5T5Y3 1602 aa19.3■□□□□ 0.68
CHFR-204ENST00000443047 NEUROD2Q15784 382 aa19.29■□□□□ 0.68
CHFR-204ENST00000443047 DUSP27Q5VZP5 1158 aa19.29■□□□□ 0.68
CHFR-204ENST00000443047 MORC1Q86VD1 984 aa19.29■□□□□ 0.68
CHFR-204ENST00000443047 TRIM44Q96DX7 344 aaPredicted RBP19.29■□□□□ 0.68
CHFR-204ENST00000443047 USP19O94966 1318 aa19.28■□□□□ 0.68
CHFR-204ENST00000443047 ADGRB1O14514 1584 aa19.28■□□□□ 0.68
CHFR-204ENST00000443047 VGFO15240 615 aaPredicted RBP19.28■□□□□ 0.68
CHFR-204ENST00000443047 RBM10P98175 930 aaKnown RBP19.27■□□□□ 0.68
CHFR-204ENST00000443047 GOLGA2Q08379 1002 aa19.27■□□□□ 0.68
CHFR-204ENST00000443047 ERBB4Q15303 1308 aa19.27■□□□□ 0.68
CHFR-204ENST00000443047 ARID3AQ99856 593 aa19.27■□□□□ 0.68
CHFR-204ENST00000443047 RRP7AQ9Y3A4 280 aaKnown RBP19.27■□□□□ 0.68
CHFR-204ENST00000443047 FSD2A1L4K1 749 aa19.26■□□□□ 0.67
CHFR-204ENST00000443047 RPGRIP1LQ68CZ1 1315 aa19.25■□□□□ 0.67
CHFR-204ENST00000443047 NPC1L1Q9UHC9 1359 aa19.25■□□□□ 0.67
CHFR-204ENST00000443047 RICTORQ6R327 1708 aa19.25■□□□□ 0.67
CHFR-204ENST00000443047 TSPOAP1O95153 1857 aa19.25■□□□□ 0.67
CHFR-204ENST00000443047 ZNF521Q96K83 1311 aa19.25■□□□□ 0.67
CHFR-204ENST00000443047 TRAK2O60296 914 aa19.24■□□□□ 0.67
CHFR-204ENST00000443047 MCM4P33991 863 aa19.24■□□□□ 0.67
CHFR-204ENST00000443047 PDCL3Q9H2J4 239 aa19.24■□□□□ 0.67
CHFR-204ENST00000443047 QRICH2Q9H0J4 1663 aa19.24■□□□□ 0.67
CHFR-204ENST00000443047 ANTXR1Q9H6X2 564 aa19.23■□□□□ 0.67
CHFR-204ENST00000443047 MINK1Q8N4C8 1332 aaPredicted RBP19.23■□□□□ 0.67
CHFR-204ENST00000443047 SBNO2Q9Y2G9 1366 aa19.23■□□□□ 0.67
CHFR-204ENST00000443047 MRE11P49959 708 aa19.23■□□□□ 0.67
CHFR-204ENST00000443047 SLC24A1O60721 1099 aa19.22■□□□□ 0.67
CHFR-204ENST00000443047 IGHDP01880 384 aa19.22■□□□□ 0.67
CHFR-204ENST00000443047 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.22■□□□□ 0.67
CHFR-204ENST00000443047 NEXMIFQ5QGS0 1516 aa19.22■□□□□ 0.67
CHFR-204ENST00000443047 INSRP06213 1382 aa19.22■□□□□ 0.67
CHFR-204ENST00000443047 SLFN5Q08AF3 891 aa19.22■□□□□ 0.67
CHFR-204ENST00000443047 GRPEL1Q9HAV7 217 aa19.22■□□□□ 0.67
CHFR-204ENST00000443047 STAG3Q9UJ98 1225 aa19.22■□□□□ 0.67
CHFR-204ENST00000443047 SETBP1Q9Y6X0 1596 aa19.22■□□□□ 0.67
CHFR-204ENST00000443047 SRPK2P78362 688 aaKnown RBP19.21■□□□□ 0.67
CHFR-204ENST00000443047 TBC1D2Q9BYX2 928 aa19.21■□□□□ 0.67
CHFR-204ENST00000443047 MTHFSP49914 203 aa19.21■□□□□ 0.67
CHFR-204ENST00000443047 MYO3AQ8NEV4 1616 aa19.21■□□□□ 0.67
CHFR-204ENST00000443047 GLI2P10070 1586 aa19.21■□□□□ 0.67
CHFR-204ENST00000443047 KIAA1211Q6ZU35 1233 aa19.2■□□□□ 0.66
CHFR-204ENST00000443047 UPF2Q9HAU5 1272 aaKnown RBP19.2■□□□□ 0.66
CHFR-204ENST00000443047 MYO5BQ9ULV0 1848 aa19.2■□□□□ 0.66
CHFR-204ENST00000443047 BCAR3O75815 825 aa19.2■□□□□ 0.66
CHFR-204ENST00000443047 EVC2Q86UK5 1308 aa19.19■□□□□ 0.66
CHFR-204ENST00000443047 PRAM1Q96QH2 718 aa19.19■□□□□ 0.66
CHFR-204ENST00000443047 SLC52A1Q9NWF4 448 aa19.18■□□□□ 0.66
CHFR-204ENST00000443047 PIK3C2BO00750 1634 aa19.18■□□□□ 0.66
CHFR-204ENST00000443047 TULP4Q9NRJ4 1543 aa19.17■□□□□ 0.66
CHFR-204ENST00000443047 TPM2P07951 284 aa19.17■□□□□ 0.66
CHFR-204ENST00000443047 GGNBP2Q9H3C7 697 aa19.17■□□□□ 0.66
CHFR-204ENST00000443047 FAM13BQ9NYF5 915 aa19.17■□□□□ 0.66
CHFR-204ENST00000443047 RIMBP3CA6NJZ7 1639 aa19.15■□□□□ 0.66
CHFR-204ENST00000443047 RIMBP3BA6NNM3 1639 aa19.15■□□□□ 0.66
CHFR-204ENST00000443047 RIMBP3Q9UFD9 1639 aa19.15■□□□□ 0.66
CHFR-204ENST00000443047 ZC3H13Q5T200 1668 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms