RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 VPS72Q15906 364 aa12.28□□□□□ -0.44
SSXP3-201ENST00000442971 CEP152O94986 1710 aa12.27□□□□□ -0.45
SSXP3-201ENST00000442971 MBD5Q9P267 1494 aa12.27□□□□□ -0.45
SSXP3-201ENST00000442971 PLEKHG1Q9ULL1 1385 aa12.27□□□□□ -0.45
SSXP3-201ENST00000442971 APLP1P51693 650 aa12.26□□□□□ -0.45
SSXP3-201ENST00000442971 IDI1Q13907 227 aa12.26□□□□□ -0.45
SSXP3-201ENST00000442971 CCDC9Q9Y3X0 531 aaKnown RBP12.26□□□□□ -0.45
SSXP3-201ENST00000442971 APBA3O96018 575 aa12.25□□□□□ -0.45
SSXP3-201ENST00000442971 ADGRB3O60242 1522 aa12.24□□□□□ -0.45
SSXP3-201ENST00000442971 DLC1Q96QB1 1528 aa12.24□□□□□ -0.45
SSXP3-201ENST00000442971 GPR162Q16538 588 aa12.24□□□□□ -0.45
SSXP3-201ENST00000442971 ZNF644Q9H582 1327 aaPredicted RBP12.23□□□□□ -0.45
SSXP3-201ENST00000442971 PTGER2P43116 358 aa12.23□□□□□ -0.45
SSXP3-201ENST00000442971 ARHGAP31Q2M1Z3 1444 aa12.23□□□□□ -0.45
SSXP3-201ENST00000442971 TRIM37O94972 964 aa12.22□□□□□ -0.45
SSXP3-201ENST00000442971 AMOTL2Q9Y2J4 779 aa12.22□□□□□ -0.45
SSXP3-201ENST00000442971 AATKQ6ZMQ8 1374 aa12.22□□□□□ -0.45
SSXP3-201ENST00000442971 PIK3R4Q99570 1358 aa12.22□□□□□ -0.45
SSXP3-201ENST00000442971 GPBP1L1Q9HC44 474 aaPredicted RBP12.21□□□□□ -0.45
SSXP3-201ENST00000442971 RPRD2Q5VT52 1461 aaKnown RBP12.21□□□□□ -0.45
SSXP3-201ENST00000442971 TRPM2O94759 1503 aa12.2□□□□□ -0.46
SSXP3-201ENST00000442971 CASZ1Q86V15 1759 aa12.19□□□□□ -0.46
SSXP3-201ENST00000442971 ZBTB7AO95365 584 aa12.19□□□□□ -0.46
SSXP3-201ENST00000442971 FAM98CQ17RN3 349 aaKnown RBP12.19□□□□□ -0.46
SSXP3-201ENST00000442971 TMEM131LA2VDJ0 1609 aa12.19□□□□□ -0.46
SSXP3-201ENST00000442971 C1orf167Q5SNV9 1468 aa12.19□□□□□ -0.46
SSXP3-201ENST00000442971 CCDC18Q5T9S5 1454 aa12.19□□□□□ -0.46
SSXP3-201ENST00000442971 ADGRL3Q9HAR2 1447 aa12.18□□□□□ -0.46
SSXP3-201ENST00000442971 ATP10DQ9P241 1426 aa12.18□□□□□ -0.46
SSXP3-201ENST00000442971 KCNA4P22459 653 aa12.18□□□□□ -0.46
SSXP3-201ENST00000442971 JMYQ8N9B5 988 aa12.18□□□□□ -0.46
SSXP3-201ENST00000442971 MTUS2Q5JR59 1369 aa12.18□□□□□ -0.46
SSXP3-201ENST00000442971 CCNB3Q8WWL7 1395 aa12.18□□□□□ -0.46
SSXP3-201ENST00000442971 ZFYVE9O95405 1425 aa12.17□□□□□ -0.46
SSXP3-201ENST00000442971 TNS2Q63HR2 1409 aa12.17□□□□□ -0.46
SSXP3-201ENST00000442971 ADAMTS13Q76LX8 1427 aa12.17□□□□□ -0.46
SSXP3-201ENST00000442971 CSRNP3Q8WYN3 585 aa12.17□□□□□ -0.46
SSXP3-201ENST00000442971 ORAI2Q96SN7 254 aa12.17□□□□□ -0.46
SSXP3-201ENST00000442971 ATF5Q9Y2D1 282 aaPredicted RBP12.17□□□□□ -0.46
SSXP3-201ENST00000442971 GOLGB1Q14789 3259 aaKnown RBP12.17□□□□□ -0.46
SSXP3-201ENST00000442971 EHBP1L1Q8N3D4 1523 aa12.16□□□□□ -0.46
SSXP3-201ENST00000442971 HDGFP51858 240 aaKnown RBP12.16□□□□□ -0.46
SSXP3-201ENST00000442971 FAM161AQ3B820 660 aa12.16□□□□□ -0.46
SSXP3-201ENST00000442971 PDGFDQ9GZP0 370 aaPredicted RBP12.16□□□□□ -0.46
SSXP3-201ENST00000442971 PCNTO95613 3336 aa12.16□□□□□ -0.46
SSXP3-201ENST00000442971 NOS1P29475 1434 aa12.16□□□□□ -0.46
SSXP3-201ENST00000442971 PTPRUQ92729 1446 aa12.16□□□□□ -0.46
SSXP3-201ENST00000442971 FAM196AQ6ZSG2 479 aa12.14□□□□□ -0.47
SSXP3-201ENST00000442971 CCDC141Q6ZP82 1450 aa12.14□□□□□ -0.47
SSXP3-201ENST00000442971 KLRG1Q96E93 195 aa12.13□□□□□ -0.47
SSXP3-201ENST00000442971 NWD2Q9ULI1 1742 aa12.13□□□□□ -0.47
SSXP3-201ENST00000442971 RIMS2Q9UQ26 1411 aa12.13□□□□□ -0.47
SSXP3-201ENST00000442971 EIF2AK4Q9P2K8 1649 aaKnown RBP12.13□□□□□ -0.47
SSXP3-201ENST00000442971 PLCH1Q4KWH8 1693 aa12.12□□□□□ -0.47
SSXP3-201ENST00000442971 PELP1Q8IZL8 1130 aaKnown RBP12.11□□□□□ -0.47
SSXP3-201ENST00000442971 USP32Q8NFA0 1604 aa12.11□□□□□ -0.47
SSXP3-201ENST00000442971 PTPN23Q9H3S7 1636 aa12.11□□□□□ -0.47
SSXP3-201ENST00000442971 MAP3K5Q99683 1374 aa12.11□□□□□ -0.47
SSXP3-201ENST00000442971 ZNF526Q8TF50 670 aaPredicted RBP12.11□□□□□ -0.47
SSXP3-201ENST00000442971 RNF39Q9H2S5 420 aa12.11□□□□□ -0.47
SSXP3-201ENST00000442971 NALCNQ8IZF0 1738 aa12.09□□□□□ -0.47
SSXP3-201ENST00000442971 RSPH4AQ5TD94 716 aa12.09□□□□□ -0.47
SSXP3-201ENST00000442971 ARXQ96QS3 562 aa12.09□□□□□ -0.47
SSXP3-201ENST00000442971 SGIP1Q9BQI5 828 aa12.09□□□□□ -0.47
SSXP3-201ENST00000442971 PXDNQ92626 1479 aa12.09□□□□□ -0.47
SSXP3-201ENST00000442971 XRN1Q8IZH2 1706 aaKnown RBP12.08□□□□□ -0.48
SSXP3-201ENST00000442971 NPHP3Q7Z494 1330 aa12.08□□□□□ -0.48
SSXP3-201ENST00000442971 MYO5BQ9ULV0 1848 aa12.08□□□□□ -0.48
SSXP3-201ENST00000442971 WDR90Q96KV7 1748 aa12.08□□□□□ -0.48
SSXP3-201ENST00000442971 ANO8Q9HCE9 1232 aaPredicted RBP12.08□□□□□ -0.48
SSXP3-201ENST00000442971 CROCC2H7BZ55 1655 aa12.07□□□□□ -0.48
SSXP3-201ENST00000442971 FYCO1Q9BQS8 1478 aa12.07□□□□□ -0.48
SSXP3-201ENST00000442971 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.07□□□□□ -0.48
SSXP3-201ENST00000442971 SLC52A1Q9NWF4 448 aa12.07□□□□□ -0.48
SSXP3-201ENST00000442971 ADGRL2O95490 1459 aa12.06□□□□□ -0.48
SSXP3-201ENST00000442971 NEXMIFQ5QGS0 1516 aa12.06□□□□□ -0.48
SSXP3-201ENST00000442971 KIF3CO14782 793 aa12.06□□□□□ -0.48
SSXP3-201ENST00000442971 XPCQ01831 940 aaPredicted RBP12.06□□□□□ -0.48
SSXP3-201ENST00000442971 ABCC5O15440 1437 aa12.05□□□□□ -0.48
SSXP3-201ENST00000442971 THSD7AQ9UPZ6 1657 aa12.05□□□□□ -0.48
SSXP3-201ENST00000442971 TSPY4P0CV99 314 aa12.05□□□□□ -0.48
SSXP3-201ENST00000442971 TSPY10P0CW01 314 aa12.05□□□□□ -0.48
SSXP3-201ENST00000442971 MTFR1LQ9H019 292 aa12.05□□□□□ -0.48
SSXP3-201ENST00000442971 GRIN3BO60391 1043 aa12.04□□□□□ -0.48
SSXP3-201ENST00000442971 HAP1P54257 671 aaPredicted RBP12.04□□□□□ -0.48
SSXP3-201ENST00000442971 HTRA3P83110 453 aa12.03□□□□□ -0.48
SSXP3-201ENST00000442971 CASKIN1Q8WXD9 1431 aa12.03□□□□□ -0.48
SSXP3-201ENST00000442971 ADCY9O60503 1353 aa12.02□□□□□ -0.49
SSXP3-201ENST00000442971 FOXO3O43524 673 aa12.02□□□□□ -0.49
SSXP3-201ENST00000442971 HSPA1AP0DMV8 641 aaKnown RBP12.02□□□□□ -0.49
SSXP3-201ENST00000442971 HSPA1BP0DMV9 641 aaKnown RBP12.02□□□□□ -0.49
SSXP3-201ENST00000442971 CACNB1Q02641 598 aaPredicted RBP12.02□□□□□ -0.49
SSXP3-201ENST00000442971 MLLT1Q03111 559 aaPredicted RBP12.01□□□□□ -0.49
SSXP3-201ENST00000442971 NRAPQ86VF7 1730 aa12.01□□□□□ -0.49
SSXP3-201ENST00000442971 C1QBPQ07021 282 aaKnown RBP12□□□□□ -0.49
SSXP3-201ENST00000442971 GCC2Q8IWJ2 1684 aa12□□□□□ -0.49
SSXP3-201ENST00000442971 SPATA31A5Q5VU36 1347 aa11.99□□□□□ -0.49
SSXP3-201ENST00000442971 SPATA31A7Q8IWB4 1347 aa11.99□□□□□ -0.49
SSXP3-201ENST00000442971 CHGAP10645 457 aaKnown RBP11.99□□□□□ -0.49
SSXP3-201ENST00000442971 ESCO1Q5FWF5 840 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms