RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 ERICH6BQ5W0A0 696 aa17.33■□□□□ 0.37
DDX56-204ENST00000431640 CNGB1Q14028 1251 aaPredicted RBP17.32■□□□□ 0.36
DDX56-204ENST00000431640 NLRP13Q86W25 1043 aa17.32■□□□□ 0.36
DDX56-204ENST00000431640 ANKLE2Q86XL3 938 aa17.32■□□□□ 0.36
DDX56-204ENST00000431640 SLC26A8Q96RN1 970 aa17.32■□□□□ 0.36
DDX56-204ENST00000431640 PANK3Q9H999 370 aa17.32■□□□□ 0.36
DDX56-204ENST00000431640 CPS1P31327 1500 aa17.32■□□□□ 0.36
DDX56-204ENST00000431640 QRICH2Q9H0J4 1663 aa17.31■□□□□ 0.36
DDX56-204ENST00000431640 HDGFP51858 240 aaKnown RBP17.3■□□□□ 0.36
DDX56-204ENST00000431640 CHD2O14647 1828 aaKnown RBP17.29■□□□□ 0.36
DDX56-204ENST00000431640 LRPPRCP42704 1394 aaKnown RBP17.29■□□□□ 0.36
DDX56-204ENST00000431640 DLC1Q96QB1 1528 aa17.29■□□□□ 0.36
DDX56-204ENST00000431640 TECPR2O15040 1411 aa17.28■□□□□ 0.36
DDX56-204ENST00000431640 STRCP1A6NGW2 1772 aa17.28■□□□□ 0.36
DDX56-204ENST00000431640 TRAK1Q9UPV9 953 aa17.28■□□□□ 0.36
DDX56-204ENST00000431640 NWD1Q149M9 1564 aa17.27■□□□□ 0.36
DDX56-204ENST00000431640 BCANQ96GW7 911 aa17.26■□□□□ 0.35
DDX56-204ENST00000431640 STK26Q9P289 416 aa17.26■□□□□ 0.35
DDX56-204ENST00000431640 TBX22Q9Y458 520 aa17.26■□□□□ 0.35
DDX56-204ENST00000431640 PLEKHH1Q9ULM0 1364 aa17.26■□□□□ 0.35
DDX56-204ENST00000431640 KNSTRNQ9Y448 316 aa17.25■□□□□ 0.35
DDX56-204ENST00000431640 INSRP06213 1382 aa17.25■□□□□ 0.35
DDX56-204ENST00000431640 ABCC11Q96J66 1382 aa17.24■□□□□ 0.35
DDX56-204ENST00000431640 ROBO2Q9HCK4 1378 aa17.24■□□□□ 0.35
DDX56-204ENST00000431640 SMG6Q86US8 1419 aaKnown RBP17.24■□□□□ 0.35
DDX56-204ENST00000431640 TULP4Q9NRJ4 1543 aa17.23■□□□□ 0.35
DDX56-204ENST00000431640 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.23■□□□□ 0.35
DDX56-204ENST00000431640 PTCH1Q13635 1447 aa17.22■□□□□ 0.35
DDX56-204ENST00000431640 SBNO2Q9Y2G9 1366 aa17.22■□□□□ 0.35
DDX56-204ENST00000431640 CC2D1BQ5T0F9 858 aaKnown RBP17.22■□□□□ 0.35
DDX56-204ENST00000431640 PIK3R4Q99570 1358 aa17.21■□□□□ 0.35
DDX56-204ENST00000431640 NUDCQ9Y266 331 aa17.21■□□□□ 0.35
DDX56-204ENST00000431640 NPC1L1Q9UHC9 1359 aa17.2■□□□□ 0.34
DDX56-204ENST00000431640 CENPJQ9HC77 1338 aaPredicted RBP17.19■□□□□ 0.34
DDX56-204ENST00000431640 NALCNQ8IZF0 1738 aa17.19■□□□□ 0.34
DDX56-204ENST00000431640 FAM135BQ49AJ0 1406 aa17.19■□□□□ 0.34
DDX56-204ENST00000431640 KCNA6P17658 529 aa17.19■□□□□ 0.34
DDX56-204ENST00000431640 WAPLQ7Z5K2 1190 aa17.19■□□□□ 0.34
DDX56-204ENST00000431640 PRAM1Q96QH2 718 aa17.19■□□□□ 0.34
DDX56-204ENST00000431640 MYOM1P52179 1685 aa17.19■□□□□ 0.34
DDX56-204ENST00000431640 SAFB2Q14151 953 aaKnown RBP eCLIP17.18■□□□□ 0.34
DDX56-204ENST00000431640 AMOTL2Q9Y2J4 779 aa17.18■□□□□ 0.34
DDX56-204ENST00000431640 ADGRB2O60241 1585 aa17.18■□□□□ 0.34
DDX56-204ENST00000431640 PDE3BQ13370 1112 aa17.17■□□□□ 0.34
DDX56-204ENST00000431640 AMER1Q5JTC6 1135 aaPredicted RBP17.15■□□□□ 0.34
DDX56-204ENST00000431640 XIRP1Q702N8 1843 aaKnown RBP17.15■□□□□ 0.34
DDX56-204ENST00000431640 PUS7Q96PZ0 661 aaKnown RBP17.15■□□□□ 0.34
DDX56-204ENST00000431640 PPP4R2Q9NY27 417 aa17.15■□□□□ 0.34
DDX56-204ENST00000431640 NKTRP30414 1462 aaKnown RBP17.14■□□□□ 0.33
DDX56-204ENST00000431640 MINK1Q8N4C8 1332 aaPredicted RBP17.12■□□□□ 0.33
DDX56-204ENST00000431640 ZNF335Q9H4Z2 1342 aaPredicted RBP17.11■□□□□ 0.33
DDX56-204ENST00000431640 PPP2R1AP30153 589 aa17.11■□□□□ 0.33
DDX56-204ENST00000431640 SIRT1Q96EB6 747 aa17.11■□□□□ 0.33
DDX56-204ENST00000431640 RBM33Q96EV2 1170 aaKnown RBP17.11■□□□□ 0.33
DDX56-204ENST00000431640 USP32Q8NFA0 1604 aa17.1■□□□□ 0.33
DDX56-204ENST00000431640 RNF123Q5XPI4 1314 aa17.1■□□□□ 0.33
DDX56-204ENST00000431640 POGKQ9P215 609 aa17.1■□□□□ 0.33
DDX56-204ENST00000431640 BLMP54132 1417 aaPredicted RBP17.09■□□□□ 0.33
DDX56-204ENST00000431640 CDC42BPGQ6DT37 1551 aa17.08■□□□□ 0.32
DDX56-204ENST00000431640 TOPAZ1Q8N9V7 1692 aa17.08■□□□□ 0.32
DDX56-204ENST00000431640 IRX6P78412 446 aaPredicted RBP17.07■□□□□ 0.32
DDX56-204ENST00000431640 TSHZ2Q9NRE2 1034 aa17.07■□□□□ 0.32
DDX56-204ENST00000431640 FMN2Q9NZ56 1722 aa17.07■□□□□ 0.32
DDX56-204ENST00000431640 WDR43Q15061 677 aaKnown RBP eCLIP17.06■□□□□ 0.32
DDX56-204ENST00000431640 ADGRL3Q9HAR2 1447 aa17.06■□□□□ 0.32
DDX56-204ENST00000431640 LRRC7Q96NW7 1537 aa17.06■□□□□ 0.32
DDX56-204ENST00000431640 ATP7BP35670 1465 aa17.06■□□□□ 0.32
DDX56-204ENST00000431640 LTBP4Q8N2S1 1624 aa17.05■□□□□ 0.32
DDX56-204ENST00000431640 EVC2Q86UK5 1308 aa17.05■□□□□ 0.32
DDX56-204ENST00000431640 AEBP2Q6ZN18 517 aaPredicted RBP17.05■□□□□ 0.32
DDX56-204ENST00000431640 CARD14Q9BXL6 1004 aa17.03■□□□□ 0.32
DDX56-204ENST00000431640 CABP2Q9NPB3 220 aa17.03■□□□□ 0.32
DDX56-204ENST00000431640 TMEM94Q12767 1356 aa17.03■□□□□ 0.32
DDX56-204ENST00000431640 RGPD8O14715 1765 aaPredicted RBP17.03■□□□□ 0.32
DDX56-204ENST00000431640 PRR36Q9H6K5 1346 aa17.03■□□□□ 0.32
DDX56-204ENST00000431640 ADAMTS8Q9UP79 889 aa17.02■□□□□ 0.32
DDX56-204ENST00000431640 WASLO00401 505 aaPredicted RBP17.01■□□□□ 0.31
DDX56-204ENST00000431640 CDK19Q9BWU1 502 aa17.01■□□□□ 0.31
DDX56-204ENST00000431640 CD163L1Q9NR16 1453 aa17■□□□□ 0.31
DDX56-204ENST00000431640 PROSER2Q86WR7 435 aaPredicted RBP16.99■□□□□ 0.31
DDX56-204ENST00000431640 DMRT2Q9Y5R5 561 aa16.99■□□□□ 0.31
DDX56-204ENST00000431640 NGEFQ8N5V2 710 aa16.98■□□□□ 0.31
DDX56-204ENST00000431640 RCAN3Q9UKA8 241 aa16.98■□□□□ 0.31
DDX56-204ENST00000431640 NINLQ9Y2I6 1382 aa16.98■□□□□ 0.31
DDX56-204ENST00000431640 SALL2Q9Y467 1007 aaPredicted RBP16.98■□□□□ 0.31
DDX56-204ENST00000431640 ITSN1Q15811 1721 aa16.97■□□□□ 0.31
DDX56-204ENST00000431640 SRPK2P78362 688 aaKnown RBP16.97■□□□□ 0.31
DDX56-204ENST00000431640 SLC12A5Q9H2X9 1139 aa16.97■□□□□ 0.31
DDX56-204ENST00000431640 NUTM2FA1L443 756 aa16.96■□□□□ 0.31
DDX56-204ENST00000431640 ATAD2Q6PL18 1390 aa16.96■□□□□ 0.31
DDX56-204ENST00000431640 NCOA3Q9Y6Q9 1424 aa16.96■□□□□ 0.3
DDX56-204ENST00000431640 SENP3-EIF4A1A0A087X0R7 540 aa16.95■□□□□ 0.3
DDX56-204ENST00000431640 MORC1Q86VD1 984 aa16.95■□□□□ 0.3
DDX56-204ENST00000431640 CGNL1Q0VF96 1302 aa16.95■□□□□ 0.3
DDX56-204ENST00000431640 AKAP12Q02952 1782 aa16.95■□□□□ 0.3
DDX56-204ENST00000431640 POLR3AO14802 1390 aaPredicted RBP16.95■□□□□ 0.3
DDX56-204ENST00000431640 NSD3Q9BZ95 1437 aa16.95■□□□□ 0.3
DDX56-204ENST00000431640 NSD2O96028 1365 aa16.94■□□□□ 0.3
DDX56-204ENST00000431640 DCCP43146 1447 aa16.94■□□□□ 0.3
DDX56-204ENST00000431640 PPIP5K1Q6PFW1 1433 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms