RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 PER1O15534 1290 aaPredicted RBP27.7■■■□□ 2.02
VRK2-207ENST00000440705 PLEKHH1Q9ULM0 1364 aa27.68■■■□□ 2.02
VRK2-207ENST00000440705 PTPRUQ92729 1446 aa27.68■■■□□ 2.02
VRK2-207ENST00000440705 AMOTL2Q9Y2J4 779 aa27.67■■■□□ 2.02
VRK2-207ENST00000440705 NPHP4O75161 1426 aaPredicted RBP27.66■■■□□ 2.02
VRK2-207ENST00000440705 ROBO2Q9HCK4 1378 aa27.65■■■□□ 2.02
VRK2-207ENST00000440705 SRPK2P78362 688 aaKnown RBP27.65■■■□□ 2.02
VRK2-207ENST00000440705 KTN1Q86UP2 1357 aaKnown RBP27.64■■■□□ 2.02
VRK2-207ENST00000440705 CABP2Q9NPB3 220 aa27.64■■■□□ 2.02
VRK2-207ENST00000440705 ATAD2Q6PL18 1390 aa27.63■■■□□ 2.01
VRK2-207ENST00000440705 PTCH1Q13635 1447 aa27.62■■■□□ 2.01
VRK2-207ENST00000440705 CDK19Q9BWU1 502 aa27.62■■■□□ 2.01
VRK2-207ENST00000440705 NINLQ9Y2I6 1382 aa27.62■■■□□ 2.01
VRK2-207ENST00000440705 TMC1Q8TDI8 760 aa27.62■■■□□ 2.01
VRK2-207ENST00000440705 KNSTRNQ9Y448 316 aa27.62■■■□□ 2.01
VRK2-207ENST00000440705 NCKAP5LQ9HCH0 1330 aa27.61■■■□□ 2.01
VRK2-207ENST00000440705 XRN1Q8IZH2 1706 aaKnown RBP27.6■■■□□ 2.01
VRK2-207ENST00000440705 RALBP1Q15311 655 aa27.59■■■□□ 2.01
VRK2-207ENST00000440705 SLC12A5Q9H2X9 1139 aa27.59■■■□□ 2.01
VRK2-207ENST00000440705 WASLO00401 505 aaPredicted RBP27.57■■■□□ 2
VRK2-207ENST00000440705 CHD2O14647 1828 aaKnown RBP27.57■■■□□ 2
VRK2-207ENST00000440705 CNGB1Q14028 1251 aaPredicted RBP27.55■■■□□ 2
VRK2-207ENST00000440705 KCNA6P17658 529 aa27.54■■■□□ 2
VRK2-207ENST00000440705 ADGRB2O60241 1585 aa27.54■■■□□ 2
VRK2-207ENST00000440705 NPC1L1Q9UHC9 1359 aa27.53■■■□□ 2
VRK2-207ENST00000440705 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.52■■■□□ 2
VRK2-207ENST00000440705 ANKRD36BQ8N2N9 1353 aa27.52■■■□□ 2
VRK2-207ENST00000440705 PARD3Q8TEW0 1356 aa27.51■■□□□ 1.99
VRK2-207ENST00000440705 LMTK3Q96Q04 1460 aa27.51■■□□□ 1.99
VRK2-207ENST00000440705 AMER1Q5JTC6 1135 aaPredicted RBP27.51■■□□□ 1.99
VRK2-207ENST00000440705 CARD14Q9BXL6 1004 aa27.51■■□□□ 1.99
VRK2-207ENST00000440705 CC2D1BQ5T0F9 858 aaKnown RBP27.5■■□□□ 1.99
VRK2-207ENST00000440705 MYBBP1AQ9BQG0 1328 aaKnown RBP27.48■■□□□ 1.99
VRK2-207ENST00000440705 HSPA2P54652 639 aa27.48■■□□□ 1.99
VRK2-207ENST00000440705 TERF2IPQ9NYB0 399 aa27.48■■□□□ 1.99
VRK2-207ENST00000440705 YTHDC1Q96MU7 727 aaKnown RBP27.46■■□□□ 1.99
VRK2-207ENST00000440705 NSD3Q9BZ95 1437 aa27.45■■□□□ 1.99
VRK2-207ENST00000440705 NUDT16Q96DE0 195 aaKnown RBP27.45■■□□□ 1.98
VRK2-207ENST00000440705 MRS2Q9HD23 443 aa27.45■■□□□ 1.98
VRK2-207ENST00000440705 CABP1Q9NZU7 370 aa27.45■■□□□ 1.98
VRK2-207ENST00000440705 HDGFL2Q7Z4V5 671 aaPredicted RBP27.43■■□□□ 1.98
VRK2-207ENST00000440705 CCDC61Q9Y6R9 512 aa27.43■■□□□ 1.98
VRK2-207ENST00000440705 A0A1W2PP64 1363 aa27.42■■□□□ 1.98
VRK2-207ENST00000440705 USP32Q8NFA0 1604 aa27.42■■□□□ 1.98
VRK2-207ENST00000440705 ATP7BP35670 1465 aa27.42■■□□□ 1.98
VRK2-207ENST00000440705 NWD1Q149M9 1564 aa27.41■■□□□ 1.98
VRK2-207ENST00000440705 CCDC184Q52MB2 194 aa27.4■■□□□ 1.98
VRK2-207ENST00000440705 CGNL1Q0VF96 1302 aa27.4■■□□□ 1.98
VRK2-207ENST00000440705 PPIP5K1Q6PFW1 1433 aa27.4■■□□□ 1.98
VRK2-207ENST00000440705 CD163L1Q9NR16 1453 aa27.4■■□□□ 1.98
VRK2-207ENST00000440705 NLRP13Q86W25 1043 aa27.4■■□□□ 1.98
VRK2-207ENST00000440705 BRD4O60885 1362 aaPredicted RBP27.39■■□□□ 1.98
VRK2-207ENST00000440705 PRR36Q9H6K5 1346 aa27.37■■□□□ 1.97
VRK2-207ENST00000440705 NSD2O96028 1365 aa27.35■■□□□ 1.97
VRK2-207ENST00000440705 STRCQ7RTU9 1775 aa27.34■■□□□ 1.97
VRK2-207ENST00000440705 NKTRP30414 1462 aaKnown RBP27.33■■□□□ 1.97
VRK2-207ENST00000440705 CPSF1Q10570 1443 aaKnown RBP27.33■■□□□ 1.97
VRK2-207ENST00000440705 CDC42BPGQ6DT37 1551 aa27.32■■□□□ 1.96
VRK2-207ENST00000440705 TOPAZ1Q8N9V7 1692 aa27.32■■□□□ 1.96
VRK2-207ENST00000440705 ZNF692Q9BU19 519 aaPredicted RBP27.31■■□□□ 1.96
VRK2-207ENST00000440705 NALCNQ8IZF0 1738 aa27.31■■□□□ 1.96
VRK2-207ENST00000440705 PLEKHG3A1L390 1219 aa27.3■■□□□ 1.96
VRK2-207ENST00000440705 CENPBP07199 599 aaPredicted RBP27.3■■□□□ 1.96
VRK2-207ENST00000440705 ANKARQ7Z5J8 1434 aa27.3■■□□□ 1.96
VRK2-207ENST00000440705 PROSER2Q86WR7 435 aaPredicted RBP27.3■■□□□ 1.96
VRK2-207ENST00000440705 ADGRL3Q9HAR2 1447 aa27.3■■□□□ 1.96
VRK2-207ENST00000440705 PPP2R1AP30153 589 aa27.3■■□□□ 1.96
VRK2-207ENST00000440705 ITSN1Q15811 1721 aa27.29■■□□□ 1.96
VRK2-207ENST00000440705 NUTM2FA1L443 756 aa27.29■■□□□ 1.96
VRK2-207ENST00000440705 MORC1Q86VD1 984 aa27.29■■□□□ 1.96
VRK2-207ENST00000440705 FMN2Q9NZ56 1722 aa27.28■■□□□ 1.96
VRK2-207ENST00000440705 C14orf37Q86TY3 774 aa27.27■■□□□ 1.96
VRK2-207ENST00000440705 FAM9BQ8IZU0 186 aa27.27■■□□□ 1.96
VRK2-207ENST00000440705 EDC4Q6P2E9 1401 aaKnown RBP27.26■■□□□ 1.95
VRK2-207ENST00000440705 AKAP12Q02952 1782 aa27.26■■□□□ 1.95
VRK2-207ENST00000440705 RBM33Q96EV2 1170 aaKnown RBP27.26■■□□□ 1.95
VRK2-207ENST00000440705 PNISRQ8TF01 805 aaKnown RBP27.24■■□□□ 1.95
VRK2-207ENST00000440705 MON2Q7Z3U7 1717 aa27.24■■□□□ 1.95
VRK2-207ENST00000440705 FYB1O15117 783 aa27.24■■□□□ 1.95
VRK2-207ENST00000440705 RGPD8O14715 1765 aaPredicted RBP27.23■■□□□ 1.95
VRK2-207ENST00000440705 ACEP12821 1306 aa27.23■■□□□ 1.95
VRK2-207ENST00000440705 NCOA3Q9Y6Q9 1424 aa27.22■■□□□ 1.95
VRK2-207ENST00000440705 STRCP1A6NGW2 1772 aa27.22■■□□□ 1.95
VRK2-207ENST00000440705 KIF20BQ96Q89 1820 aa27.21■■□□□ 1.95
VRK2-207ENST00000440705 DMRT2Q9Y5R5 561 aa27.21■■□□□ 1.95
VRK2-207ENST00000440705 ANKRD26Q9UPS8 1709 aa27.2■■□□□ 1.95
VRK2-207ENST00000440705 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.19■■□□□ 1.94
VRK2-207ENST00000440705 GGNBP2Q9H3C7 697 aa27.19■■□□□ 1.94
VRK2-207ENST00000440705 C19orf44Q9H6X5 657 aa27.19■■□□□ 1.94
VRK2-207ENST00000440705 POLR3AO14802 1390 aaPredicted RBP27.18■■□□□ 1.94
VRK2-207ENST00000440705 NGDNQ8NEJ9 315 aaKnown RBP27.17■■□□□ 1.94
VRK2-207ENST00000440705 TMEM94Q12767 1356 aa27.16■■□□□ 1.94
VRK2-207ENST00000440705 PMFBP1Q8TBY8 1022 aa27.16■■□□□ 1.94
VRK2-207ENST00000440705 USP6P35125 1406 aa27.15■■□□□ 1.94
VRK2-207ENST00000440705 TNNT2P45379 298 aaPredicted RBP27.14■■□□□ 1.94
VRK2-207ENST00000440705 TTC21BQ7Z4L5 1316 aa27.12■■□□□ 1.93
VRK2-207ENST00000440705 NRKQ7Z2Y5 1582 aa27.12■■□□□ 1.93
VRK2-207ENST00000440705 HNRNPUQ00839 825 aaKnown RBP eCLIP27.11■■□□□ 1.93
VRK2-207ENST00000440705 PHF8Q9UPP1 1060 aa27.11■■□□□ 1.93
VRK2-207ENST00000440705 DCCP43146 1447 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms