RNA–Protein interactions for RNA: ENST00000415947.1

PARD3B-205, Transcript of par-3 family cell polarity regulator beta, humanhuman

TSL 1 (best)

Gene PARD3B, Length 1,668 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD3B-205ENST00000415947 MINK1Q8N4C8 1332 aaPredicted RBP31.58■■■□□ 2.65
PARD3B-205ENST00000415947 PTPRUQ92729 1446 aa31.58■■■□□ 2.65
PARD3B-205ENST00000415947 PIK3R4Q99570 1358 aa31.56■■■□□ 2.64
PARD3B-205ENST00000415947 ROBO2Q9HCK4 1378 aa31.54■■■□□ 2.64
PARD3B-205ENST00000415947 AMOTL2Q9Y2J4 779 aa31.52■■■□□ 2.64
PARD3B-205ENST00000415947 KTN1Q86UP2 1357 aaKnown RBP31.5■■■□□ 2.63
PARD3B-205ENST00000415947 NPHP4O75161 1426 aaPredicted RBP31.5■■■□□ 2.63
PARD3B-205ENST00000415947 CABP2Q9NPB3 220 aa31.5■■■□□ 2.63
PARD3B-205ENST00000415947 PTCH1Q13635 1447 aa31.49■■■□□ 2.63
PARD3B-205ENST00000415947 SRPK2P78362 688 aaKnown RBP31.48■■■□□ 2.63
PARD3B-205ENST00000415947 XRN1Q8IZH2 1706 aaKnown RBP31.48■■■□□ 2.63
PARD3B-205ENST00000415947 CDK19Q9BWU1 502 aa31.48■■■□□ 2.63
PARD3B-205ENST00000415947 ATAD2Q6PL18 1390 aa31.47■■■□□ 2.63
PARD3B-205ENST00000415947 NINLQ9Y2I6 1382 aa31.46■■■□□ 2.63
PARD3B-205ENST00000415947 SLC12A5Q9H2X9 1139 aa31.45■■■□□ 2.63
PARD3B-205ENST00000415947 KNSTRNQ9Y448 316 aa31.45■■■□□ 2.63
PARD3B-205ENST00000415947 RALBP1Q15311 655 aa31.44■■■□□ 2.62
PARD3B-205ENST00000415947 TMC1Q8TDI8 760 aa31.44■■■□□ 2.62
PARD3B-205ENST00000415947 NCKAP5LQ9HCH0 1330 aa31.44■■■□□ 2.62
PARD3B-205ENST00000415947 WASLO00401 505 aaPredicted RBP31.42■■■□□ 2.62
PARD3B-205ENST00000415947 CHD2O14647 1828 aaKnown RBP31.41■■■□□ 2.62
PARD3B-205ENST00000415947 PARD3Q8TEW0 1356 aa31.4■■■□□ 2.62
PARD3B-205ENST00000415947 ADGRB2O60241 1585 aa31.4■■■□□ 2.62
PARD3B-205ENST00000415947 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.4■■■□□ 2.62
PARD3B-205ENST00000415947 CARD14Q9BXL6 1004 aa31.4■■■□□ 2.62
PARD3B-205ENST00000415947 NPC1L1Q9UHC9 1359 aa31.4■■■□□ 2.62
PARD3B-205ENST00000415947 CNGB1Q14028 1251 aaPredicted RBP31.39■■■□□ 2.62
PARD3B-205ENST00000415947 AMER1Q5JTC6 1135 aaPredicted RBP31.39■■■□□ 2.62
PARD3B-205ENST00000415947 KCNA6P17658 529 aa31.38■■■□□ 2.61
PARD3B-205ENST00000415947 ANKRD36BQ8N2N9 1353 aa31.37■■■□□ 2.61
PARD3B-205ENST00000415947 LMTK3Q96Q04 1460 aa31.35■■■□□ 2.61
PARD3B-205ENST00000415947 CC2D1BQ5T0F9 858 aaKnown RBP31.35■■■□□ 2.61
PARD3B-205ENST00000415947 MYBBP1AQ9BQG0 1328 aaKnown RBP31.34■■■□□ 2.61
PARD3B-205ENST00000415947 CCDC184Q52MB2 194 aa31.32■■■□□ 2.6
PARD3B-205ENST00000415947 YTHDC1Q96MU7 727 aaKnown RBP31.32■■■□□ 2.6
PARD3B-205ENST00000415947 NSD3Q9BZ95 1437 aa31.3■■■□□ 2.6
PARD3B-205ENST00000415947 HSPA2P54652 639 aa31.3■■■□□ 2.6
PARD3B-205ENST00000415947 MRS2Q9HD23 443 aa31.29■■■□□ 2.6
PARD3B-205ENST00000415947 TERF2IPQ9NYB0 399 aa31.29■■■□□ 2.6
PARD3B-205ENST00000415947 CABP1Q9NZU7 370 aa31.29■■■□□ 2.6
PARD3B-205ENST00000415947 CD163L1Q9NR16 1453 aa31.28■■■□□ 2.6
PARD3B-205ENST00000415947 USP32Q8NFA0 1604 aa31.27■■■□□ 2.6
PARD3B-205ENST00000415947 NUDT16Q96DE0 195 aaKnown RBP31.27■■■□□ 2.6
PARD3B-205ENST00000415947 A0A1W2PP64 1363 aa31.27■■■□□ 2.6
PARD3B-205ENST00000415947 CCDC61Q9Y6R9 512 aa31.25■■■□□ 2.59
PARD3B-205ENST00000415947 NWD1Q149M9 1564 aa31.25■■■□□ 2.59
PARD3B-205ENST00000415947 ATP7BP35670 1465 aa31.25■■■□□ 2.59
PARD3B-205ENST00000415947 BRD4O60885 1362 aaPredicted RBP31.23■■■□□ 2.59
PARD3B-205ENST00000415947 HDGFL2Q7Z4V5 671 aaPredicted RBP31.22■■■□□ 2.59
PARD3B-205ENST00000415947 NLRP13Q86W25 1043 aa31.22■■■□□ 2.59
PARD3B-205ENST00000415947 PPIP5K1Q6PFW1 1433 aa31.22■■■□□ 2.59
PARD3B-205ENST00000415947 PRR36Q9H6K5 1346 aa31.22■■■□□ 2.59
PARD3B-205ENST00000415947 CGNL1Q0VF96 1302 aa31.21■■■□□ 2.59
PARD3B-205ENST00000415947 CPSF1Q10570 1443 aaKnown RBP31.17■■■□□ 2.58
PARD3B-205ENST00000415947 NSD2O96028 1365 aa31.16■■■□□ 2.58
PARD3B-205ENST00000415947 TOPAZ1Q8N9V7 1692 aa31.16■■■□□ 2.58
PARD3B-205ENST00000415947 STRCQ7RTU9 1775 aa31.16■■■□□ 2.58
PARD3B-205ENST00000415947 CDC42BPGQ6DT37 1551 aa31.15■■■□□ 2.58
PARD3B-205ENST00000415947 NKTRP30414 1462 aaKnown RBP31.14■■■□□ 2.57
PARD3B-205ENST00000415947 NALCNQ8IZF0 1738 aa31.14■■■□□ 2.57
PARD3B-205ENST00000415947 PPP2R1AP30153 589 aa31.13■■■□□ 2.57
PARD3B-205ENST00000415947 ADGRL3Q9HAR2 1447 aa31.12■■■□□ 2.57
PARD3B-205ENST00000415947 PLEKHG3A1L390 1219 aa31.12■■■□□ 2.57
PARD3B-205ENST00000415947 ANKARQ7Z5J8 1434 aa31.11■■■□□ 2.57
PARD3B-205ENST00000415947 CENPBP07199 599 aaPredicted RBP31.11■■■□□ 2.57
PARD3B-205ENST00000415947 FMN2Q9NZ56 1722 aa31.1■■■□□ 2.57
PARD3B-205ENST00000415947 PNISRQ8TF01 805 aaKnown RBP31.09■■■□□ 2.57
PARD3B-205ENST00000415947 ZNF692Q9BU19 519 aaPredicted RBP31.09■■■□□ 2.57
PARD3B-205ENST00000415947 NUTM2FA1L443 756 aa31.09■■■□□ 2.57
PARD3B-205ENST00000415947 MORC1Q86VD1 984 aa31.09■■■□□ 2.57
PARD3B-205ENST00000415947 ITSN1Q15811 1721 aa31.08■■■□□ 2.57
PARD3B-205ENST00000415947 AKAP12Q02952 1782 aa31.08■■■□□ 2.57
PARD3B-205ENST00000415947 FAM9BQ8IZU0 186 aa31.08■■■□□ 2.57
PARD3B-205ENST00000415947 EDC4Q6P2E9 1401 aaKnown RBP31.07■■■□□ 2.56
PARD3B-205ENST00000415947 PROSER2Q86WR7 435 aaPredicted RBP31.06■■■□□ 2.56
PARD3B-205ENST00000415947 RBM33Q96EV2 1170 aaKnown RBP31.06■■■□□ 2.56
PARD3B-205ENST00000415947 MON2Q7Z3U7 1717 aa31.06■■■□□ 2.56
PARD3B-205ENST00000415947 FYB1O15117 783 aa31.06■■■□□ 2.56
PARD3B-205ENST00000415947 STRCP1A6NGW2 1772 aa31.03■■■□□ 2.56
PARD3B-205ENST00000415947 RGPD8O14715 1765 aaPredicted RBP31.03■■■□□ 2.56
PARD3B-205ENST00000415947 ACEP12821 1306 aa31.03■■■□□ 2.56
PARD3B-205ENST00000415947 ANKRD26Q9UPS8 1709 aa31.02■■■□□ 2.56
PARD3B-205ENST00000415947 KIF20BQ96Q89 1820 aa31.01■■■□□ 2.55
PARD3B-205ENST00000415947 C14orf37Q86TY3 774 aa31■■■□□ 2.55
PARD3B-205ENST00000415947 GGNBP2Q9H3C7 697 aa31■■■□□ 2.55
PARD3B-205ENST00000415947 NCOA3Q9Y6Q9 1424 aa31■■■□□ 2.55
PARD3B-205ENST00000415947 POLR3AO14802 1390 aaPredicted RBP30.99■■■□□ 2.55
PARD3B-205ENST00000415947 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.97■■■□□ 2.55
PARD3B-205ENST00000415947 USP6P35125 1406 aa30.95■■■□□ 2.55
PARD3B-205ENST00000415947 C19orf44Q9H6X5 657 aa30.95■■■□□ 2.55
PARD3B-205ENST00000415947 NRKQ7Z2Y5 1582 aa30.95■■■□□ 2.54
PARD3B-205ENST00000415947 PMFBP1Q8TBY8 1022 aa30.94■■■□□ 2.54
PARD3B-205ENST00000415947 TMEM94Q12767 1356 aa30.94■■■□□ 2.54
PARD3B-205ENST00000415947 TNNT2P45379 298 aaPredicted RBP30.93■■■□□ 2.54
PARD3B-205ENST00000415947 SSH2Q76I76 1423 aa30.92■■■□□ 2.54
PARD3B-205ENST00000415947 HNRNPUQ00839 825 aaKnown RBP eCLIP30.92■■■□□ 2.54
PARD3B-205ENST00000415947 NGDNQ8NEJ9 315 aaKnown RBP30.92■■■□□ 2.54
PARD3B-205ENST00000415947 DMRT2Q9Y5R5 561 aa30.91■■■□□ 2.54
PARD3B-205ENST00000415947 TTC21BQ7Z4L5 1316 aa30.91■■■□□ 2.54
PARD3B-205ENST00000415947 NME9Q86XW9 330 aa30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms