RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 NUP155O75694 1391 aa17.88■□□□□ 0.45
DDX39B-209ENST00000428450 UNC5CLQ8IV45 518 aa17.87■□□□□ 0.45
DDX39B-209ENST00000428450 MARF1Q9Y4F3 1742 aaKnown RBP17.86■□□□□ 0.45
DDX39B-209ENST00000428450 HRCP23327 699 aa17.86■□□□□ 0.45
DDX39B-209ENST00000428450 NPHP3Q7Z494 1330 aa17.86■□□□□ 0.45
DDX39B-209ENST00000428450 PXDNQ92626 1479 aa17.86■□□□□ 0.45
DDX39B-209ENST00000428450 SLIT2O94813 1529 aa17.86■□□□□ 0.45
DDX39B-209ENST00000428450 SF3B2Q13435 895 aaKnown RBP17.85■□□□□ 0.45
DDX39B-209ENST00000428450 NEXMIFQ5QGS0 1516 aa17.85■□□□□ 0.45
DDX39B-209ENST00000428450 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.85■□□□□ 0.45
DDX39B-209ENST00000428450 BRWD3Q6RI45 1802 aa17.84■□□□□ 0.45
DDX39B-209ENST00000428450 PSDA5PKW4 1024 aaPredicted RBP17.84■□□□□ 0.45
DDX39B-209ENST00000428450 PRAG1Q86YV5 1406 aa17.83■□□□□ 0.45
DDX39B-209ENST00000428450 FOXO3O43524 673 aa17.83■□□□□ 0.44
DDX39B-209ENST00000428450 XPCQ01831 940 aaPredicted RBP17.83■□□□□ 0.44
DDX39B-209ENST00000428450 ESCO1Q5FWF5 840 aa17.83■□□□□ 0.44
DDX39B-209ENST00000428450 SEPT12Q8IYM1 358 aa17.83■□□□□ 0.44
DDX39B-209ENST00000428450 SPHKAPQ2M3C7 1700 aa17.82■□□□□ 0.44
DDX39B-209ENST00000428450 ONECUT3O60422 494 aaPredicted RBP17.82■□□□□ 0.44
DDX39B-209ENST00000428450 ROCK1Q13464 1354 aa17.81■□□□□ 0.44
DDX39B-209ENST00000428450 HFM1A2PYH4 1435 aa17.79■□□□□ 0.44
DDX39B-209ENST00000428450 VPS72Q15906 364 aa17.77■□□□□ 0.44
DDX39B-209ENST00000428450 KRT27Q7Z3Y8 459 aa17.77■□□□□ 0.44
DDX39B-209ENST00000428450 SPATA31A3Q5VYP0 1347 aa17.75■□□□□ 0.43
DDX39B-209ENST00000428450 BAG6P46379 1132 aa17.75■□□□□ 0.43
DDX39B-209ENST00000428450 LRPPRCP42704 1394 aaKnown RBP17.75■□□□□ 0.43
DDX39B-209ENST00000428450 CLTCL1P53675 1640 aa17.75■□□□□ 0.43
DDX39B-209ENST00000428450 CDC42BPGQ6DT37 1551 aa17.74■□□□□ 0.43
DDX39B-209ENST00000428450 VGFO15240 615 aaPredicted RBP17.74■□□□□ 0.43
DDX39B-209ENST00000428450 USP32Q8NFA0 1604 aa17.72■□□□□ 0.43
DDX39B-209ENST00000428450 NUTM2FA1L443 756 aa17.71■□□□□ 0.43
DDX39B-209ENST00000428450 EN1Q05925 392 aaPredicted RBP17.71■□□□□ 0.43
DDX39B-209ENST00000428450 R3HDM1Q15032 1099 aaKnown RBP17.7■□□□□ 0.42
DDX39B-209ENST00000428450 NAIPQ13075 1403 aa17.69■□□□□ 0.42
DDX39B-209ENST00000428450 CABLES1Q8TDN4 633 aa17.68■□□□□ 0.42
DDX39B-209ENST00000428450 CCDC9Q9Y3X0 531 aaKnown RBP17.68■□□□□ 0.42
DDX39B-209ENST00000428450 YY1P25490 414 aa17.67■□□□□ 0.42
DDX39B-209ENST00000428450 KRT28Q7Z3Y7 464 aa17.67■□□□□ 0.42
DDX39B-209ENST00000428450 WAPLQ7Z5K2 1190 aa17.67■□□□□ 0.42
DDX39B-209ENST00000428450 KIF1BO60333 1816 aa17.67■□□□□ 0.42
DDX39B-209ENST00000428450 NWD2Q9ULI1 1742 aa17.66■□□□□ 0.42
DDX39B-209ENST00000428450 RPGRIP1LQ68CZ1 1315 aa17.66■□□□□ 0.42
DDX39B-209ENST00000428450 CCDC144AA2RUR9 1427 aa17.65■□□□□ 0.42
DDX39B-209ENST00000428450 FAM83GA6ND36 823 aa17.65■□□□□ 0.42
DDX39B-209ENST00000428450 PLCH1Q4KWH8 1693 aa17.64■□□□□ 0.42
DDX39B-209ENST00000428450 FAM98CQ17RN3 349 aaKnown RBP17.64■□□□□ 0.41
DDX39B-209ENST00000428450 DISP2A7MBM2 1401 aa17.64■□□□□ 0.41
DDX39B-209ENST00000428450 HAP1P54257 671 aaPredicted RBP17.63■□□□□ 0.41
DDX39B-209ENST00000428450 FAM182BQ5T319 152 aa17.63■□□□□ 0.41
DDX39B-209ENST00000428450 TECPR2O15040 1411 aa17.63■□□□□ 0.41
DDX39B-209ENST00000428450 TNS3Q68CZ2 1445 aa17.63■□□□□ 0.41
DDX39B-209ENST00000428450 A0A0G2JS52 829 aa17.62■□□□□ 0.41
DDX39B-209ENST00000428450 ITGAEP38570 1179 aa17.62■□□□□ 0.41
DDX39B-209ENST00000428450 MYT1Q01538 1121 aa17.62■□□□□ 0.41
DDX39B-209ENST00000428450 EZH2Q15910 746 aaKnown RBP17.61■□□□□ 0.41
DDX39B-209ENST00000428450 PLEKHH1Q9ULM0 1364 aa17.61■□□□□ 0.41
DDX39B-209ENST00000428450 PLEKHG5O94827 1062 aa17.6■□□□□ 0.41
DDX39B-209ENST00000428450 STK26Q9P289 416 aa17.6■□□□□ 0.41
DDX39B-209ENST00000428450 KIF1AQ12756 1690 aa17.6■□□□□ 0.41
DDX39B-209ENST00000428450 RGPD1P0DJD0 1748 aa17.6■□□□□ 0.41
DDX39B-209ENST00000428450 PSME1Q06323 249 aa17.59■□□□□ 0.41
DDX39B-209ENST00000428450 CAMKK2Q96RR4 588 aa17.59■□□□□ 0.41
DDX39B-209ENST00000428450 PPLO60437 1756 aa17.58■□□□□ 0.41
DDX39B-209ENST00000428450 FMN2Q9NZ56 1722 aa17.58■□□□□ 0.41
DDX39B-209ENST00000428450 SBNO1A3KN83 1393 aa17.58■□□□□ 0.4
DDX39B-209ENST00000428450 ABCC11Q96J66 1382 aa17.58■□□□□ 0.4
DDX39B-209ENST00000428450 ADGRF5Q8IZF2 1346 aa17.57■□□□□ 0.4
DDX39B-209ENST00000428450 BTG4Q9NY30 223 aa17.57■□□□□ 0.4
DDX39B-209ENST00000428450 PHF8Q9UPP1 1060 aa17.57■□□□□ 0.4
DDX39B-209ENST00000428450 ABCA3Q99758 1704 aa17.56■□□□□ 0.4
DDX39B-209ENST00000428450 NRAPQ86VF7 1730 aa17.55■□□□□ 0.4
DDX39B-209ENST00000428450 TNS1Q9HBL0 1735 aaKnown RBP17.55■□□□□ 0.4
DDX39B-209ENST00000428450 ARHGEF10O15013 1369 aa17.55■□□□□ 0.4
DDX39B-209ENST00000428450 SPATA31A5Q5VU36 1347 aa17.54■□□□□ 0.4
DDX39B-209ENST00000428450 SPATA31A7Q8IWB4 1347 aa17.54■□□□□ 0.4
DDX39B-209ENST00000428450 TMEM132EQ6IEE7 984 aa17.54■□□□□ 0.4
DDX39B-209ENST00000428450 LMOD2Q6P5Q4 547 aa17.54■□□□□ 0.4
DDX39B-209ENST00000428450 NRXN1Q9ULB1 1477 aa17.53■□□□□ 0.4
DDX39B-209ENST00000428450 RGPD8O14715 1765 aaPredicted RBP17.52■□□□□ 0.4
DDX39B-209ENST00000428450 TRIM37O94972 964 aa17.51■□□□□ 0.39
DDX39B-209ENST00000428450 THSD7AQ9UPZ6 1657 aa17.51■□□□□ 0.39
DDX39B-209ENST00000428450 UTRNP46939 3433 aa17.5■□□□□ 0.39
DDX39B-209ENST00000428450 KNDC1Q76NI1 1749 aa17.5■□□□□ 0.39
DDX39B-209ENST00000428450 SIRT1Q96EB6 747 aa17.5■□□□□ 0.39
DDX39B-209ENST00000428450 RRBP1Q9P2E9 1410 aaKnown RBP17.49■□□□□ 0.39
DDX39B-209ENST00000428450 PARD3Q8TEW0 1356 aa17.49■□□□□ 0.39
DDX39B-209ENST00000428450 APBA3O96018 575 aa17.48■□□□□ 0.39
DDX39B-209ENST00000428450 FAM196AQ6ZSG2 479 aa17.48■□□□□ 0.39
DDX39B-209ENST00000428450 YTHDC2Q9H6S0 1430 aaKnown RBP17.47■□□□□ 0.39
DDX39B-209ENST00000428450 ADGRB2O60241 1585 aa17.47■□□□□ 0.39
DDX39B-209ENST00000428450 COL14A1Q05707 1796 aaKnown RBP17.47■□□□□ 0.39
DDX39B-209ENST00000428450 PMFBP1Q8TBY8 1022 aa17.46■□□□□ 0.39
DDX39B-209ENST00000428450 IFT172Q9UG01 1749 aa17.45■□□□□ 0.38
DDX39B-209ENST00000428450 SPON1Q9HCB6 807 aa17.45■□□□□ 0.38
DDX39B-209ENST00000428450 SPATA31A1Q5TZJ5 1347 aa17.45■□□□□ 0.38
DDX39B-209ENST00000428450 RGL3Q3MIN7 710 aa17.44■□□□□ 0.38
DDX39B-209ENST00000428450 RREB1Q92766 1687 aa17.44■□□□□ 0.38
DDX39B-209ENST00000428450 PIK3C2GO75747 1445 aa17.44■□□□□ 0.38
DDX39B-209ENST00000428450 ANKRD30BQ9BXX2 1392 aa17.43■□□□□ 0.38
DDX39B-209ENST00000428450 NINLQ9Y2I6 1382 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms