RNA–Protein interactions for RNA: ENST00000438014.5

R3HDM1-208, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-208ENST00000438014 CHADLQ6NUI6 762 aa13.11□□□□□ -0.31
R3HDM1-208ENST00000438014 C19orf44Q9H6X5 657 aa13.11□□□□□ -0.31
R3HDM1-208ENST00000438014 SLC52A1Q9NWF4 448 aa13.11□□□□□ -0.31
R3HDM1-208ENST00000438014 ZRANB1Q9UGI0 708 aa13.11□□□□□ -0.31
R3HDM1-208ENST00000438014 MAST1Q9Y2H9 1570 aa13.11□□□□□ -0.31
R3HDM1-208ENST00000438014 AFF2P51816 1311 aa13.11□□□□□ -0.31
R3HDM1-208ENST00000438014 NUTM2DQ5VT03 806 aaPredicted RBP13.1□□□□□ -0.31
R3HDM1-208ENST00000438014 QTRT2Q9H974 415 aaKnown RBP13.1□□□□□ -0.31
R3HDM1-208ENST00000438014 COL16A1Q07092 1604 aaPredicted RBP13.1□□□□□ -0.31
R3HDM1-208ENST00000438014 MROH1Q8NDA8 1641 aa13.1□□□□□ -0.31
R3HDM1-208ENST00000438014 DUOX2Q9NRD8 1548 aa13.09□□□□□ -0.31
R3HDM1-208ENST00000438014 PPP1R15AO75807 674 aaPredicted RBP13.09□□□□□ -0.31
R3HDM1-208ENST00000438014 TSPYL2Q9H2G4 693 aaPredicted RBP13.09□□□□□ -0.31
R3HDM1-208ENST00000438014 TBX22Q9Y458 520 aa13.09□□□□□ -0.31
R3HDM1-208ENST00000438014 PIK3C2BO00750 1634 aa13.09□□□□□ -0.31
R3HDM1-208ENST00000438014 NWD1Q149M9 1564 aa13.08□□□□□ -0.32
R3HDM1-208ENST00000438014 ZNF467Q7Z7K2 595 aaPredicted RBP13.08□□□□□ -0.32
R3HDM1-208ENST00000438014 CEP152O94986 1710 aa13.08□□□□□ -0.32
R3HDM1-208ENST00000438014 NGLY1Q96IV0 654 aa13.07□□□□□ -0.32
R3HDM1-208ENST00000438014 RRP7BPQ9NSQ0 103 aa13.07□□□□□ -0.32
R3HDM1-208ENST00000438014 KIF15Q9NS87 1388 aa13.07□□□□□ -0.32
R3HDM1-208ENST00000438014 KDM5AP29375 1690 aaKnown RBP13.06□□□□□ -0.32
R3HDM1-208ENST00000438014 LRRC59Q96AG4 307 aaKnown RBP13.06□□□□□ -0.32
R3HDM1-208ENST00000438014 FARP1Q9Y4F1 1045 aaPredicted RBP13.06□□□□□ -0.32
R3HDM1-208ENST00000438014 PLEKHG1Q9ULL1 1385 aa13.06□□□□□ -0.32
R3HDM1-208ENST00000438014 MYOM3Q5VTT5 1437 aa13.05□□□□□ -0.32
R3HDM1-208ENST00000438014 ERBINQ96RT1 1412 aa13.05□□□□□ -0.32
R3HDM1-208ENST00000438014 BRINP3Q76B58 766 aa13.05□□□□□ -0.32
R3HDM1-208ENST00000438014 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.05□□□□□ -0.32
R3HDM1-208ENST00000438014 AHDC1Q5TGY3 1603 aaPredicted RBP13.04□□□□□ -0.32
R3HDM1-208ENST00000438014 IFFO2Q5TF58 517 aa13.04□□□□□ -0.32
R3HDM1-208ENST00000438014 C8orf37Q96NL8 207 aa13.04□□□□□ -0.32
R3HDM1-208ENST00000438014 ATAD2Q6PL18 1390 aa13.04□□□□□ -0.32
R3HDM1-208ENST00000438014 SHPRHQ149N8 1683 aa13.03□□□□□ -0.32
R3HDM1-208ENST00000438014 CCDC125Q86Z20 511 aa13.02□□□□□ -0.33
R3HDM1-208ENST00000438014 RGS12O14924 1447 aa13.02□□□□□ -0.33
R3HDM1-208ENST00000438014 NOS1P29475 1434 aa13.02□□□□□ -0.33
R3HDM1-208ENST00000438014 PDAP1Q13442 181 aaKnown RBP13.01□□□□□ -0.33
R3HDM1-208ENST00000438014 LMTK2Q8IWU2 1503 aa13□□□□□ -0.33
R3HDM1-208ENST00000438014 SETD5Q9C0A6 1442 aa13□□□□□ -0.33
R3HDM1-208ENST00000438014 RIMS2Q9UQ26 1411 aa13□□□□□ -0.33
R3HDM1-208ENST00000438014 PIK3R4Q99570 1358 aa13□□□□□ -0.33
R3HDM1-208ENST00000438014 ADGRB3O60242 1522 aa12.99□□□□□ -0.33
R3HDM1-208ENST00000438014 SRCAPQ6ZRS2 3230 aa12.99□□□□□ -0.33
R3HDM1-208ENST00000438014 ZFYVE9O95405 1425 aa12.98□□□□□ -0.33
R3HDM1-208ENST00000438014 CHD2O14647 1828 aaKnown RBP12.98□□□□□ -0.33
R3HDM1-208ENST00000438014 TRPC5Q9UL62 973 aaPredicted RBP12.98□□□□□ -0.33
R3HDM1-208ENST00000438014 AMOTL2Q9Y2J4 779 aa12.98□□□□□ -0.33
R3HDM1-208ENST00000438014 PRKAR2AP13861 404 aaKnown RBP12.97□□□□□ -0.33
R3HDM1-208ENST00000438014 PCDHB8Q9UN66 801 aa12.97□□□□□ -0.33
R3HDM1-208ENST00000438014 PCDHB13Q9Y5F0 798 aa12.97□□□□□ -0.33
R3HDM1-208ENST00000438014 DIP2AQ14689 1571 aa12.96□□□□□ -0.33
R3HDM1-208ENST00000438014 USP21Q9UK80 565 aa12.96□□□□□ -0.33
R3HDM1-208ENST00000438014 ABCC5O15440 1437 aa12.96□□□□□ -0.34
R3HDM1-208ENST00000438014 ANKRD30AQ9BXX3 1397 aa12.95□□□□□ -0.34
R3HDM1-208ENST00000438014 ADAMTS2O95450 1211 aa12.95□□□□□ -0.34
R3HDM1-208ENST00000438014 CCDC61Q9Y6R9 512 aa12.95□□□□□ -0.34
R3HDM1-208ENST00000438014 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.95□□□□□ -0.34
R3HDM1-208ENST00000438014 DCCP43146 1447 aa12.95□□□□□ -0.34
R3HDM1-208ENST00000438014 PNPLA6Q8IY17 1366 aa12.94□□□□□ -0.34
R3HDM1-208ENST00000438014 KANK4Q5T7N3 995 aaPredicted RBP12.93□□□□□ -0.34
R3HDM1-208ENST00000438014 ZNF579Q8NAF0 562 aaKnown RBP12.93□□□□□ -0.34
R3HDM1-208ENST00000438014 CHIC2Q9UKJ5 165 aa12.93□□□□□ -0.34
R3HDM1-208ENST00000438014 ADAMTS13Q76LX8 1427 aa12.93□□□□□ -0.34
R3HDM1-208ENST00000438014 RPRD2Q5VT52 1461 aaKnown RBP12.92□□□□□ -0.34
R3HDM1-208ENST00000438014 PSEN1P49768 467 aa12.92□□□□□ -0.34
R3HDM1-208ENST00000438014 ASXL1Q8IXJ9 1541 aa12.92□□□□□ -0.34
R3HDM1-208ENST00000438014 FNBP4Q8N3X1 1017 aaPredicted RBP12.91□□□□□ -0.34
R3HDM1-208ENST00000438014 SETBP1Q9Y6X0 1596 aa12.9□□□□□ -0.34
R3HDM1-208ENST00000438014 PAK3O75914 559 aaPredicted RBP12.9□□□□□ -0.34
R3HDM1-208ENST00000438014 DDX17Q92841 729 aaKnown RBP12.9□□□□□ -0.34
R3HDM1-208ENST00000438014 DAPK1P53355 1430 aa12.89□□□□□ -0.35
R3HDM1-208ENST00000438014 MST1RQ04912 1400 aa12.89□□□□□ -0.35
R3HDM1-208ENST00000438014 FXR2P51116 673 aaKnown RBP eCLIP12.89□□□□□ -0.35
R3HDM1-208ENST00000438014 WDR70Q9NW82 654 aa12.88□□□□□ -0.35
R3HDM1-208ENST00000438014 TRPM2O94759 1503 aa12.88□□□□□ -0.35
R3HDM1-208ENST00000438014 PTPRUQ92729 1446 aa12.88□□□□□ -0.35
R3HDM1-208ENST00000438014 SF3B2Q13435 895 aaKnown RBP12.86□□□□□ -0.35
R3HDM1-208ENST00000438014 ATRNO75882 1429 aa12.86□□□□□ -0.35
R3HDM1-208ENST00000438014 PTCH1Q13635 1447 aa12.86□□□□□ -0.35
R3HDM1-208ENST00000438014 TMEM131LA2VDJ0 1609 aa12.85□□□□□ -0.35
R3HDM1-208ENST00000438014 VPS8Q8N3P4 1428 aa12.85□□□□□ -0.35
R3HDM1-208ENST00000438014 SOS2Q07890 1332 aaPredicted RBP12.85□□□□□ -0.35
R3HDM1-208ENST00000438014 NHSL1Q5SYE7 1610 aa12.84□□□□□ -0.35
R3HDM1-208ENST00000438014 GJD4Q96KN9 370 aaPredicted RBP12.84□□□□□ -0.35
R3HDM1-208ENST00000438014 MFRPQ9BY79 579 aa12.84□□□□□ -0.35
R3HDM1-208ENST00000438014 BLMP54132 1417 aaPredicted RBP12.82□□□□□ -0.36
R3HDM1-208ENST00000438014 PTPN23Q9H3S7 1636 aa12.81□□□□□ -0.36
R3HDM1-208ENST00000438014 ADGRL3Q9HAR2 1447 aa12.81□□□□□ -0.36
R3HDM1-208ENST00000438014 ANKRD50Q9ULJ7 1429 aa12.81□□□□□ -0.36
R3HDM1-208ENST00000438014 CROCC2H7BZ55 1655 aa12.81□□□□□ -0.36
R3HDM1-208ENST00000438014 GCC2Q8IWJ2 1684 aa12.81□□□□□ -0.36
R3HDM1-208ENST00000438014 IFNL1Q8IU54 200 aa12.81□□□□□ -0.36
R3HDM1-208ENST00000438014 C1orf167Q5SNV9 1468 aa12.8□□□□□ -0.36
R3HDM1-208ENST00000438014 DEFB132Q7Z7B7 95 aa12.8□□□□□ -0.36
R3HDM1-208ENST00000438014 ORAI2Q96SN7 254 aa12.8□□□□□ -0.36
R3HDM1-208ENST00000438014 MYO5BQ9ULV0 1848 aa12.8□□□□□ -0.36
R3HDM1-208ENST00000438014 MAP3K13O43283 966 aa12.78□□□□□ -0.36
R3HDM1-208ENST00000438014 ZNF326Q5BKZ1 582 aaKnown RBP12.78□□□□□ -0.36
R3HDM1-208ENST00000438014 KCNV2Q8TDN2 545 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms