RNA–Protein interactions for RNA: ENST00000437615.1

LINC00242-201, long intergenic non-protein coding RNA 242, humanhuman

TSL 2 BASIC

Gene LINC00242, Length 2,418 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242-201ENST00000437615 ARHGEF28Q8N1W1 1705 aaKnown RBP16.55■□□□□ 0.24
LINC00242-201ENST00000437615 MORC1Q86VD1 984 aa16.55■□□□□ 0.24
LINC00242-201ENST00000437615 PTPRMP28827 1452 aa16.54■□□□□ 0.24
LINC00242-201ENST00000437615 TULP4Q9NRJ4 1543 aa16.54■□□□□ 0.24
LINC00242-201ENST00000437615 BLMP54132 1417 aaPredicted RBP16.53■□□□□ 0.24
LINC00242-201ENST00000437615 CEBPAP49715 358 aaPredicted RBP16.53■□□□□ 0.24
LINC00242-201ENST00000437615 PDE3BQ13370 1112 aa16.53■□□□□ 0.24
LINC00242-201ENST00000437615 ERICH6BQ5W0A0 696 aa16.53■□□□□ 0.24
LINC00242-201ENST00000437615 DNAJC5Q9H3Z4 198 aa16.53■□□□□ 0.24
LINC00242-201ENST00000437615 CGNL1Q0VF96 1302 aa16.52■□□□□ 0.23
LINC00242-201ENST00000437615 TNNT2P45379 298 aaPredicted RBP16.51■□□□□ 0.23
LINC00242-201ENST00000437615 WAPLQ7Z5K2 1190 aa16.51■□□□□ 0.23
LINC00242-201ENST00000437615 ANKRD36BQ8N2N9 1353 aa16.51■□□□□ 0.23
LINC00242-201ENST00000437615 CDK19Q9BWU1 502 aa16.51■□□□□ 0.23
LINC00242-201ENST00000437615 PLPPR3Q6T4P5 718 aa16.49■□□□□ 0.23
LINC00242-201ENST00000437615 CDCA7LQ96GN5 454 aa16.49■□□□□ 0.23
LINC00242-201ENST00000437615 ATAD2Q6PL18 1390 aa16.48■□□□□ 0.23
LINC00242-201ENST00000437615 ABCC11Q96J66 1382 aa16.48■□□□□ 0.23
LINC00242-201ENST00000437615 TMEM2Q9UHN6 1383 aa16.47■□□□□ 0.23
LINC00242-201ENST00000437615 NINLQ9Y2I6 1382 aa16.47■□□□□ 0.23
LINC00242-201ENST00000437615 METP08581 1390 aa16.47■□□□□ 0.23
LINC00242-201ENST00000437615 TERF2IPQ9NYB0 399 aa16.47■□□□□ 0.23
LINC00242-201ENST00000437615 RNF123Q5XPI4 1314 aa16.46■□□□□ 0.23
LINC00242-201ENST00000437615 PPP4R2Q9NY27 417 aa16.46■□□□□ 0.23
LINC00242-201ENST00000437615 TXNDC2Q86VQ3 553 aa16.46■□□□□ 0.23
LINC00242-201ENST00000437615 PLEKHH1Q9ULM0 1364 aa16.45■□□□□ 0.22
LINC00242-201ENST00000437615 CCDC146Q8IYE0 955 aa16.45■□□□□ 0.22
LINC00242-201ENST00000437615 CABP1Q9NZU7 370 aa16.45■□□□□ 0.22
LINC00242-201ENST00000437615 A0A1W2PP64 1363 aa16.45■□□□□ 0.22
LINC00242-201ENST00000437615 POLR3AO14802 1390 aaPredicted RBP16.45■□□□□ 0.22
LINC00242-201ENST00000437615 MTHFSP49914 203 aa16.44■□□□□ 0.22
LINC00242-201ENST00000437615 LTKP29376 864 aa16.43■□□□□ 0.22
LINC00242-201ENST00000437615 HDGFL2Q7Z4V5 671 aaPredicted RBP16.43■□□□□ 0.22
LINC00242-201ENST00000437615 RCAN3Q9UKA8 241 aa16.43■□□□□ 0.22
LINC00242-201ENST00000437615 DLC1Q96QB1 1528 aa16.43■□□□□ 0.22
LINC00242-201ENST00000437615 NSD2O96028 1365 aa16.43■□□□□ 0.22
LINC00242-201ENST00000437615 APAF1O14727 1248 aa16.41■□□□□ 0.22
LINC00242-201ENST00000437615 SIRT1Q96EB6 747 aa16.41■□□□□ 0.22
LINC00242-201ENST00000437615 GGNBP2Q9H3C7 697 aa16.41■□□□□ 0.22
LINC00242-201ENST00000437615 NLRP1Q9C000 1473 aa16.41■□□□□ 0.22
LINC00242-201ENST00000437615 FYB1O15117 783 aa16.4■□□□□ 0.22
LINC00242-201ENST00000437615 TSHZ2Q9NRE2 1034 aa16.4■□□□□ 0.22
LINC00242-201ENST00000437615 EID1Q9Y6B2 187 aa16.4■□□□□ 0.22
LINC00242-201ENST00000437615 WASLO00401 505 aaPredicted RBP16.4■□□□□ 0.22
LINC00242-201ENST00000437615 CFAP53Q96M91 514 aa16.4■□□□□ 0.22
LINC00242-201ENST00000437615 NRXN3Q9Y4C0 1643 aa16.4■□□□□ 0.22
LINC00242-201ENST00000437615 USP32Q8NFA0 1604 aa16.39■□□□□ 0.21
LINC00242-201ENST00000437615 SETD1AO15047 1707 aaKnown RBP16.38■□□□□ 0.21
LINC00242-201ENST00000437615 GOLGA2Q08379 1002 aa16.38■□□□□ 0.21
LINC00242-201ENST00000437615 UBR1Q8IWV7 1749 aa16.38■□□□□ 0.21
LINC00242-201ENST00000437615 CD163L1Q9NR16 1453 aa16.38■□□□□ 0.21
LINC00242-201ENST00000437615 B4GALNT3Q6L9W6 998 aa16.38■□□□□ 0.21
LINC00242-201ENST00000437615 ZNF521Q96K83 1311 aa16.38■□□□□ 0.21
LINC00242-201ENST00000437615 RRP1P56182 461 aaKnown RBP16.37■□□□□ 0.21
LINC00242-201ENST00000437615 THEMISQ8N1K5 641 aaPredicted RBP16.37■□□□□ 0.21
LINC00242-201ENST00000437615 SLC26A8Q96RN1 970 aa16.37■□□□□ 0.21
LINC00242-201ENST00000437615 PLEKHG1Q9ULL1 1385 aa16.36■□□□□ 0.21
LINC00242-201ENST00000437615 FAM135BQ49AJ0 1406 aa16.36■□□□□ 0.21
LINC00242-201ENST00000437615 ADAMTS13Q76LX8 1427 aa16.36■□□□□ 0.21
LINC00242-201ENST00000437615 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.35■□□□□ 0.21
LINC00242-201ENST00000437615 NUDT16Q96DE0 195 aaKnown RBP16.35■□□□□ 0.21
LINC00242-201ENST00000437615 TECPR2O15040 1411 aa16.34■□□□□ 0.21
LINC00242-201ENST00000437615 DUSP27Q5VZP5 1158 aa16.34■□□□□ 0.21
LINC00242-201ENST00000437615 NGEFQ8N5V2 710 aa16.34■□□□□ 0.21
LINC00242-201ENST00000437615 SLFN5Q08AF3 891 aa16.33■□□□□ 0.2
LINC00242-201ENST00000437615 RUNDC1Q96C34 613 aa16.33■□□□□ 0.2
LINC00242-201ENST00000437615 CCDC61Q9Y6R9 512 aa16.33■□□□□ 0.2
LINC00242-201ENST00000437615 ROBO2Q9HCK4 1378 aa16.33■□□□□ 0.2
LINC00242-201ENST00000437615 C3P01024 1663 aa16.32■□□□□ 0.2
LINC00242-201ENST00000437615 NCKAP5LQ9HCH0 1330 aa16.32■□□□□ 0.2
LINC00242-201ENST00000437615 U2AF1L5P0DN76 240 aaPredicted RBP16.31■□□□□ 0.2
LINC00242-201ENST00000437615 U2AF1Q01081 240 aaKnown RBP eCLIP16.31■□□□□ 0.2
LINC00242-201ENST00000437615 PPIP5K1Q6PFW1 1433 aa16.31■□□□□ 0.2
LINC00242-201ENST00000437615 NEUROD2Q15784 382 aa16.3■□□□□ 0.2
LINC00242-201ENST00000437615 TBX22Q9Y458 520 aa16.3■□□□□ 0.2
LINC00242-201ENST00000437615 SPINK5Q9NQ38 1064 aaPredicted RBP16.3■□□□□ 0.2
LINC00242-201ENST00000437615 AMOTL2Q9Y2J4 779 aa16.3■□□□□ 0.2
LINC00242-201ENST00000437615 TRMT2AQ8IZ69 625 aaKnown RBP16.29■□□□□ 0.2
LINC00242-201ENST00000437615 TCP11L2Q8N4U5 519 aa16.29■□□□□ 0.2
LINC00242-201ENST00000437615 MED14O60244 1454 aa16.29■□□□□ 0.2
LINC00242-201ENST00000437615 ATP7BP35670 1465 aa16.29■□□□□ 0.2
LINC00242-201ENST00000437615 FER1L4A9Z1Z3 1794 aa16.29■□□□□ 0.2
LINC00242-201ENST00000437615 WWC1Q8IX03 1113 aa16.29■□□□□ 0.2
LINC00242-201ENST00000437615 CCDC136Q96JN2 1154 aa16.29■□□□□ 0.2
LINC00242-201ENST00000437615 E9PSI1 815 aa16.28■□□□□ 0.2
LINC00242-201ENST00000437615 PLIN1O60240 522 aa16.28■□□□□ 0.2
LINC00242-201ENST00000437615 RRP7AQ9Y3A4 280 aaKnown RBP16.28■□□□□ 0.2
LINC00242-201ENST00000437615 ARHGAP23Q9P227 1491 aa16.28■□□□□ 0.2
LINC00242-201ENST00000437615 U2SURPO15042 1029 aaKnown RBP16.28■□□□□ 0.2
LINC00242-201ENST00000437615 SLIT1O75093 1534 aa16.28■□□□□ 0.2
LINC00242-201ENST00000437615 CPS1P31327 1500 aa16.27■□□□□ 0.2
LINC00242-201ENST00000437615 CPSF1Q10570 1443 aaKnown RBP16.27■□□□□ 0.2
LINC00242-201ENST00000437615 EXOC6Q8TAG9 804 aa16.27■□□□□ 0.19
LINC00242-201ENST00000437615 DMRT2Q9Y5R5 561 aa16.27■□□□□ 0.19
LINC00242-201ENST00000437615 PTPRUQ92729 1446 aa16.26■□□□□ 0.19
LINC00242-201ENST00000437615 FBLN1P23142 703 aa16.26■□□□□ 0.19
LINC00242-201ENST00000437615 ZNF692Q9BU19 519 aaPredicted RBP16.26■□□□□ 0.19
LINC00242-201ENST00000437615 PRR36Q9H6K5 1346 aa16.26■□□□□ 0.19
LINC00242-201ENST00000437615 NUTM2FA1L443 756 aa16.26■□□□□ 0.19
LINC00242-201ENST00000437615 SHPRHQ149N8 1683 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms