RNA–Protein interactions for RNA: ENST00000416321.5

DEPDC4-203, Transcript of DEP domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DEPDC4, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-203ENST00000416321 SLC4A2P04920 1241 aa14.02□□□□□ -0.17
DEPDC4-203ENST00000416321 PRAM1Q96QH2 718 aa14.02□□□□□ -0.17
DEPDC4-203ENST00000416321 SLC26A8Q96RN1 970 aa14.02□□□□□ -0.17
DEPDC4-203ENST00000416321 TBX22Q9Y458 520 aa14.02□□□□□ -0.17
DEPDC4-203ENST00000416321 EVC2Q86UK5 1308 aa14.01□□□□□ -0.17
DEPDC4-203ENST00000416321 SAFB2Q14151 953 aaKnown RBP eCLIP14.01□□□□□ -0.17
DEPDC4-203ENST00000416321 MED14O60244 1454 aa13.99□□□□□ -0.17
DEPDC4-203ENST00000416321 NPHP4O75161 1426 aaPredicted RBP13.99□□□□□ -0.17
DEPDC4-203ENST00000416321 MIER1Q8N108 512 aa13.99□□□□□ -0.17
DEPDC4-203ENST00000416321 CPS1P31327 1500 aa13.99□□□□□ -0.17
DEPDC4-203ENST00000416321 TECPR2O15040 1411 aa13.98□□□□□ -0.17
DEPDC4-203ENST00000416321 FAM135BQ49AJ0 1406 aa13.98□□□□□ -0.17
DEPDC4-203ENST00000416321 PIK3R4Q99570 1358 aa13.98□□□□□ -0.17
DEPDC4-203ENST00000416321 SIRT1Q96EB6 747 aa13.98□□□□□ -0.17
DEPDC4-203ENST00000416321 MINK1Q8N4C8 1332 aaPredicted RBP13.97□□□□□ -0.17
DEPDC4-203ENST00000416321 AMOTL2Q9Y2J4 779 aa13.96□□□□□ -0.17
DEPDC4-203ENST00000416321 NCKAP5LQ9HCH0 1330 aa13.95□□□□□ -0.18
DEPDC4-203ENST00000416321 SRPK2P78362 688 aaKnown RBP13.95□□□□□ -0.18
DEPDC4-203ENST00000416321 FOXD4L1Q9NU39 408 aa13.95□□□□□ -0.18
DEPDC4-203ENST00000416321 TULP4Q9NRJ4 1543 aa13.95□□□□□ -0.18
DEPDC4-203ENST00000416321 PTCH1Q13635 1447 aa13.94□□□□□ -0.18
DEPDC4-203ENST00000416321 WAPLQ7Z5K2 1190 aa13.94□□□□□ -0.18
DEPDC4-203ENST00000416321 PUS7Q96PZ0 661 aaKnown RBP13.94□□□□□ -0.18
DEPDC4-203ENST00000416321 PLEKHH1Q9ULM0 1364 aa13.94□□□□□ -0.18
DEPDC4-203ENST00000416321 PTPRUQ92729 1446 aa13.93□□□□□ -0.18
DEPDC4-203ENST00000416321 TMC1Q8TDI8 760 aa13.93□□□□□ -0.18
DEPDC4-203ENST00000416321 PANK3Q9H999 370 aa13.93□□□□□ -0.18
DEPDC4-203ENST00000416321 ATAD2Q6PL18 1390 aa13.93□□□□□ -0.18
DEPDC4-203ENST00000416321 ROBO2Q9HCK4 1378 aa13.93□□□□□ -0.18
DEPDC4-203ENST00000416321 XRN1Q8IZH2 1706 aaKnown RBP13.93□□□□□ -0.18
DEPDC4-203ENST00000416321 HSPA2P54652 639 aa13.92□□□□□ -0.18
DEPDC4-203ENST00000416321 LMTK3Q96Q04 1460 aa13.92□□□□□ -0.18
