RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 RUNDC1Q96C34 613 aa21.33■■□□□ 1.01
SEMA3B-207ENST00000441915 QRICH2Q9H0J4 1663 aa21.33■■□□□ 1.01
SEMA3B-207ENST00000441915 RPGRIP1LQ68CZ1 1315 aa21.33■■□□□ 1
SEMA3B-207ENST00000441915 CFAP65Q6ZU64 1925 aaKnown RBP21.33■■□□□ 1
SEMA3B-207ENST00000441915 NPM1P06748 294 aaKnown RBP eCLIP21.32■■□□□ 1
SEMA3B-207ENST00000441915 TMEM132EQ6IEE7 984 aa21.32■■□□□ 1
SEMA3B-207ENST00000441915 ADGRB1O14514 1584 aa21.31■■□□□ 1
SEMA3B-207ENST00000441915 NEUROD2Q15784 382 aa21.31■■□□□ 1
SEMA3B-207ENST00000441915 ZC3H13Q5T200 1668 aaKnown RBP21.31■■□□□ 1
SEMA3B-207ENST00000441915 SHPRHQ149N8 1683 aa21.31■■□□□ 1
SEMA3B-207ENST00000441915 CLUAP1Q96AJ1 413 aa21.29■■□□□ 1
SEMA3B-207ENST00000441915 POGZQ7Z3K3 1410 aa21.29■■□□□ 1
SEMA3B-207ENST00000441915 MLH3Q9UHC1 1453 aa21.29■■□□□ 1
SEMA3B-207ENST00000441915 IGHDP01880 384 aa21.28■■□□□ 1
SEMA3B-207ENST00000441915 TCP11L2Q8N4U5 519 aa21.28■■□□□ 1
SEMA3B-207ENST00000441915 CFAP53Q96M91 514 aa21.28■■□□□ 1
SEMA3B-207ENST00000441915 SLC4A3P48751 1232 aa21.28■■□□□ 1
SEMA3B-207ENST00000441915 COG6Q9Y2V7 657 aa21.28■■□□□ 1
SEMA3B-207ENST00000441915 RRP7AQ9Y3A4 280 aaKnown RBP21.28■■□□□ 1
SEMA3B-207ENST00000441915 FRMPD1Q5SYB0 1578 aa21.27■■□□□ 1
SEMA3B-207ENST00000441915 CFAP74Q9C0B2 1584 aa21.27■■□□□ 1
SEMA3B-207ENST00000441915 CD109Q6YHK3 1445 aa21.27■■□□□ 1
SEMA3B-207ENST00000441915 MTHFSP49914 203 aa21.27■■□□□ 1
SEMA3B-207ENST00000441915 PANK1Q8TE04 598 aa21.27■□□□□ 0.99
SEMA3B-207ENST00000441915 USP32Q8NFA0 1604 aa21.26■□□□□ 0.99
SEMA3B-207ENST00000441915 WDR63Q8IWG1 891 aa21.26■□□□□ 0.99
SEMA3B-207ENST00000441915 FRAT1Q92837 279 aaPredicted RBP21.26■□□□□ 0.99
SEMA3B-207ENST00000441915 PUS7Q96PZ0 661 aaKnown RBP21.26■□□□□ 0.99
SEMA3B-207ENST00000441915 PHF23Q9BUL5 403 aaPredicted RBP21.25■□□□□ 0.99
SEMA3B-207ENST00000441915 EVC2Q86UK5 1308 aa21.25■□□□□ 0.99
SEMA3B-207ENST00000441915 HECW2Q9P2P5 1572 aa21.25■□□□□ 0.99
SEMA3B-207ENST00000441915 IQSEC2Q5JU85 1478 aa21.25■□□□□ 0.99
SEMA3B-207ENST00000441915 RARSP54136 660 aaKnown RBP21.24■□□□□ 0.99
SEMA3B-207ENST00000441915 MAPK8IP3Q9UPT6 1336 aa21.24■□□□□ 0.99
SEMA3B-207ENST00000441915 VGFO15240 615 aaPredicted RBP21.23■□□□□ 0.99
SEMA3B-207ENST00000441915 ABCC3O15438 1527 aa21.23■□□□□ 0.99
SEMA3B-207ENST00000441915 AAMPQ13685 434 aa21.23■□□□□ 0.99
SEMA3B-207ENST00000441915 CCDC27Q2M243 656 aa21.23■□□□□ 0.99
SEMA3B-207ENST00000441915 NFKBIBQ15653 356 aa21.22■□□□□ 0.99
SEMA3B-207ENST00000441915 ANKRD36BQ8N2N9 1353 aa21.22■□□□□ 0.99
SEMA3B-207ENST00000441915 GLI2P10070 1586 aa21.21■□□□□ 0.99
SEMA3B-207ENST00000441915 NSD2O96028 1365 aa21.21■□□□□ 0.99
SEMA3B-207ENST00000441915 PMFBP1Q8TBY8 1022 aa21.2■□□□□ 0.98
SEMA3B-207ENST00000441915 NCBP3Q53F19 620 aaKnown RBP21.19■□□□□ 0.98
SEMA3B-207ENST00000441915 NUTM2DQ5VT03 806 aaPredicted RBP21.19■□□□□ 0.98
SEMA3B-207ENST00000441915 CAMSAP1Q5T5Y3 1602 aa21.18■□□□□ 0.98
SEMA3B-207ENST00000441915 MYH16Q9H6N6 1097 aa21.18■□□□□ 0.98
SEMA3B-207ENST00000441915 VIRMAQ69YN4 1812 aaKnown RBP21.18■□□□□ 0.98
SEMA3B-207ENST00000441915 U2AF1L5P0DN76 240 aaPredicted RBP21.17■□□□□ 0.98
SEMA3B-207ENST00000441915 U2AF1Q01081 240 aaKnown RBP eCLIP21.17■□□□□ 0.98
SEMA3B-207ENST00000441915 TULP4Q9NRJ4 1543 aa21.17■□□□□ 0.98
SEMA3B-207ENST00000441915 ARHGEF28Q8N1W1 1705 aaKnown RBP21.17■□□□□ 0.98
SEMA3B-207ENST00000441915 IL27Q8NEV9 243 aa21.16■□□□□ 0.98
SEMA3B-207ENST00000441915 CABP2Q9NPB3 220 aa21.15■□□□□ 0.98
SEMA3B-207ENST00000441915 NEXMIFQ5QGS0 1516 aa21.15■□□□□ 0.98
SEMA3B-207ENST00000441915 PIK3C2BO00750 1634 aa21.15■□□□□ 0.98
SEMA3B-207ENST00000441915 BCL2L13Q9BXK5 485 aa21.15■□□□□ 0.98
SEMA3B-207ENST00000441915 SIGLEC1Q9BZZ2 1709 aa21.14■□□□□ 0.98
SEMA3B-207ENST00000441915 RLBP1P12271 317 aa21.13■□□□□ 0.97
SEMA3B-207ENST00000441915 GSE1Q14687 1217 aa21.13■□□□□ 0.97
SEMA3B-207ENST00000441915 RAPGEF3O95398 923 aa21.12■□□□□ 0.97
SEMA3B-207ENST00000441915 UBE2Q2Q8WVN8 375 aa21.12■□□□□ 0.97
SEMA3B-207ENST00000441915 PCDHB15Q9Y5E8 787 aa21.12■□□□□ 0.97
SEMA3B-207ENST00000441915 USP19O94966 1318 aa21.12■□□□□ 0.97
SEMA3B-207ENST00000441915 SAFB2Q14151 953 aaKnown RBP eCLIP21.12■□□□□ 0.97
SEMA3B-207ENST00000441915 TNNQ9UQP3 1299 aa21.11■□□□□ 0.97
SEMA3B-207ENST00000441915 IDI1Q13907 227 aa21.1■□□□□ 0.97
SEMA3B-207ENST00000441915 SRPK2P78362 688 aaKnown RBP21.1■□□□□ 0.97
SEMA3B-207ENST00000441915 RWDD1Q9H446 243 aaPredicted RBP21.1■□□□□ 0.97
SEMA3B-207ENST00000441915 ARHGAP31Q2M1Z3 1444 aa21.1■□□□□ 0.97
SEMA3B-207ENST00000441915 ABCC11Q96J66 1382 aa21.09■□□□□ 0.97
SEMA3B-207ENST00000441915 NEO1Q92859 1461 aa21.09■□□□□ 0.97
SEMA3B-207ENST00000441915 A0A1W2PP64 1363 aa21.09■□□□□ 0.97
SEMA3B-207ENST00000441915 ADGRB2O60241 1585 aa21.09■□□□□ 0.97
SEMA3B-207ENST00000441915 CT47B1P0C2W7 299 aaPredicted RBP21.09■□□□□ 0.97
SEMA3B-207ENST00000441915 SLC52A1Q9NWF4 448 aa21.09■□□□□ 0.97
SEMA3B-207ENST00000441915 SEC24BO95487 1268 aa21.08■□□□□ 0.97
SEMA3B-207ENST00000441915 ZMYM3Q14202 1370 aa21.08■□□□□ 0.97
SEMA3B-207ENST00000441915 ZFYVE9O95405 1425 aa21.08■□□□□ 0.96
SEMA3B-207ENST00000441915 OSCARQ8IYS5 282 aa21.08■□□□□ 0.96
SEMA3B-207ENST00000441915 ZKSCAN2Q63HK3 967 aa21.07■□□□□ 0.96
SEMA3B-207ENST00000441915 STK26Q9P289 416 aa21.07■□□□□ 0.96
SEMA3B-207ENST00000441915 MVPQ14764 893 aaKnown RBP21.07■□□□□ 0.96
SEMA3B-207ENST00000441915 U2SURPO15042 1029 aaKnown RBP21.06■□□□□ 0.96
SEMA3B-207ENST00000441915 BECN1Q14457 450 aa21.06■□□□□ 0.96
SEMA3B-207ENST00000441915 FTSJ3Q8IY81 847 aaKnown RBP21.06■□□□□ 0.96
SEMA3B-207ENST00000441915 RTN4Q9NQC3 1192 aaKnown RBP21.06■□□□□ 0.96
SEMA3B-207ENST00000441915 UPF2Q9HAU5 1272 aaKnown RBP21.06■□□□□ 0.96
SEMA3B-207ENST00000441915 PDZRN3Q9UPQ7 1066 aa21.06■□□□□ 0.96
SEMA3B-207ENST00000441915 DIP2CQ9Y2E4 1556 aa21.06■□□□□ 0.96
SEMA3B-207ENST00000441915 GGNBP2Q9H3C7 697 aa21.05■□□□□ 0.96
SEMA3B-207ENST00000441915 ATAD2Q6PL18 1390 aa21.04■□□□□ 0.96
SEMA3B-207ENST00000441915 FRAT2O75474 233 aaPredicted RBP21.04■□□□□ 0.96
SEMA3B-207ENST00000441915 DZIP1LQ8IYY4 767 aaKnown RBP21.04■□□□□ 0.96
SEMA3B-207ENST00000441915 TERF2IPQ9NYB0 399 aa21.04■□□□□ 0.96
SEMA3B-207ENST00000441915 TSR2Q969E8 191 aaKnown RBP21.04■□□□□ 0.96
SEMA3B-207ENST00000441915 TMPOP42166 694 aaKnown RBP21.03■□□□□ 0.96
SEMA3B-207ENST00000441915 PLEKHF1Q96S99 279 aa21.03■□□□□ 0.96
SEMA3B-207ENST00000441915 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.02■□□□□ 0.96
SEMA3B-207ENST00000441915 SMC4Q9NTJ3 1288 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms