RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 NISCHQ9Y2I1 1504 aa37.68■■■■□ 3.62
PRDM5-203ENST00000428209 CCDC180Q9P1Z9 1646 aa32.48■■■□□ 2.79
PRDM5-203ENST00000428209 ZCCHC6Q5VYS8 1495 aaKnown RBP31.74■■■□□ 2.67
PRDM5-203ENST00000428209 SHROOM4Q9ULL8 1493 aa31.37■■■□□ 2.61
PRDM5-203ENST00000428209 DCAF8L2P0C7V8 631 aa31.26■■■□□ 2.59
PRDM5-203ENST00000428209 DCAF1Q9Y4B6 1507 aa31.04■■■□□ 2.56
PRDM5-203ENST00000428209 ABCC9O60706 1549 aa30.48■■■□□ 2.47
PRDM5-203ENST00000428209 SUPT5HO00267 1087 aaKnown RBP30.47■■■□□ 2.47
PRDM5-203ENST00000428209 MYO15BQ96JP2 1530 aa30.45■■■□□ 2.46
PRDM5-203ENST00000428209 NACADO15069 1562 aa30.18■■■□□ 2.42
PRDM5-203ENST00000428209 SCRIBQ14160 1630 aa30.13■■■□□ 2.41
PRDM5-203ENST00000428209 RB1CC1Q8TDY2 1594 aa29.82■■■□□ 2.36
PRDM5-203ENST00000428209 RSF1Q96T23 1441 aaPredicted RBP29.49■■■□□ 2.31
PRDM5-203ENST00000428209 CHIC1Q5VXU3 224 aa29.36■■■□□ 2.29
PRDM5-203ENST00000428209 CECR2Q9BXF3 1484 aa29.33■■■□□ 2.29
PRDM5-203ENST00000428209 UNC13AQ9UPW8 1703 aa29.27■■■□□ 2.28
PRDM5-203ENST00000428209 MROH2BQ7Z745 1585 aa29.19■■■□□ 2.26
PRDM5-203ENST00000428209 BAZ1AQ9NRL2 1556 aaPredicted RBP29.04■■■□□ 2.24
PRDM5-203ENST00000428209 WIZO95785 1651 aa28.99■■■□□ 2.23
PRDM5-203ENST00000428209 PABPN1Q86U42 306 aaKnown RBP eCLIP28.94■■■□□ 2.22
PRDM5-203ENST00000428209 BICRAQ9NZM4 1560 aa28.94■■■□□ 2.22
PRDM5-203ENST00000428209 SMARCA4P51532 1647 aa28.85■■■□□ 2.21
PRDM5-203ENST00000428209 TOP2AP11388 1531 aaKnown RBP28.61■■■□□ 2.17
PRDM5-203ENST00000428209 TRIM41Q8WV44 630 aa28.54■■■□□ 2.16
PRDM5-203ENST00000428209 CCDC88BA6NC98 1476 aa28.42■■■□□ 2.14
PRDM5-203ENST00000428209 SMARCA2P51531 1590 aa28.39■■■□□ 2.14
PRDM5-203ENST00000428209 PEG3Q9GZU2 1588 aa28.39■■■□□ 2.14
PRDM5-203ENST00000428209 LOC105371045A0A1W2PR82 267 aa28.36■■■□□ 2.13
PRDM5-203ENST00000428209 EIF4G1Q04637 1599 aaKnown RBP28.32■■■□□ 2.12
PRDM5-203ENST00000428209 ATAD2BQ9ULI0 1458 aa28.27■■■□□ 2.12
PRDM5-203ENST00000428209 BAZ1BQ9UIG0 1483 aaKnown RBP28.15■■■□□ 2.1
PRDM5-203ENST00000428209 FAM9AQ8IZU1 332 aaPredicted RBP28.14■■■□□ 2.1
PRDM5-203ENST00000428209 ABCC8Q09428 1581 aa28.04■■■□□ 2.08
PRDM5-203ENST00000428209 NCAPD3P42695 1498 aa27.89■■■□□ 2.06
PRDM5-203ENST00000428209 HMGXB3Q12766 1538 aa27.85■■■□□ 2.05
PRDM5-203ENST00000428209 EHMT2Q96KQ7 1210 aa27.81■■■□□ 2.04
PRDM5-203ENST00000428209 WRNQ14191 1432 aaPredicted RBP eCLIP27.75■■■□□ 2.03
PRDM5-203ENST00000428209 PCGF6Q9BYE7 350 aa27.64■■■□□ 2.02
PRDM5-203ENST00000428209 SOGA1O94964 1423 aa27.64■■■□□ 2.02
PRDM5-203ENST00000428209 CC2D2AQ9P2K1 1620 aa27.6■■■□□ 2.01
PRDM5-203ENST00000428209 SYNJ1O43426 1573 aa27.59■■■□□ 2.01
PRDM5-203ENST00000428209 EEA1Q15075 1411 aa27.57■■■□□ 2
PRDM5-203ENST00000428209 RUSC2Q8N2Y8 1516 aa27.51■■■□□ 2
PRDM5-203ENST00000428209 CSRNP3Q8WYN3 585 aa27.5■■□□□ 1.99
PRDM5-203ENST00000428209 CFTRP13569 1480 aa27.44■■□□□ 1.98
PRDM5-203ENST00000428209 TRIM26Q12899 539 aaPredicted RBP27.41■■□□□ 1.98
PRDM5-203ENST00000428209 TOP2BQ02880 1626 aa27.4■■□□□ 1.98
PRDM5-203ENST00000428209 DNAJC5BQ9UF47 199 aa27.35■■□□□ 1.97
PRDM5-203ENST00000428209 BIVM-ERCC5R4GMW8 1640 aa27.33■■□□□ 1.97
PRDM5-203ENST00000428209 TNIKQ9UKE5 1360 aa27.29■■□□□ 1.96
PRDM5-203ENST00000428209 UBTFP17480 764 aaKnown RBP27.28■■□□□ 1.96
PRDM5-203ENST00000428209 CADPSQ9ULU8 1353 aa27.28■■□□□ 1.96
PRDM5-203ENST00000428209 GOLGA3Q08378 1498 aa27.26■■□□□ 1.95
PRDM5-203ENST00000428209 PRDM2Q13029 1718 aa27.24■■□□□ 1.95
PRDM5-203ENST00000428209 CUX1P39880 1505 aa27.24■■□□□ 1.95
PRDM5-203ENST00000428209 CEP162Q5TB80 1403 aa27.22■■□□□ 1.95
PRDM5-203ENST00000428209 CEP164Q9UPV0 1460 aa27.2■■□□□ 1.95
PRDM5-203ENST00000428209 HRCP23327 699 aa27.2■■□□□ 1.94
PRDM5-203ENST00000428209 KIF21BO75037 1637 aa27.17■■□□□ 1.94
PRDM5-203ENST00000428209 PPARGC1BQ86YN6 1023 aaKnown RBP27.05■■□□□ 1.92
PRDM5-203ENST00000428209 RAPGEF2Q9Y4G8 1499 aa27.03■■□□□ 1.92
PRDM5-203ENST00000428209 KIF27Q86VH2 1401 aa26.99■■□□□ 1.91
PRDM5-203ENST00000428209 FANCD2Q9BXW9 1451 aa26.98■■□□□ 1.91
PRDM5-203ENST00000428209 NESP48681 1621 aa26.93■■□□□ 1.9
PRDM5-203ENST00000428209 PRXQ9BXM0 1461 aa26.92■■□□□ 1.9
PRDM5-203ENST00000428209 CLIP1P30622 1438 aa26.89■■□□□ 1.9
PRDM5-203ENST00000428209 ERICH3Q5RHP9 1530 aa26.89■■□□□ 1.89
PRDM5-203ENST00000428209 FGD5Q6ZNL6 1462 aa26.87■■□□□ 1.89
PRDM5-203ENST00000428209 LAMC3Q9Y6N6 1575 aa26.84■■□□□ 1.89
PRDM5-203ENST00000428209 CUX2O14529 1486 aa26.83■■□□□ 1.89
PRDM5-203ENST00000428209 RANGAP1P46060 587 aaPredicted RBP26.78■■□□□ 1.88
PRDM5-203ENST00000428209 DNMBPQ6XZF7 1577 aa26.77■■□□□ 1.88
PRDM5-203ENST00000428209 TTBK1Q5TCY1 1321 aaPredicted RBP26.75■■□□□ 1.87
PRDM5-203ENST00000428209 TOPBP1Q92547 1522 aa26.73■■□□□ 1.87
PRDM5-203ENST00000428209 IGF1RP08069 1367 aa26.72■■□□□ 1.87
PRDM5-203ENST00000428209 VPS8Q8N3P4 1428 aa26.7■■□□□ 1.87
PRDM5-203ENST00000428209 PDS5BQ9NTI5 1447 aa26.67■■□□□ 1.86
PRDM5-203ENST00000428209 POLA1P09884 1462 aaPredicted RBP26.65■■□□□ 1.86
PRDM5-203ENST00000428209 RAD54L2Q9Y4B4 1467 aa26.64■■□□□ 1.85
PRDM5-203ENST00000428209 CARMIL1Q5VZK9 1371 aa26.61■■□□□ 1.85
PRDM5-203ENST00000428209 URB2Q14146 1524 aaKnown RBP26.61■■□□□ 1.85
PRDM5-203ENST00000428209 ABCA10Q8WWZ4 1543 aa26.59■■□□□ 1.85
PRDM5-203ENST00000428209 APLP2Q06481 763 aa26.57■■□□□ 1.84
PRDM5-203ENST00000428209 ZEB1P37275 1124 aaPredicted RBP26.55■■□□□ 1.84
PRDM5-203ENST00000428209 KIF21AQ7Z4S6 1674 aa26.52■■□□□ 1.84
PRDM5-203ENST00000428209 ARAP1Q96P48 1450 aa26.52■■□□□ 1.84
PRDM5-203ENST00000428209 ARHGAP35Q9NRY4 1499 aa26.43■■□□□ 1.82
PRDM5-203ENST00000428209 WDR97A6NE52 1622 aa26.4■■□□□ 1.82
PRDM5-203ENST00000428209 TDRD9Q8NDG6 1382 aaKnown RBP26.36■■□□□ 1.81
PRDM5-203ENST00000428209 CUL7Q14999 1698 aa26.36■■□□□ 1.81
PRDM5-203ENST00000428209 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.35■■□□□ 1.81
PRDM5-203ENST00000428209 ABCA5Q8WWZ7 1642 aa26.31■■□□□ 1.8
PRDM5-203ENST00000428209 GAPVD1Q14C86 1478 aa26.3■■□□□ 1.8
PRDM5-203ENST00000428209 CCER1Q8TC90 406 aaPredicted RBP26.3■■□□□ 1.8
PRDM5-203ENST00000428209 MRC2Q9UBG0 1479 aa26.28■■□□□ 1.8
PRDM5-203ENST00000428209 TARBP1Q13395 1621 aaKnown RBP26.25■■□□□ 1.79
PRDM5-203ENST00000428209 KANK4Q5T7N3 995 aaPredicted RBP26.23■■□□□ 1.79
PRDM5-203ENST00000428209 ERCC6Q03468 1493 aa26.21■■□□□ 1.79
PRDM5-203ENST00000428209 HNRNPUL2Q1KMD3 747 aaKnown RBP26.17■■□□□ 1.78
PRDM5-203ENST00000428209 CTTNBP2Q8WZ74 1663 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 255.6 ms