RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 PRAM1Q96QH2 718 aa22.99■■□□□ 1.27
PRDM5-203ENST00000428209 RNF123Q5XPI4 1314 aa22.99■■□□□ 1.27
PRDM5-203ENST00000428209 PTPRMP28827 1452 aa22.99■■□□□ 1.27
PRDM5-203ENST00000428209 MORC1Q86VD1 984 aa22.97■■□□□ 1.27
PRDM5-203ENST00000428209 SRPK2P78362 688 aaKnown RBP22.97■■□□□ 1.27
PRDM5-203ENST00000428209 MINK1Q8N4C8 1332 aaPredicted RBP22.96■■□□□ 1.27
PRDM5-203ENST00000428209 CDCA7LQ96GN5 454 aa22.96■■□□□ 1.27
PRDM5-203ENST00000428209 TSHZ2Q9NRE2 1034 aa22.96■■□□□ 1.27
PRDM5-203ENST00000428209 CGNL1Q0VF96 1302 aa22.95■■□□□ 1.26
PRDM5-203ENST00000428209 ANKRD36BQ8N2N9 1353 aa22.95■■□□□ 1.26
PRDM5-203ENST00000428209 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.93■■□□□ 1.26
PRDM5-203ENST00000428209 TNNT2P45379 298 aaPredicted RBP22.92■■□□□ 1.26
PRDM5-203ENST00000428209 TNRQ92752 1358 aa22.91■■□□□ 1.26
PRDM5-203ENST00000428209 USP32Q8NFA0 1604 aa22.91■■□□□ 1.26
PRDM5-203ENST00000428209 RCAN3Q9UKA8 241 aa22.91■■□□□ 1.26
PRDM5-203ENST00000428209 NINLQ9Y2I6 1382 aa22.9■■□□□ 1.26
PRDM5-203ENST00000428209 ATAD2Q6PL18 1390 aa22.89■■□□□ 1.26
PRDM5-203ENST00000428209 POLR3AO14802 1390 aaPredicted RBP22.89■■□□□ 1.25
PRDM5-203ENST00000428209 HDGFP51858 240 aaKnown RBP22.88■■□□□ 1.25
PRDM5-203ENST00000428209 B4GALNT3Q6L9W6 998 aa22.87■■□□□ 1.25
PRDM5-203ENST00000428209 CCDC146Q8IYE0 955 aa22.87■■□□□ 1.25
PRDM5-203ENST00000428209 CDK19Q9BWU1 502 aa22.86■■□□□ 1.25
PRDM5-203ENST00000428209 A0A1W2PP64 1363 aa22.86■■□□□ 1.25
PRDM5-203ENST00000428209 NSD2O96028 1365 aa22.86■■□□□ 1.25
PRDM5-203ENST00000428209 PLEKHH1Q9ULM0 1364 aa22.86■■□□□ 1.25
PRDM5-203ENST00000428209 WAPLQ7Z5K2 1190 aa22.85■■□□□ 1.25
PRDM5-203ENST00000428209 SETD1AO15047 1707 aaKnown RBP22.85■■□□□ 1.25
PRDM5-203ENST00000428209 DLC1Q96QB1 1528 aa22.85■■□□□ 1.25
PRDM5-203ENST00000428209 RRP1P56182 461 aaKnown RBP22.85■■□□□ 1.25
PRDM5-203ENST00000428209 TERF2IPQ9NYB0 399 aa22.85■■□□□ 1.25
PRDM5-203ENST00000428209 ABCC11Q96J66 1382 aa22.84■■□□□ 1.25
PRDM5-203ENST00000428209 APAF1O14727 1248 aa22.82■■□□□ 1.24
PRDM5-203ENST00000428209 NRXN3Q9Y4C0 1643 aa22.82■■□□□ 1.24
PRDM5-203ENST00000428209 MTHFSP49914 203 aa22.82■■□□□ 1.24
PRDM5-203ENST00000428209 ZNF521Q96K83 1311 aa22.81■■□□□ 1.24
PRDM5-203ENST00000428209 METP08581 1390 aa22.81■■□□□ 1.24
PRDM5-203ENST00000428209 GOLGA2Q08379 1002 aa22.8■■□□□ 1.24
PRDM5-203ENST00000428209 TMEM2Q9UHN6 1383 aa22.8■■□□□ 1.24
PRDM5-203ENST00000428209 CEBPAP49715 358 aaPredicted RBP22.79■■□□□ 1.24
PRDM5-203ENST00000428209 HDGFL2Q7Z4V5 671 aaPredicted RBP22.79■■□□□ 1.24
PRDM5-203ENST00000428209 CFAP53Q96M91 514 aa22.79■■□□□ 1.24
PRDM5-203ENST00000428209 UBR1Q8IWV7 1749 aa22.79■■□□□ 1.24
PRDM5-203ENST00000428209 CABP1Q9NZU7 370 aa22.79■■□□□ 1.24
PRDM5-203ENST00000428209 CD163L1Q9NR16 1453 aa22.77■■□□□ 1.24
PRDM5-203ENST00000428209 TXNDC2Q86VQ3 553 aa22.76■■□□□ 1.23
PRDM5-203ENST00000428209 GGNBP2Q9H3C7 697 aa22.76■■□□□ 1.23
PRDM5-203ENST00000428209 DUSP27Q5VZP5 1158 aa22.76■■□□□ 1.23
PRDM5-203ENST00000428209 CCDC136Q96JN2 1154 aa22.75■■□□□ 1.23
PRDM5-203ENST00000428209 SHPRHQ149N8 1683 aa22.75■■□□□ 1.23
PRDM5-203ENST00000428209 NGEFQ8N5V2 710 aa22.75■■□□□ 1.23
PRDM5-203ENST00000428209 FYB1O15117 783 aa22.74■■□□□ 1.23
PRDM5-203ENST00000428209 NLRP1Q9C000 1473 aa22.73■■□□□ 1.23
PRDM5-203ENST00000428209 SLFN5Q08AF3 891 aa22.73■■□□□ 1.23
PRDM5-203ENST00000428209 PLPPR3Q6T4P5 718 aa22.73■■□□□ 1.23
PRDM5-203ENST00000428209 WASLO00401 505 aaPredicted RBP22.71■■□□□ 1.23
PRDM5-203ENST00000428209 SIRT1Q96EB6 747 aa22.71■■□□□ 1.23
PRDM5-203ENST00000428209 RUNDC1Q96C34 613 aa22.7■■□□□ 1.22
PRDM5-203ENST00000428209 FAM135BQ49AJ0 1406 aa22.7■■□□□ 1.22
PRDM5-203ENST00000428209 LTKP29376 864 aa22.7■■□□□ 1.22
PRDM5-203ENST00000428209 EXOC6Q8TAG9 804 aa22.7■■□□□ 1.22
PRDM5-203ENST00000428209 TECPR2O15040 1411 aa22.69■■□□□ 1.22
PRDM5-203ENST00000428209 MED14O60244 1454 aa22.69■■□□□ 1.22
PRDM5-203ENST00000428209 PLIN1O60240 522 aa22.69■■□□□ 1.22
PRDM5-203ENST00000428209 C3P01024 1663 aa22.68■■□□□ 1.22
PRDM5-203ENST00000428209 TRMT2AQ8IZ69 625 aaKnown RBP22.68■■□□□ 1.22
PRDM5-203ENST00000428209 KNDC1Q76NI1 1749 aa22.68■■□□□ 1.22
PRDM5-203ENST00000428209 SPINK5Q9NQ38 1064 aaPredicted RBP22.67■■□□□ 1.22
PRDM5-203ENST00000428209 PLEKHG1Q9ULL1 1385 aa22.67■■□□□ 1.22
PRDM5-203ENST00000428209 ADAMTS13Q76LX8 1427 aa22.67■■□□□ 1.22
PRDM5-203ENST00000428209 ATP7BP35670 1465 aa22.67■■□□□ 1.22
PRDM5-203ENST00000428209 E9PSI1 815 aa22.66■■□□□ 1.22
PRDM5-203ENST00000428209 EID1Q9Y6B2 187 aa22.66■■□□□ 1.22
PRDM5-203ENST00000428209 ANKRD26Q9UPS8 1709 aa22.66■■□□□ 1.22
PRDM5-203ENST00000428209 FER1L4A9Z1Z3 1794 aa22.66■■□□□ 1.22
PRDM5-203ENST00000428209 U2AF1L5P0DN76 240 aaPredicted RBP22.65■■□□□ 1.22
PRDM5-203ENST00000428209 U2AF1Q01081 240 aaKnown RBP eCLIP22.65■■□□□ 1.22
PRDM5-203ENST00000428209 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.65■■□□□ 1.22
PRDM5-203ENST00000428209 CPS1P31327 1500 aa22.65■■□□□ 1.22
PRDM5-203ENST00000428209 NEUROD2Q15784 382 aa22.65■■□□□ 1.22
PRDM5-203ENST00000428209 WWC1Q8IX03 1113 aa22.65■■□□□ 1.22
PRDM5-203ENST00000428209 TCP11L2Q8N4U5 519 aa22.65■■□□□ 1.22
PRDM5-203ENST00000428209 RBM19Q9Y4C8 960 aaKnown RBP22.64■■□□□ 1.22
PRDM5-203ENST00000428209 PPIP5K1Q6PFW1 1433 aa22.64■■□□□ 1.21
PRDM5-203ENST00000428209 NUDT16Q96DE0 195 aaKnown RBP22.63■■□□□ 1.21
PRDM5-203ENST00000428209 RRP7AQ9Y3A4 280 aaKnown RBP22.63■■□□□ 1.21
PRDM5-203ENST00000428209 DMRT2Q9Y5R5 561 aa22.63■■□□□ 1.21
PRDM5-203ENST00000428209 KIF20BQ96Q89 1820 aa22.62■■□□□ 1.21
PRDM5-203ENST00000428209 ROBO2Q9HCK4 1378 aa22.62■■□□□ 1.21
PRDM5-203ENST00000428209 NKTRP30414 1462 aaKnown RBP22.61■■□□□ 1.21
PRDM5-203ENST00000428209 SLC26A8Q96RN1 970 aa22.61■■□□□ 1.21
PRDM5-203ENST00000428209 CCDC61Q9Y6R9 512 aa22.61■■□□□ 1.21
PRDM5-203ENST00000428209 IQSEC2Q5JU85 1478 aa22.6■■□□□ 1.21
PRDM5-203ENST00000428209 CPSF1Q10570 1443 aaKnown RBP22.6■■□□□ 1.21
PRDM5-203ENST00000428209 U2SURPO15042 1029 aaKnown RBP22.59■■□□□ 1.21
PRDM5-203ENST00000428209 THEMISQ8N1K5 641 aaPredicted RBP22.59■■□□□ 1.21
PRDM5-203ENST00000428209 NCKAP5LQ9HCH0 1330 aa22.59■■□□□ 1.21
PRDM5-203ENST00000428209 SLIT1O75093 1534 aa22.58■■□□□ 1.2
PRDM5-203ENST00000428209 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.57■■□□□ 1.2
PRDM5-203ENST00000428209 CRBNQ96SW2 442 aa22.57■■□□□ 1.2
PRDM5-203ENST00000428209 EDC4Q6P2E9 1401 aaKnown RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms