RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 RSPH4AQ5TD94 716 aa16.25■□□□□ 0.19
CDK12-201ENST00000430627 CGNL1Q0VF96 1302 aa16.25■□□□□ 0.19
CDK12-201ENST00000430627 CSPP1Q1MSJ5 1256 aa16.24■□□□□ 0.19
CDK12-201ENST00000430627 GOLGA6L1Q8N7Z2 621 aa16.24■□□□□ 0.19
CDK12-201ENST00000430627 TPM1P09493 284 aa16.24■□□□□ 0.19
CDK12-201ENST00000430627 PLEKHO1Q53GL0 409 aaPredicted RBP16.24■□□□□ 0.19
CDK12-201ENST00000430627 BRMS1Q9HCU9 246 aa16.24■□□□□ 0.19
CDK12-201ENST00000430627 HSPA5P11021 654 aaKnown RBP16.24■□□□□ 0.19
CDK12-201ENST00000430627 ZC3H6P61129 1189 aaKnown RBP16.24■□□□□ 0.19
CDK12-201ENST00000430627 CDK5RAP3Q96JB5 506 aa16.24■□□□□ 0.19
CDK12-201ENST00000430627 PODXL2Q9NZ53 605 aa16.24■□□□□ 0.19
CDK12-201ENST00000430627 TTC39AQ5SRH9 613 aa16.23■□□□□ 0.19
CDK12-201ENST00000430627 MPHOSPH9Q99550 1183 aa16.23■□□□□ 0.19
CDK12-201ENST00000430627 MPHOSPH8Q99549 860 aa16.23■□□□□ 0.19
CDK12-201ENST00000430627 MSNP26038 577 aaKnown RBP16.22■□□□□ 0.19
CDK12-201ENST00000430627 RALYLQ86SE5 291 aaKnown RBP16.22■□□□□ 0.19
CDK12-201ENST00000430627 SLC26A8Q96RN1 970 aa16.22■□□□□ 0.19
CDK12-201ENST00000430627 SPINK5Q9NQ38 1064 aaPredicted RBP16.22■□□□□ 0.19
CDK12-201ENST00000430627 RPGRQ92834 1020 aaKnown RBP16.22■□□□□ 0.19
CDK12-201ENST00000430627 SPG7Q9UQ90 795 aa16.21■□□□□ 0.19
CDK12-201ENST00000430627 DIAPH1O60610 1272 aaKnown RBP16.21■□□□□ 0.19
CDK12-201ENST00000430627 DNAJC2Q99543 621 aaKnown RBP16.21■□□□□ 0.19
CDK12-201ENST00000430627 ANKIB1Q9P2G1 1089 aa16.21■□□□□ 0.19
CDK12-201ENST00000430627 E9PSI1 815 aa16.2■□□□□ 0.18
CDK12-201ENST00000430627 CCAR2Q8N163 923 aaKnown RBP16.2■□□□□ 0.18
CDK12-201ENST00000430627 EP400NLQ6ZTU2 488 aa16.2■□□□□ 0.18
CDK12-201ENST00000430627 CRACR2BQ8N4Y2 399 aaPredicted RBP16.2■□□□□ 0.18
CDK12-201ENST00000430627 IL27Q8NEV9 243 aa16.2■□□□□ 0.18
CDK12-201ENST00000430627 ZHX3Q9H4I2 956 aa16.2■□□□□ 0.18
CDK12-201ENST00000430627 ZNF76P36508 570 aa16.2■□□□□ 0.18
CDK12-201ENST00000430627 SAFBQ15424 915 aaKnown RBP eCLIP16.2■□□□□ 0.18
CDK12-201ENST00000430627 MYL6BP14649 208 aa16.19■□□□□ 0.18
CDK12-201ENST00000430627 SYAP1Q96A49 352 aaPredicted RBP16.19■□□□□ 0.18
CDK12-201ENST00000430627 PDCL3Q9H2J4 239 aa16.18■□□□□ 0.18
CDK12-201ENST00000430627 ZNF408Q9H9D4 720 aa16.18■□□□□ 0.18
CDK12-201ENST00000430627 ZNF710Q8N1W2 664 aa16.18■□□□□ 0.18
CDK12-201ENST00000430627 ANKRD20A12PQ8NF67 263 aa16.18■□□□□ 0.18
CDK12-201ENST00000430627 CABP2Q9NPB3 220 aa16.18■□□□□ 0.18
CDK12-201ENST00000430627 STAC3Q96MF2 364 aa16.18■□□□□ 0.18
CDK12-201ENST00000430627 SART3Q15020 963 aaKnown RBP16.17■□□□□ 0.18
CDK12-201ENST00000430627 RUFY2Q8WXA3 655 aa16.17■□□□□ 0.18
CDK12-201ENST00000430627 ANKRD45Q5TZF3 282 aa16.17■□□□□ 0.18
CDK12-201ENST00000430627 DHX57Q6P158 1386 aaKnown RBP16.16■□□□□ 0.18
CDK12-201ENST00000430627 CCDC18Q5T9S5 1454 aa16.16■□□□□ 0.18
CDK12-201ENST00000430627 CCDC144AA2RUR9 1427 aa16.16■□□□□ 0.18
CDK12-201ENST00000430627 CENPJQ9HC77 1338 aaPredicted RBP16.16■□□□□ 0.18
CDK12-201ENST00000430627 TRIM21P19474 475 aaKnown RBP16.16■□□□□ 0.18
CDK12-201ENST00000430627 SYCP1Q15431 976 aa16.15■□□□□ 0.18
CDK12-201ENST00000430627 NLRP13Q86W25 1043 aa16.15■□□□□ 0.18
CDK12-201ENST00000430627 CCDC85AQ96PX6 553 aaPredicted RBP16.15■□□□□ 0.18
CDK12-201ENST00000430627 ARID3AQ99856 593 aa16.15■□□□□ 0.18
CDK12-201ENST00000430627 OFD1O75665 1012 aa16.15■□□□□ 0.18
CDK12-201ENST00000430627 GPR162Q16538 588 aa16.15■□□□□ 0.18
CDK12-201ENST00000430627 XBP1P17861 261 aa16.14■□□□□ 0.17
CDK12-201ENST00000430627 ZMYND15Q9H091 742 aa16.14■□□□□ 0.17
CDK12-201ENST00000430627 IPO7O95373 1038 aaKnown RBP16.14■□□□□ 0.17
CDK12-201ENST00000430627 USP5P45974 858 aa16.14■□□□□ 0.17
CDK12-201ENST00000430627 ATP2B1P20020 1258 aa16.13■□□□□ 0.17
CDK12-201ENST00000430627 HSP90AB4PQ58FF6 505 aa16.13■□□□□ 0.17
CDK12-201ENST00000430627 TMEM132EQ6IEE7 984 aa16.13■□□□□ 0.17
CDK12-201ENST00000430627 RTN4Q9NQC3 1192 aaKnown RBP16.13■□□□□ 0.17
CDK12-201ENST00000430627 ZKSCAN1P17029 563 aaPredicted RBP16.13■□□□□ 0.17
CDK12-201ENST00000430627 GZF1Q9H116 711 aaPredicted RBP16.13■□□□□ 0.17
CDK12-201ENST00000430627 RAI14Q9P0K7 980 aa16.13■□□□□ 0.17
CDK12-201ENST00000430627 ST20-MTHFSA0A0A6YYL1 179 aa16.12■□□□□ 0.17
CDK12-201ENST00000430627 LMOD1P29536 600 aaPredicted RBP16.12■□□□□ 0.17
CDK12-201ENST00000430627 MTHFSP49914 203 aa16.12■□□□□ 0.17
CDK12-201ENST00000430627 ZNF652Q9Y2D9 606 aa16.12■□□□□ 0.17
CDK12-201ENST00000430627 RIPK4P57078 832 aa16.12■□□□□ 0.17
CDK12-201ENST00000430627 GBP4Q96PP9 640 aa16.12■□□□□ 0.17
CDK12-201ENST00000430627 TMOD3Q9NYL9 352 aa16.12■□□□□ 0.17
CDK12-201ENST00000430627 NF2P35240 595 aa16.11■□□□□ 0.17
CDK12-201ENST00000430627 PPP6R1Q9UPN7 881 aa16.11■□□□□ 0.17
CDK12-201ENST00000430627 ST18O60284 1047 aa16.11■□□□□ 0.17
CDK12-201ENST00000430627 RBM26Q5T8P6 1007 aaKnown RBP16.11■□□□□ 0.17
CDK12-201ENST00000430627 IGHMBP2P38935 993 aaKnown RBP16.11■□□□□ 0.17
CDK12-201ENST00000430627 FANCD2Q9BXW9 1451 aa16.1■□□□□ 0.17
CDK12-201ENST00000430627 C6orf229H3BNL8 230 aa16.1■□□□□ 0.17
CDK12-201ENST00000430627 MPRIPQ6WCQ1 1025 aa16.1■□□□□ 0.17
CDK12-201ENST00000430627 FMN1Q68DA7 1419 aa16.1■□□□□ 0.17
CDK12-201ENST00000430627 CCDC158Q5M9N0 1113 aa16.1■□□□□ 0.17
CDK12-201ENST00000430627 HOOK1Q9UJC3 728 aaKnown RBP16.1■□□□□ 0.17
CDK12-201ENST00000430627 RFC4P35249 363 aa16.09■□□□□ 0.17
CDK12-201ENST00000430627 PPP4R3AQ6IN85 833 aa16.09■□□□□ 0.17
CDK12-201ENST00000430627 CCDC70Q6NSX1 233 aa16.09■□□□□ 0.17
CDK12-201ENST00000430627 GGNBP2Q9H3C7 697 aa16.09■□□□□ 0.17
CDK12-201ENST00000430627 PIBF1Q8WXW3 757 aa16.09■□□□□ 0.17
CDK12-201ENST00000430627 SOGA3Q5TF21 947 aa16.09■□□□□ 0.17
CDK12-201ENST00000430627 FEZ1Q99689 392 aa16.09■□□□□ 0.17
CDK12-201ENST00000430627 FHOD3Q2V2M9 1422 aa16.08■□□□□ 0.17
CDK12-201ENST00000430627 MYO1BO43795 1136 aa16.08■□□□□ 0.17
CDK12-201ENST00000430627 RDXP35241 583 aaKnown RBP16.08■□□□□ 0.16
CDK12-201ENST00000430627 RALBP1Q15311 655 aa16.08■□□□□ 0.16
CDK12-201ENST00000430627 RNF20Q5VTR2 975 aa16.08■□□□□ 0.16
CDK12-201ENST00000430627 BECN2A8MW95 431 aa16.07■□□□□ 0.16
CDK12-201ENST00000430627 LIG1P18858 919 aa16.07■□□□□ 0.16
CDK12-201ENST00000430627 PANK3Q9H999 370 aa16.07■□□□□ 0.16
CDK12-201ENST00000430627 ZNF530Q6P9A1 599 aaPredicted RBP16.07■□□□□ 0.16
CDK12-201ENST00000430627 ERC1Q8IUD2 1116 aa16.07■□□□□ 0.16
CDK12-201ENST00000430627 GOLGA6L19H0YKK7 550 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms