RNA–Protein interactions for RNA: ENST00000415947.1

PARD3B-205, Transcript of par-3 family cell polarity regulator beta, humanhuman

TSL 1 (best)

Gene PARD3B, Length 1,668 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD3B-205ENST00000415947 NISCHQ9Y2I1 1504 aa52.8■■■■■ 6.04
PARD3B-205ENST00000415947 CCDC180Q9P1Z9 1646 aa46.18■■■■■ 4.98
PARD3B-205ENST00000415947 ZCCHC6Q5VYS8 1495 aaKnown RBP44.3■■■■■ 4.68
PARD3B-205ENST00000415947 ABCC9O60706 1549 aa43.81■■■■■ 4.6
PARD3B-205ENST00000415947 DCAF1Q9Y4B6 1507 aa43.71■■■■■ 4.59
PARD3B-205ENST00000415947 DCAF8L2P0C7V8 631 aa43.59■■■■■ 4.57
PARD3B-205ENST00000415947 MYO15BQ96JP2 1530 aa43.31■■■■■ 4.52
PARD3B-205ENST00000415947 NACADO15069 1562 aa43.08■■■■■ 4.49
PARD3B-205ENST00000415947 SHROOM4Q9ULL8 1493 aa42.76■■■■■ 4.44
PARD3B-205ENST00000415947 RB1CC1Q8TDY2 1594 aa42.75■■■■■ 4.43
PARD3B-205ENST00000415947 SCRIBQ14160 1630 aa42.34■■■■■ 4.37
PARD3B-205ENST00000415947 UNC13AQ9UPW8 1703 aa41.84■■■■■ 4.29
PARD3B-205ENST00000415947 BICRAQ9NZM4 1560 aa41.45■■■■■ 4.23
PARD3B-205ENST00000415947 PABPN1Q86U42 306 aaKnown RBP eCLIP41.26■■■■■ 4.2
PARD3B-205ENST00000415947 SUPT5HO00267 1087 aaKnown RBP41.05■■■■■ 4.16
PARD3B-205ENST00000415947 CECR2Q9BXF3 1484 aa41.01■■■■■ 4.16
PARD3B-205ENST00000415947 RSF1Q96T23 1441 aaPredicted RBP40.85■■■■■ 4.13
PARD3B-205ENST00000415947 BAZ1AQ9NRL2 1556 aaPredicted RBP40.79■■■■■ 4.12
PARD3B-205ENST00000415947 MROH2BQ7Z745 1585 aa40.76■■■■■ 4.11
PARD3B-205ENST00000415947 SMARCA4P51532 1647 aa40.62■■■■■ 4.09
PARD3B-205ENST00000415947 WIZO95785 1651 aa40.39■■■■■ 4.06
PARD3B-205ENST00000415947 EIF4G1Q04637 1599 aaKnown RBP40.21■■■■■ 4.03
PARD3B-205ENST00000415947 PEG3Q9GZU2 1588 aa40.2■■■■■ 4.03
PARD3B-205ENST00000415947 ATAD2BQ9ULI0 1458 aa40.03■■■■■ 4
PARD3B-205ENST00000415947 SMARCA2P51531 1590 aa40.02■■■■■ 4
PARD3B-205ENST00000415947 TOP2AP11388 1531 aaKnown RBP40■■■■□ 3.99
PARD3B-205ENST00000415947 BAZ1BQ9UIG0 1483 aaKnown RBP39.78■■■■□ 3.96
PARD3B-205ENST00000415947 NCAPD3P42695 1498 aa39.77■■■■□ 3.96
PARD3B-205ENST00000415947 CC2D2AQ9P2K1 1620 aa39.68■■■■□ 3.94
PARD3B-205ENST00000415947 HMGXB3Q12766 1538 aa39.67■■■■□ 3.94
PARD3B-205ENST00000415947 CCDC88BA6NC98 1476 aa39.58■■■■□ 3.93
PARD3B-205ENST00000415947 CHIC1Q5VXU3 224 aa39.22■■■■□ 3.87
PARD3B-205ENST00000415947 DNAJC5BQ9UF47 199 aa38.88■■■■□ 3.81
PARD3B-205ENST00000415947 CFTRP13569 1480 aa38.8■■■■□ 3.8
PARD3B-205ENST00000415947 CADPSQ9ULU8 1353 aa38.71■■■■□ 3.79
PARD3B-205ENST00000415947 TRIM41Q8WV44 630 aa38.66■■■■□ 3.78
PARD3B-205ENST00000415947 ABCC8Q09428 1581 aa38.62■■■■□ 3.77
PARD3B-205ENST00000415947 PRDM2Q13029 1718 aa38.56■■■■□ 3.76
PARD3B-205ENST00000415947 WRNQ14191 1432 aaPredicted RBP eCLIP38.46■■■■□ 3.75
PARD3B-205ENST00000415947 LAMC3Q9Y6N6 1575 aa38.44■■■■□ 3.74
PARD3B-205ENST00000415947 NESP48681 1621 aa38.39■■■■□ 3.74
PARD3B-205ENST00000415947 SYNJ1O43426 1573 aa38.28■■■■□ 3.72
PARD3B-205ENST00000415947 FANCD2Q9BXW9 1451 aa38.26■■■■□ 3.71
PARD3B-205ENST00000415947 TOP2BQ02880 1626 aa38.19■■■■□ 3.7
PARD3B-205ENST00000415947 PDS5BQ9NTI5 1447 aa38.15■■■■□ 3.7
PARD3B-205ENST00000415947 BIVM-ERCC5R4GMW8 1640 aa38.15■■■■□ 3.7
PARD3B-205ENST00000415947 CUX1P39880 1505 aa38.12■■■■□ 3.69
PARD3B-205ENST00000415947 CEP164Q9UPV0 1460 aa38.04■■■■□ 3.68
PARD3B-205ENST00000415947 KIF21AQ7Z4S6 1674 aa37.93■■■■□ 3.66
PARD3B-205ENST00000415947 DNMBPQ6XZF7 1577 aa37.88■■■■□ 3.65
PARD3B-205ENST00000415947 FAM9AQ8IZU1 332 aaPredicted RBP37.88■■■■□ 3.65
PARD3B-205ENST00000415947 SOGA1O94964 1423 aa37.86■■■■□ 3.65
PARD3B-205ENST00000415947 TOPBP1Q92547 1522 aa37.82■■■■□ 3.64
PARD3B-205ENST00000415947 EEA1Q15075 1411 aa37.81■■■■□ 3.64
PARD3B-205ENST00000415947 URB2Q14146 1524 aaKnown RBP37.79■■■■□ 3.64
PARD3B-205ENST00000415947 FGD5Q6ZNL6 1462 aa37.74■■■■□ 3.63
PARD3B-205ENST00000415947 RUSC2Q8N2Y8 1516 aa37.73■■■■□ 3.63
PARD3B-205ENST00000415947 LOC105371045A0A1W2PR82 267 aa37.66■■■■□ 3.62
PARD3B-205ENST00000415947 MRC2Q9UBG0 1479 aa37.66■■■■□ 3.62
PARD3B-205ENST00000415947 POLA1P09884 1462 aaPredicted RBP37.61■■■■□ 3.61
PARD3B-205ENST00000415947 CSRNP3Q8WYN3 585 aa37.6■■■■□ 3.61
PARD3B-205ENST00000415947 ERCC6Q03468 1493 aa37.6■■■■□ 3.61
PARD3B-205ENST00000415947 KIF27Q86VH2 1401 aa37.51■■■■□ 3.6
PARD3B-205ENST00000415947 WDR62O43379 1518 aa37.48■■■■□ 3.59
PARD3B-205ENST00000415947 RAD54L2Q9Y4B4 1467 aa37.46■■■■□ 3.59
PARD3B-205ENST00000415947 CUX2O14529 1486 aa37.45■■■■□ 3.58
PARD3B-205ENST00000415947 ABCA10Q8WWZ4 1543 aa37.44■■■■□ 3.58
PARD3B-205ENST00000415947 THOC2Q8NI27 1593 aaKnown RBP37.4■■■■□ 3.58
PARD3B-205ENST00000415947 WDR97A6NE52 1622 aa37.32■■■■□ 3.57
PARD3B-205ENST00000415947 KIF21BO75037 1637 aa37.3■■■■□ 3.56
PARD3B-205ENST00000415947 EHMT2Q96KQ7 1210 aa37.29■■■■□ 3.56
PARD3B-205ENST00000415947 TARBP1Q13395 1621 aaKnown RBP37.29■■■■□ 3.56
PARD3B-205ENST00000415947 GOLGA3Q08378 1498 aa37.23■■■■□ 3.55
PARD3B-205ENST00000415947 IGF1RP08069 1367 aa37.22■■■■□ 3.55
PARD3B-205ENST00000415947 PRXQ9BXM0 1461 aa37.21■■■■□ 3.55
PARD3B-205ENST00000415947 IFT140Q96RY7 1462 aa37.17■■■■□ 3.54
PARD3B-205ENST00000415947 ABCA5Q8WWZ7 1642 aa37.14■■■■□ 3.54
PARD3B-205ENST00000415947 TDRD9Q8NDG6 1382 aaKnown RBP37.13■■■■□ 3.53
PARD3B-205ENST00000415947 ERICH3Q5RHP9 1530 aa37.12■■■■□ 3.53
PARD3B-205ENST00000415947 RAPGEF2Q9Y4G8 1499 aa37.11■■■■□ 3.53
PARD3B-205ENST00000415947 TNIKQ9UKE5 1360 aa37.09■■■■□ 3.53
PARD3B-205ENST00000415947 GAPVD1Q14C86 1478 aa37.08■■■■□ 3.53
PARD3B-205ENST00000415947 UBTFP17480 764 aaKnown RBP37.05■■■■□ 3.52
PARD3B-205ENST00000415947 CARMIL1Q5VZK9 1371 aa37.01■■■■□ 3.52
PARD3B-205ENST00000415947 CUL7Q14999 1698 aa36.95■■■■□ 3.51
PARD3B-205ENST00000415947 AQRO60306 1485 aaKnown RBP eCLIP36.93■■■■□ 3.5
PARD3B-205ENST00000415947 ZNF608Q9ULD9 1512 aaPredicted RBP36.93■■■■□ 3.5
PARD3B-205ENST00000415947 PBRM1Q86U86 1689 aa36.86■■■■□ 3.49
PARD3B-205ENST00000415947 GRIN2BQ13224 1484 aa36.84■■■■□ 3.49
PARD3B-205ENST00000415947 CEP162Q5TB80 1403 aa36.83■■■■□ 3.49
PARD3B-205ENST00000415947 EIF4G3O43432 1585 aaKnown RBP36.81■■■■□ 3.48
PARD3B-205ENST00000415947 FHAD1B1AJZ9 1412 aa36.69■■■■□ 3.46
PARD3B-205ENST00000415947 ADAMTS12P58397 1594 aa36.66■■■■□ 3.46
PARD3B-205ENST00000415947 CLIP1P30622 1438 aa36.62■■■■□ 3.45
PARD3B-205ENST00000415947 SNAPC4Q5SXM2 1469 aa36.58■■■■□ 3.45
PARD3B-205ENST00000415947 MAGI1Q96QZ7 1491 aaPredicted RBP36.56■■■■□ 3.44
PARD3B-205ENST00000415947 CTTNBP2Q8WZ74 1663 aa36.47■■■■□ 3.43
PARD3B-205ENST00000415947 RANGAP1P46060 587 aaPredicted RBP36.45■■■■□ 3.42
PARD3B-205ENST00000415947 SYNJ2O15056 1496 aa36.42■■■■□ 3.42
PARD3B-205ENST00000415947 GRIN2AQ12879 1464 aa36.37■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 238.4 ms