DEPDC4-203ENST00000416321 CABP2Q9NPB3 220 aa13.91□□□□□ -0.18
DEPDC4-203ENST00000416321 MYOM1P52179 1685 aa13.91□□□□□ -0.18
DEPDC4-203ENST00000416321 CDK19Q9BWU1 502 aa13.9□□□□□ -0.18
DEPDC4-203ENST00000416321 NINLQ9Y2I6 1382 aa13.9□□□□□ -0.18
DEPDC4-203ENST00000416321 CHD2O14647 1828 aaKnown RBP13.9□□□□□ -0.18
DEPDC4-203ENST00000416321 KNSTRNQ9Y448 316 aa13.89□□□□□ -0.19
DEPDC4-203ENST00000416321 WASLO00401 505 aaPredicted RBP13.88□□□□□ -0.19
DEPDC4-203ENST00000416321 KCNA6P17658 529 aa13.88□□□□□ -0.19
DEPDC4-203ENST00000416321 CNGB1Q14028 1251 aaPredicted RBP13.88□□□□□ -0.19
DEPDC4-203ENST00000416321 ADGRB2O60241 1585 aa13.88□□□□□ -0.19
DEPDC4-203ENST00000416321 KTN1Q86UP2 1357 aaKnown RBP13.87□□□□□ -0.19
DEPDC4-203ENST00000416321 CCER2I3L3R5 266 aa13.86□□□□□ -0.19
DEPDC4-203ENST00000416321 PRKRIP1Q9H875 184 aaPredicted RBP13.86□□□□□ -0.19
DEPDC4-203ENST00000416321 U3KPZ7 1027 aaPredicted RBP13.86□□□□□ -0.19
DEPDC4-203ENST00000416321 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.85□□□□□ -0.19
DEPDC4-203ENST00000416321 NWD1Q149M9 1564 aa13.85□□□□□ -0.19
DEPDC4-203ENST00000416321 HDGFL2Q7Z4V5 671 aaPredicted RBP13.85□□□□□ -0.19
DEPDC4-203ENST00000416321 C14orf37Q86TY3 774 aa13.85□□□□□ -0.19
DEPDC4-203ENST00000416321 SLC12A5Q9H2X9 1139 aa13.85□□□□□ -0.19
DEPDC4-203ENST00000416321 TERF2IPQ9NYB0 399 aa13.85□□□□□ -0.19
DEPDC4-203ENST00000416321 ANKRD36BQ8N2N9 1353 aa13.84□□□□□ -0.19
DEPDC4-203ENST00000416321 RALBP1Q15311 655 aa13.84□□□□□ -0.19
DEPDC4-203ENST00000416321 NKTRP30414 1462 aaKnown RBP13.83□□□□□ -0.2
DEPDC4-203ENST00000416321 PER1O15534 1290 aaPredicted RBP13.83□□□□□ -0.2
DEPDC4-203ENST00000416321 CC2D1BQ5T0F9 858 aaKnown RBP13.83□□□□□ -0.2
DEPDC4-203ENST00000416321 MYCNP04198 464 aaPredicted RBP13.82□□□□□ -0.2
DEPDC4-203ENST00000416321 NUDT16Q96DE0 195 aaKnown RBP13.82□□□□□ -0.2
DEPDC4-203ENST00000416321 PPIP5K1Q6PFW1 1433 aa13.81□□□□□ -0.2
DEPDC4-203ENST00000416321 NSD3Q9BZ95 1437 aa13.81□□□□□ -0.2
DEPDC4-203ENST00000416321 PROSER2Q86WR7 435 aaPredicted RBP13.81□□□□□ -0.2
DEPDC4-203ENST00000416321 CCDC61Q9Y6R9 512 aa13.81□□□□□ -0.2
DEPDC4-203ENST00000416321 STRCQ7RTU9 1775 aa13.81□□□□□ -0.2
DEPDC4-203ENST00000416321 ATP7BP35670 1465 aa13.8□□□□□ -0.2
DEPDC4-203ENST00000416321 CABP1Q9NZU7 370 aa13.8□□□□□ -0.2
DEPDC4-203ENST00000416321 CGNL1Q0VF96 1302 aa13.8□□□□□ -0.2
DEPDC4-203ENST00000416321 ADGRL3Q9HAR2 1447 aa13.8□□□□□ -0.2
DEPDC4-203ENST00000416321 ITSN1Q15811 1721 aa13.79□□□□□ -0.2
DEPDC4-203ENST00000416321 MYBBP1AQ9BQG0 1328 aaKnown RBP13.79□□□□□ -0.2
DEPDC4-203ENST00000416321 A0A1W2PP64 1363 aa13.79□□□□□ -0.2
DEPDC4-203ENST00000416321 NPC1L1Q9UHC9 1359 aa13.79□□□□□ -0.2
DEPDC4-203ENST00000416321 CDC42BPGQ6DT37 1551 aa13.79□□□□□ -0.2
DEPDC4-203ENST00000416321 NALCNQ8IZF0 1738 aa13.78□□□□□ -0.2
DEPDC4-203ENST00000416321 NUTM2FA1L443 756 aa13.78□□□□□ -0.2
DEPDC4-203ENST00000416321 ZBTB22O15209 634 aa13.78□□□□□ -0.2
DEPDC4-203ENST00000416321 MRS2Q9HD23 443 aa13.78□□□□□ -0.2
DEPDC4-203ENST00000416321 PARD3Q8TEW0 1356 aa13.78□□□□□ -0.2
DEPDC4-203ENST00000416321 ANKARQ7Z5J8 1434 aa13.78□□□□□ -0.2
DEPDC4-203ENST00000416321 USP32Q8NFA0 1604 aa13.78□□□□□ -0.2
DEPDC4-203ENST00000416321 AMER1Q5JTC6 1135 aaPredicted RBP13.77□□□□□ -0.21
DEPDC4-203ENST00000416321 CARD14Q9BXL6 1004 aa13.77□□□□□ -0.21
DEPDC4-203ENST00000416321 FMN2Q9NZ56 1722 aa13.77□□□□□ -0.21
DEPDC4-203ENST00000416321 NSD2O96028 1365 aa13.76□□□□□ -0.21
DEPDC4-203ENST00000416321 PRR36Q9H6K5 1346 aa13.76□□□□□ -0.21
DEPDC4-203ENST00000416321 RBM33Q96EV2 1170 aaKnown RBP13.76□□□□□ -0.21
DEPDC4-203ENST00000416321 YTHDC1Q96MU7 727 aaKnown RBP13.76□□□□□ -0.21
DEPDC4-203ENST00000416321 TOPAZ1Q8N9V7 1692 aa13.75□□□□□ -0.21
DEPDC4-203ENST00000416321 NLRP13Q86W25 1043 aa13.75□□□□□ -0.21
DEPDC4-203ENST00000416321 CD163L1Q9NR16 1453 aa13.74□□□□□ -0.21
DEPDC4-203ENST00000416321 SAMD1Q6SPF0 538 aaPredicted RBP13.74□□□□□ -0.21
DEPDC4-203ENST00000416321 MORC1Q86VD1 984 aa13.74□□□□□ -0.21
DEPDC4-203ENST00000416321 ZNF692Q9BU19 519 aaPredicted RBP13.74□□□□□ -0.21
DEPDC4-203ENST00000416321 NCOA3Q9Y6Q9 1424 aa13.73□□□□□ -0.21
DEPDC4-203ENST00000416321 BRD4O60885 1362 aaPredicted RBP13.73□□□□□ -0.21
DEPDC4-203ENST00000416321 PLEKHG3A1L390 1219 aa13.73□□□□□ -0.21
DEPDC4-203ENST00000416321 NGDNQ8NEJ9 315 aaKnown RBP13.73□□□□□ -0.21
DEPDC4-203ENST00000416321 STRCP1A6NGW2 1772 aa13.73□□□□□ -0.21
DEPDC4-203ENST00000416321 AKAP12Q02952 1782 aa13.73□□□□□ -0.21
DEPDC4-203ENST00000416321 EDC4Q6P2E9 1401 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms