RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 ZNF335Q9H4Z2 1342 aaPredicted RBP7.69□□□□□ -1.18
RFC3-202ENST00000434425 SOX12O15370 315 aa7.68□□□□□ -1.18
RFC3-202ENST00000434425 AGLP35573 1532 aa7.68□□□□□ -1.18
RFC3-202ENST00000434425 CLIP1P30622 1438 aa7.68□□□□□ -1.18
RFC3-202ENST00000434425 CAMSAP1Q5T5Y3 1602 aa7.68□□□□□ -1.18
RFC3-202ENST00000434425 A0A0U1RQG5 324 aaPredicted RBP7.68□□□□□ -1.18
RFC3-202ENST00000434425 UBAP1LF5GYI3 381 aa7.68□□□□□ -1.18
RFC3-202ENST00000434425 HNRNPMP52272 730 aaKnown RBP eCLIP7.68□□□□□ -1.185e-7■■■■□ 19.5
RFC3-202ENST00000434425 ZNF777Q9ULD5 760 aaPredicted RBP7.68□□□□□ -1.18
RFC3-202ENST00000434425 MAFGO15525 162 aa7.67□□□□□ -1.18
RFC3-202ENST00000434425 CCDC82Q8N4S0 544 aa7.67□□□□□ -1.18
RFC3-202ENST00000434425 ITSN2Q9NZM3 1697 aa7.67□□□□□ -1.18
RFC3-202ENST00000434425 ABCC1P33527 1531 aa7.66□□□□□ -1.18
RFC3-202ENST00000434425 IQSEC2Q5JU85 1478 aa7.66□□□□□ -1.18
RFC3-202ENST00000434425 CNTLNQ9NXG0 1405 aa7.66□□□□□ -1.18
RFC3-202ENST00000434425 CDC42BPAQ5VT25 1732 aa7.65□□□□□ -1.18
RFC3-202ENST00000434425 SUPT6HQ7KZ85 1726 aaKnown RBP7.65□□□□□ -1.18
RFC3-202ENST00000434425 PREX2Q70Z35 1606 aa7.65□□□□□ -1.18
RFC3-202ENST00000434425 GGT6Q6P531 493 aa7.65□□□□□ -1.18
RFC3-202ENST00000434425 AEBP1Q8IUX7 1158 aa7.65□□□□□ -1.18
RFC3-202ENST00000434425 PLCD4Q9BRC7 762 aa7.65□□□□□ -1.18
RFC3-202ENST00000434425 SPAG9O60271 1321 aaKnown RBP7.64□□□□□ -1.19
RFC3-202ENST00000434425 CANXP27824 592 aaKnown RBP7.64□□□□□ -1.19
RFC3-202ENST00000434425 NPATQ14207 1427 aa7.64□□□□□ -1.19
RFC3-202ENST00000434425 MS4A3Q96HJ5 214 aa7.64□□□□□ -1.19
RFC3-202ENST00000434425 SAMD9LQ8IVG5 1584 aa7.63□□□□□ -1.19
RFC3-202ENST00000434425 GRIPAP1Q4V328 841 aa7.63□□□□□ -1.19
RFC3-202ENST00000434425 TMEM106CQ9BVX2 250 aa7.63□□□□□ -1.19
RFC3-202ENST00000434425 GZF1Q9H116 711 aaPredicted RBP7.63□□□□□ -1.19
RFC3-202ENST00000434425 MROH2AA6NES4 1674 aa7.63□□□□□ -1.19
RFC3-202ENST00000434425 CLTCQ00610 1675 aaKnown RBP7.63□□□□□ -1.19
RFC3-202ENST00000434425 CASKIN1Q8WXD9 1431 aa7.63□□□□□ -1.19
RFC3-202ENST00000434425 HSPA1LP34931 641 aa7.62□□□□□ -1.19
RFC3-202ENST00000434425 RBM10P98175 930 aaKnown RBP7.62□□□□□ -1.19
RFC3-202ENST00000434425 E2F4Q16254 413 aa7.62□□□□□ -1.19
RFC3-202ENST00000434425 PTPRKQ15262 1439 aa7.62□□□□□ -1.19
RFC3-202ENST00000434425 GPATCH8Q9UKJ3 1502 aaKnown RBP7.62□□□□□ -1.19
RFC3-202ENST00000434425 SEMA3EO15041 775 aa7.62□□□□□ -1.19
RFC3-202ENST00000434425 PIP4K2BP78356 416 aa7.62□□□□□ -1.19
RFC3-202ENST00000434425 ANP32EQ9BTT0 268 aa7.62□□□□□ -1.19
RFC3-202ENST00000434425 CLSPNQ9HAW4 1339 aa7.61□□□□□ -1.19
RFC3-202ENST00000434425 SYCP2Q9BX26 1530 aa7.61□□□□□ -1.19
RFC3-202ENST00000434425 ERICH6BQ5W0A0 696 aa7.61□□□□□ -1.19
RFC3-202ENST00000434425 LARP6Q9BRS8 491 aaKnown RBP7.61□□□□□ -1.19
RFC3-202ENST00000434425 CFDP1Q9UEE9 299 aaPredicted RBP7.61□□□□□ -1.19
RFC3-202ENST00000434425 TCOF1Q13428 1488 aaKnown RBP7.61□□□□□ -1.19
RFC3-202ENST00000434425 CCDC18Q5T9S5 1454 aa7.61□□□□□ -1.19
RFC3-202ENST00000434425 ZNF644Q9H582 1327 aaPredicted RBP7.6□□□□□ -1.19
RFC3-202ENST00000434425 A2MP01023 1474 aa7.6□□□□□ -1.19
RFC3-202ENST00000434425 PLA2R1Q13018 1463 aa7.6□□□□□ -1.19
RFC3-202ENST00000434425 PTMSP20962 102 aa7.6□□□□□ -1.19
RFC3-202ENST00000434425 FBXO31Q5XUX0 539 aaPredicted RBP7.6□□□□□ -1.19
RFC3-202ENST00000434425 ARHGEF1Q92888 912 aaKnown RBP7.6□□□□□ -1.19
RFC3-202ENST00000434425 SLC24A3Q9HC58 644 aa7.6□□□□□ -1.19
RFC3-202ENST00000434425 MYO3AQ8NEV4 1616 aa7.6□□□□□ -1.19
RFC3-202ENST00000434425 ZNF142P52746 1687 aaPredicted RBP7.59□□□□□ -1.19
RFC3-202ENST00000434425 CEP170BQ9Y4F5 1589 aaPredicted RBP7.59□□□□□ -1.19
RFC3-202ENST00000434425 MCCP23508 829 aa7.59□□□□□ -1.19
RFC3-202ENST00000434425 ZC3H15Q8WU90 426 aaKnown RBP7.59□□□□□ -1.19
RFC3-202ENST00000434425 PRDM10Q9NQV6 1147 aa7.59□□□□□ -1.19
RFC3-202ENST00000434425 ATP7AQ04656 1500 aa7.59□□□□□ -1.19
RFC3-202ENST00000434425 KIAA1107Q9UPP5 1409 aa7.59□□□□□ -1.19
RFC3-202ENST00000434425 DNMT1P26358 1616 aaKnown RBP7.58□□□□□ -1.2
RFC3-202ENST00000434425 ZNF316A6NFI3 1004 aaPredicted RBP7.58□□□□□ -1.2
RFC3-202ENST00000434425 TOM1O60784 492 aa7.58□□□□□ -1.2
RFC3-202ENST00000434425 ANAPC15P60006 121 aa7.58□□□□□ -1.2
RFC3-202ENST00000434425 MKRN3Q13064 507 aaKnown RBP7.58□□□□□ -1.2
RFC3-202ENST00000434425 EXOC8Q8IYI6 725 aa7.58□□□□□ -1.2
RFC3-202ENST00000434425 CRISPLD2Q9H0B8 497 aa7.58□□□□□ -1.2
RFC3-202ENST00000434425 AMOTL2Q9Y2J4 779 aa7.58□□□□□ -1.2
RFC3-202ENST00000434425 PLXNC1O60486 1568 aa7.58□□□□□ -1.2
RFC3-202ENST00000434425 KDM4AO75164 1064 aa7.57□□□□□ -1.2
RFC3-202ENST00000434425 MFSD10Q14728 455 aa7.57□□□□□ -1.2
RFC3-202ENST00000434425 ZNF526Q8TF50 670 aaPredicted RBP7.57□□□□□ -1.2
RFC3-202ENST00000434425 IGSF5Q9NSI5 407 aa7.57□□□□□ -1.2
RFC3-202ENST00000434425 CCNB3Q8WWL7 1395 aa7.57□□□□□ -1.2
RFC3-202ENST00000434425 INO80Q9ULG1 1556 aaPredicted RBP7.56□□□□□ -1.2
RFC3-202ENST00000434425 TESPA1A2RU30 521 aaPredicted RBP7.56□□□□□ -1.2
RFC3-202ENST00000434425 PDE4AP27815 886 aa7.56□□□□□ -1.2
RFC3-202ENST00000434425 DNAJC2Q99543 621 aaKnown RBP7.56□□□□□ -1.2
RFC3-202ENST00000434425 A2ML1A8K2U0 1454 aa7.56□□□□□ -1.2
RFC3-202ENST00000434425 TTLL13PA6NNM8 815 aa7.55□□□□□ -1.2
RFC3-202ENST00000434425 KIF3BO15066 747 aa7.55□□□□□ -1.2
RFC3-202ENST00000434425 BARGINQ6ZT62 677 aa7.55□□□□□ -1.2
RFC3-202ENST00000434425 ANKLE2Q86XL3 938 aa7.55□□□□□ -1.2
RFC3-202ENST00000434425 CNPY4Q8N129 248 aa7.55□□□□□ -1.2
RFC3-202ENST00000434425 SCUBE2Q9NQ36 999 aa7.55□□□□□ -1.2
RFC3-202ENST00000434425 PLEKHH2Q8IVE3 1493 aa7.55□□□□□ -1.2
RFC3-202ENST00000434425 FYCO1Q9BQS8 1478 aa7.55□□□□□ -1.2
RFC3-202ENST00000434425 SHANK2Q9UPX8 1470 aa7.55□□□□□ -1.2
RFC3-202ENST00000434425 DHX29Q7Z478 1369 aaKnown RBP7.55□□□□□ -1.2
RFC3-202ENST00000434425 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.55□□□□□ -1.2
RFC3-202ENST00000434425 MED1Q15648 1581 aaPredicted RBP7.55□□□□□ -1.2
RFC3-202ENST00000434425 ADGBQ8N7X0 1667 aa7.55□□□□□ -1.2
RFC3-202ENST00000434425 MBD5Q9P267 1494 aa7.55□□□□□ -1.2
RFC3-202ENST00000434425 LOC102724159A0A0B4J2E5 919 aa7.55□□□□□ -1.2
RFC3-202ENST00000434425 GOLGA2Q08379 1002 aa7.55□□□□□ -1.2
RFC3-202ENST00000434425 PWP2Q15269 919 aaKnown RBP7.55□□□□□ -1.2
RFC3-202ENST00000434425 BMP2KQ9NSY1 1161 aaPredicted RBP7.55□□□□□ -1.2
RFC3-202ENST00000434425 RIPOR2Q9Y4F9 1068 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms