RNA–Protein interactions for RNA: ENST00000417709.5

TTC38-202, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-202ENST00000417709 STK26Q9P289 416 aa21.46■■□□□ 1.03
TTC38-202ENST00000417709 PTCH1Q13635 1447 aa21.46■■□□□ 1.03
TTC38-202ENST00000417709 FOXD1Q16676 465 aa21.45■■□□□ 1.02
TTC38-202ENST00000417709 SLC4A1APQ9BWU0 796 aaKnown RBP21.45■■□□□ 1.02
TTC38-202ENST00000417709 LAMC1P11047 1609 aa21.44■■□□□ 1.02
TTC38-202ENST00000417709 WAPLQ7Z5K2 1190 aa21.43■■□□□ 1.02
TTC38-202ENST00000417709 NPHP3Q7Z494 1330 aa21.43■■□□□ 1.02
TTC38-202ENST00000417709 ATRNO75882 1429 aa21.43■■□□□ 1.02
TTC38-202ENST00000417709 GJD4Q96KN9 370 aaPredicted RBP21.42■■□□□ 1.02
TTC38-202ENST00000417709 HFM1A2PYH4 1435 aa21.41■■□□□ 1.02
TTC38-202ENST00000417709 NAIPQ13075 1403 aa21.41■■□□□ 1.02
TTC38-202ENST00000417709 CCDC125Q86Z20 511 aa21.41■■□□□ 1.02
TTC38-202ENST00000417709 RGL3Q3MIN7 710 aa21.4■■□□□ 1.02
TTC38-202ENST00000417709 BCL9LQ86UU0 1499 aa21.39■■□□□ 1.02
TTC38-202ENST00000417709 ADGRF5Q8IZF2 1346 aa21.37■■□□□ 1.01
TTC38-202ENST00000417709 TMEM132EQ6IEE7 984 aa21.37■■□□□ 1.01
TTC38-202ENST00000417709 PLEKHG5O94827 1062 aa21.36■■□□□ 1.01
TTC38-202ENST00000417709 MYOM2P54296 1465 aa21.35■■□□□ 1.01
TTC38-202ENST00000417709 UNC5CLQ8IV45 518 aa21.35■■□□□ 1.01
TTC38-202ENST00000417709 COL22A1Q8NFW1 1626 aaPredicted RBP21.35■■□□□ 1.01
TTC38-202ENST00000417709 PPLO60437 1756 aa21.34■■□□□ 1.01
TTC38-202ENST00000417709 LRPPRCP42704 1394 aaKnown RBP21.34■■□□□ 1.01
TTC38-202ENST00000417709 PXDNQ92626 1479 aa21.33■■□□□ 1.01
TTC38-202ENST00000417709 KRT28Q7Z3Y7 464 aa21.33■■□□□ 1.01
TTC38-202ENST00000417709 MARF1Q9Y4F3 1742 aaKnown RBP21.32■■□□□ 1
TTC38-202ENST00000417709 PRAG1Q86YV5 1406 aa21.31■■□□□ 1
TTC38-202ENST00000417709 HAP1P54257 671 aaPredicted RBP21.3■■□□□ 1
TTC38-202ENST00000417709 SPATA31A3Q5VYP0 1347 aa21.29■■□□□ 1
TTC38-202ENST00000417709 PLEKHH1Q9ULM0 1364 aa21.29■■□□□ 1
TTC38-202ENST00000417709 DEFB132Q7Z7B7 95 aa21.29■■□□□ 1
TTC38-202ENST00000417709 CABLES1Q8TDN4 633 aa21.29■■□□□ 1
TTC38-202ENST00000417709 RRBP1Q9P2E9 1410 aaKnown RBP21.29■■□□□ 1
TTC38-202ENST00000417709 CDC42BPGQ6DT37 1551 aa21.27■■□□□ 1
TTC38-202ENST00000417709 LMOD2Q6P5Q4 547 aa21.27■■□□□ 1
TTC38-202ENST00000417709 SEPT12Q8IYM1 358 aa21.27■■□□□ 1
TTC38-202ENST00000417709 CCDC9Q9Y3X0 531 aaKnown RBP21.27■■□□□ 1
TTC38-202ENST00000417709 RALGAPBQ86X10 1494 aa21.26■□□□□ 0.99
TTC38-202ENST00000417709 ABCC11Q96J66 1382 aa21.25■□□□□ 0.99
TTC38-202ENST00000417709 SF3B2Q13435 895 aaKnown RBP21.25■□□□□ 0.99
TTC38-202ENST00000417709 PSME1Q06323 249 aa21.24■□□□□ 0.99
TTC38-202ENST00000417709 PHF8Q9UPP1 1060 aa21.24■□□□□ 0.99
TTC38-202ENST00000417709 BRWD3Q6RI45 1802 aa21.23■□□□□ 0.99
TTC38-202ENST00000417709 CCDC144AA2RUR9 1427 aa21.22■□□□□ 0.99
TTC38-202ENST00000417709 BLMP54132 1417 aaPredicted RBP21.22■□□□□ 0.99
TTC38-202ENST00000417709 SAFB2Q14151 953 aaKnown RBP eCLIP21.22■□□□□ 0.99
TTC38-202ENST00000417709 MPHOSPH9Q99550 1183 aa21.22■□□□□ 0.99
TTC38-202ENST00000417709 SLIT2O94813 1529 aa21.22■□□□□ 0.99
TTC38-202ENST00000417709 GLI3P10071 1580 aa21.22■□□□□ 0.99
TTC38-202ENST00000417709 ANKRD30BQ9BXX2 1392 aa21.22■□□□□ 0.99
TTC38-202ENST00000417709 RGPD8O14715 1765 aaPredicted RBP21.21■□□□□ 0.99
TTC38-202ENST00000417709 VPS72Q15906 364 aa21.21■□□□□ 0.99
TTC38-202ENST00000417709 TECPR2O15040 1411 aa21.2■□□□□ 0.98
TTC38-202ENST00000417709 SIRT1Q96EB6 747 aa21.19■□□□□ 0.98
TTC38-202ENST00000417709 YTHDC2Q9H6S0 1430 aaKnown RBP21.19■□□□□ 0.98
TTC38-202ENST00000417709 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.18■□□□□ 0.98
TTC38-202ENST00000417709 A0A0G2JS52 829 aa21.18■□□□□ 0.98
TTC38-202ENST00000417709 FAM83GA6ND36 823 aa21.18■□□□□ 0.98
TTC38-202ENST00000417709 ONECUT3O60422 494 aaPredicted RBP21.18■□□□□ 0.98
TTC38-202ENST00000417709 MYT1Q01538 1121 aa21.18■□□□□ 0.98
TTC38-202ENST00000417709 KRT27Q7Z3Y8 459 aa21.18■□□□□ 0.98
TTC38-202ENST00000417709 SPATA31E1Q6ZUB1 1445 aa21.18■□□□□ 0.98
TTC38-202ENST00000417709 FMN2Q9NZ56 1722 aa21.18■□□□□ 0.98
TTC38-202ENST00000417709 CFAP70Q5T0N1 1121 aa21.17■□□□□ 0.98
TTC38-202ENST00000417709 PMFBP1Q8TBY8 1022 aa21.17■□□□□ 0.98
TTC38-202ENST00000417709 C14orf93Q9H972 538 aaKnown RBP21.17■□□□□ 0.98
TTC38-202ENST00000417709 PRAM1Q96QH2 718 aa21.15■□□□□ 0.98
TTC38-202ENST00000417709 PSDA5PKW4 1024 aaPredicted RBP21.14■□□□□ 0.97
TTC38-202ENST00000417709 POGKQ9P215 609 aa21.14■□□□□ 0.97
TTC38-202ENST00000417709 USP32Q8NFA0 1604 aa21.14■□□□□ 0.97
TTC38-202ENST00000417709 DHX57Q6P158 1386 aaKnown RBP21.13■□□□□ 0.97
TTC38-202ENST00000417709 KIF1AQ12756 1690 aa21.13■□□□□ 0.97
TTC38-202ENST00000417709 TNS3Q68CZ2 1445 aa21.12■□□□□ 0.97
TTC38-202ENST00000417709 FAM98CQ17RN3 349 aaKnown RBP21.12■□□□□ 0.97
TTC38-202ENST00000417709 PIK3C2GO75747 1445 aa21.12■□□□□ 0.97
TTC38-202ENST00000417709 IFT172Q9UG01 1749 aa21.11■□□□□ 0.97
TTC38-202ENST00000417709 KNDC1Q76NI1 1749 aa21.1■□□□□ 0.97
TTC38-202ENST00000417709 BTG4Q9NY30 223 aa21.1■□□□□ 0.97
TTC38-202ENST00000417709 SBNO1A3KN83 1393 aa21.1■□□□□ 0.97
TTC38-202ENST00000417709 BAG6P46379 1132 aa21.09■□□□□ 0.97
TTC38-202ENST00000417709 FAM182BQ5T319 152 aa21.09■□□□□ 0.97
TTC38-202ENST00000417709 HIRIP3Q9BW71 556 aaPredicted RBP21.08■□□□□ 0.97
TTC38-202ENST00000417709 ARHGEF10O15013 1369 aa21.08■□□□□ 0.96
TTC38-202ENST00000417709 EN1Q05925 392 aaPredicted RBP21.07■□□□□ 0.96
TTC38-202ENST00000417709 PLCH1Q4KWH8 1693 aa21.07■□□□□ 0.96
TTC38-202ENST00000417709 NWD2Q9ULI1 1742 aa21.06■□□□□ 0.96
TTC38-202ENST00000417709 NRXN1Q9ULB1 1477 aa21.06■□□□□ 0.96
TTC38-202ENST00000417709 HRCP23327 699 aa21.05■□□□□ 0.96
TTC38-202ENST00000417709 TRAK1Q9UPV9 953 aa21.04■□□□□ 0.96
TTC38-202ENST00000417709 PAK3O75914 559 aaPredicted RBP21.03■□□□□ 0.96
TTC38-202ENST00000417709 MINK1Q8N4C8 1332 aaPredicted RBP21.03■□□□□ 0.96
TTC38-202ENST00000417709 GPRASP1Q5JY77 1395 aa21.01■□□□□ 0.95
TTC38-202ENST00000417709 KDM2AQ9Y2K7 1162 aa21.01■□□□□ 0.95
TTC38-202ENST00000417709 R3HDM1Q15032 1099 aaKnown RBP21■□□□□ 0.95
TTC38-202ENST00000417709 NGDNQ8NEJ9 315 aaKnown RBP21■□□□□ 0.95
TTC38-202ENST00000417709 ABCA3Q99758 1704 aa20.99■□□□□ 0.95
TTC38-202ENST00000417709 SPATA31A5Q5VU36 1347 aa20.99■□□□□ 0.95
TTC38-202ENST00000417709 SPATA31A7Q8IWB4 1347 aa20.99■□□□□ 0.95
TTC38-202ENST00000417709 PRR36Q9H6K5 1346 aa20.97■□□□□ 0.95
TTC38-202ENST00000417709 ACIN1Q9UKV3 1341 aaKnown RBP20.97■□□□□ 0.95
TTC38-202ENST00000417709 ANKARQ7Z5J8 1434 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms