RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 GBP4Q96PP9 640 aa20.6■□□□□ 0.89
RHBDF1-204ENST00000428730 NGEFQ8N5V2 710 aa20.59■□□□□ 0.89
RHBDF1-204ENST00000428730 IQGAP1P46940 1657 aa20.59■□□□□ 0.89
RHBDF1-204ENST00000428730 ARID3AQ99856 593 aa20.59■□□□□ 0.89
RHBDF1-204ENST00000428730 SAMD9LQ8IVG5 1584 aa20.59■□□□□ 0.89
RHBDF1-204ENST00000428730 ZSCAN30Q86W11 494 aa20.58■□□□□ 0.89
RHBDF1-204ENST00000428730 SCAF11Q99590 1463 aaKnown RBP20.58■□□□□ 0.89
RHBDF1-204ENST00000428730 SMC5Q8IY18 1101 aa20.58■□□□□ 0.88
RHBDF1-204ENST00000428730 CCDC173Q0VFZ6 552 aa20.57■□□□□ 0.88
RHBDF1-204ENST00000428730 FAM13BQ9NYF5 915 aa20.57■□□□□ 0.88
RHBDF1-204ENST00000428730 OFD1O75665 1012 aa20.57■□□□□ 0.88
RHBDF1-204ENST00000428730 FBLN2P98095 1184 aa20.57■□□□□ 0.88
RHBDF1-204ENST00000428730 UNC13BO14795 1591 aa20.57■□□□□ 0.88
RHBDF1-204ENST00000428730 SSFA2P28290 1259 aa20.56■□□□□ 0.88
RHBDF1-204ENST00000428730 DZIP1LQ8IYY4 767 aaKnown RBP20.56■□□□□ 0.88
RHBDF1-204ENST00000428730 RUNDC1Q96C34 613 aa20.56■□□□□ 0.88
RHBDF1-204ENST00000428730 PRDM4Q9UKN5 801 aa20.56■□□□□ 0.88
RHBDF1-204ENST00000428730 MADDQ8WXG6 1647 aa20.56■□□□□ 0.88
RHBDF1-204ENST00000428730 PPP1R9BQ96SB3 815 aa20.56■□□□□ 0.88
RHBDF1-204ENST00000428730 ABCA8O94911 1581 aa20.55■□□□□ 0.88
RHBDF1-204ENST00000428730 R3HCC1Q9Y3T6 440 aaKnown RBP20.55■□□□□ 0.88
RHBDF1-204ENST00000428730 ZKSCAN2Q63HK3 967 aa20.55■□□□□ 0.88
RHBDF1-204ENST00000428730 RBM25P49756 843 aaKnown RBP20.54■□□□□ 0.88
RHBDF1-204ENST00000428730 CALD1Q05682 793 aaKnown RBP20.54■□□□□ 0.88
RHBDF1-204ENST00000428730 SNX21Q969T3 373 aa20.54■□□□□ 0.88
RHBDF1-204ENST00000428730 ITPRIPQ8IWB1 547 aa20.54■□□□□ 0.88
RHBDF1-204ENST00000428730 TSR2Q969E8 191 aaKnown RBP20.54■□□□□ 0.88
RHBDF1-204ENST00000428730 RBM42Q9BTD8 480 aaKnown RBP20.54■□□□□ 0.88
RHBDF1-204ENST00000428730 SYCP2Q9BX26 1530 aa20.54■□□□□ 0.88
RHBDF1-204ENST00000428730 MSNP26038 577 aaKnown RBP20.53■□□□□ 0.88
RHBDF1-204ENST00000428730 SKOR2Q2VWA4 1001 aaPredicted RBP20.53■□□□□ 0.88
RHBDF1-204ENST00000428730 POLR3AO14802 1390 aaPredicted RBP20.53■□□□□ 0.88
RHBDF1-204ENST00000428730 JPH4Q96JJ6 628 aa20.53■□□□□ 0.88
RHBDF1-204ENST00000428730 PHF23Q9BUL5 403 aaPredicted RBP20.53■□□□□ 0.88
RHBDF1-204ENST00000428730 KIF2CQ99661 725 aa20.52■□□□□ 0.88
RHBDF1-204ENST00000428730 LNPKQ9C0E8 428 aa20.52■□□□□ 0.88
RHBDF1-204ENST00000428730 CIZ1Q9ULV3 898 aaPredicted RBP20.52■□□□□ 0.88
RHBDF1-204ENST00000428730 TRIM27P14373 513 aa20.51■□□□□ 0.87
RHBDF1-204ENST00000428730 PODXL2Q9NZ53 605 aa20.51■□□□□ 0.87
RHBDF1-204ENST00000428730 IQGAP3Q86VI3 1631 aa20.51■□□□□ 0.87
RHBDF1-204ENST00000428730 WDR63Q8IWG1 891 aa20.51■□□□□ 0.87
RHBDF1-204ENST00000428730 CHMP7Q8WUX9 453 aaPredicted RBP20.51■□□□□ 0.87
RHBDF1-204ENST00000428730 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.51■□□□□ 0.87
RHBDF1-204ENST00000428730 IQSEC2Q5JU85 1478 aa20.51■□□□□ 0.87
RHBDF1-204ENST00000428730 HDAC1Q13547 482 aaPredicted RBP20.5■□□□□ 0.87
RHBDF1-204ENST00000428730 SMC4Q9NTJ3 1288 aa20.5■□□□□ 0.87
RHBDF1-204ENST00000428730 DDX49Q9Y6V7 483 aaKnown RBP20.5■□□□□ 0.87
RHBDF1-204ENST00000428730 ATP10AO60312 1499 aa20.5■□□□□ 0.87
RHBDF1-204ENST00000428730 XPCQ01831 940 aaPredicted RBP20.5■□□□□ 0.87
RHBDF1-204ENST00000428730 CARMIL2Q6F5E8 1435 aa20.49■□□□□ 0.87
RHBDF1-204ENST00000428730 GAS2L2Q8NHY3 880 aa20.49■□□□□ 0.87
RHBDF1-204ENST00000428730 SCAPERQ9BY12 1400 aa20.49■□□□□ 0.87
RHBDF1-204ENST00000428730 MORC1Q86VD1 984 aa20.49■□□□□ 0.87
RHBDF1-204ENST00000428730 PLEKHG5O94827 1062 aa20.48■□□□□ 0.87
RHBDF1-204ENST00000428730 ANP32BQ92688 251 aaKnown RBP20.48■□□□□ 0.87
RHBDF1-204ENST00000428730 ERVK-7P63135 1459 aa20.48■□□□□ 0.87
RHBDF1-204ENST00000428730 CEP152O94986 1710 aa20.47■□□□□ 0.87
RHBDF1-204ENST00000428730 KDM5AP29375 1690 aaKnown RBP20.47■□□□□ 0.87
RHBDF1-204ENST00000428730 CDC42BPBQ9Y5S2 1711 aa20.47■□□□□ 0.87
RHBDF1-204ENST00000428730 SHPRHQ149N8 1683 aa20.47■□□□□ 0.87
RHBDF1-204ENST00000428730 CFAP70Q5T0N1 1121 aa20.46■□□□□ 0.87
RHBDF1-204ENST00000428730 RSPH4AQ5TD94 716 aa20.46■□□□□ 0.87
RHBDF1-204ENST00000428730 NCLP19338 710 aaKnown RBP20.46■□□□□ 0.87
RHBDF1-204ENST00000428730 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.46■□□□□ 0.87
RHBDF1-204ENST00000428730 K7ELQ4 463 aaPredicted RBP20.45■□□□□ 0.86
RHBDF1-204ENST00000428730 SSH1Q8WYL5 1049 aa20.45■□□□□ 0.86
RHBDF1-204ENST00000428730 UQCRHLA0A096LP55 91 aa20.45■□□□□ 0.86
RHBDF1-204ENST00000428730 BAG4O95429 457 aaKnown RBP20.45■□□□□ 0.86
RHBDF1-204ENST00000428730 UQCRHP07919 91 aa20.45■□□□□ 0.86
RHBDF1-204ENST00000428730 EXOSC9Q06265 439 aaKnown RBP20.45■□□□□ 0.86
RHBDF1-204ENST00000428730 TMEM57Q8N5G2 664 aa20.45■□□□□ 0.86
RHBDF1-204ENST00000428730 KLHL40Q2TBA0 621 aa20.44■□□□□ 0.86
RHBDF1-204ENST00000428730 CAVIN1Q6NZI2 390 aaKnown RBP20.44■□□□□ 0.86
RHBDF1-204ENST00000428730 MTHFSP49914 203 aa20.44■□□□□ 0.86
RHBDF1-204ENST00000428730 DDX19BQ9UMR2 479 aa20.43■□□□□ 0.86
RHBDF1-204ENST00000428730 NSD3Q9BZ95 1437 aa20.43■□□□□ 0.86
RHBDF1-204ENST00000428730 NOB1Q9ULX3 412 aaKnown RBP20.43■□□□□ 0.86
RHBDF1-204ENST00000428730 MRC2Q9UBG0 1479 aa20.43■□□□□ 0.86
RHBDF1-204ENST00000428730 MAST1Q9Y2H9 1570 aa20.42■□□□□ 0.86
RHBDF1-204ENST00000428730 RBSNQ9H1K0 784 aa20.42■□□□□ 0.86
RHBDF1-204ENST00000428730 GOLGA6L22H0YM25 854 aa20.42■□□□□ 0.86
RHBDF1-204ENST00000428730 NUCB1Q02818 461 aa20.42■□□□□ 0.86
RHBDF1-204ENST00000428730 MCTP1Q6DN14 999 aa20.42■□□□□ 0.86
RHBDF1-204ENST00000428730 PRDM10Q9NQV6 1147 aa20.42■□□□□ 0.86
RHBDF1-204ENST00000428730 IFT140Q96RY7 1462 aa20.42■□□□□ 0.86
RHBDF1-204ENST00000428730 PTMSP20962 102 aa20.41■□□□□ 0.86
RHBDF1-204ENST00000428730 ATF7IPQ6VMQ6 1270 aa20.41■□□□□ 0.86
RHBDF1-204ENST00000428730 PREX2Q70Z35 1606 aa20.4■□□□□ 0.86
RHBDF1-204ENST00000428730 TTC37Q6PGP7 1564 aa20.4■□□□□ 0.86
RHBDF1-204ENST00000428730 U2AF1L5P0DN76 240 aaPredicted RBP20.4■□□□□ 0.86
RHBDF1-204ENST00000428730 U2AF1Q01081 240 aaKnown RBP eCLIP20.4■□□□□ 0.86
RHBDF1-204ENST00000428730 SLC12A5Q9H2X9 1139 aa20.4■□□□□ 0.86
RHBDF1-204ENST00000428730 ARHGAP5Q13017 1502 aa20.4■□□□□ 0.86
RHBDF1-204ENST00000428730 CCDC27Q2M243 656 aa20.4■□□□□ 0.86
RHBDF1-204ENST00000428730 ZSCAN23Q3MJ62 389 aa20.4■□□□□ 0.86
RHBDF1-204ENST00000428730 CHD1LQ86WJ1 897 aa20.4■□□□□ 0.86
RHBDF1-204ENST00000428730 ZBTB40Q9NUA8 1239 aa20.4■□□□□ 0.86
RHBDF1-204ENST00000428730 NOL7Q9UMY1 257 aaKnown RBP20.39■□□□□ 0.85
RHBDF1-204ENST00000428730 PKP1Q13835 747 aa20.39■□□□□ 0.85
RHBDF1-204ENST00000428730 KANK1Q14678 1352 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms