RNA–Protein interactions for RNA: ENST00000412036.6

CXXC1-202, Transcript of CXXC finger protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXXC1, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-202ENST00000412036 CPS1P31327 1500 aa24.77■■□□□ 1.56
CXXC1-202ENST00000412036 CC2D1BQ5T0F9 858 aaKnown RBP24.76■■□□□ 1.55
CXXC1-202ENST00000412036 EVC2Q86UK5 1308 aa24.76■■□□□ 1.55
CXXC1-202ENST00000412036 TBX22Q9Y458 520 aa24.74■■□□□ 1.55
CXXC1-202ENST00000412036 AMER1Q5JTC6 1135 aaPredicted RBP24.73■■□□□ 1.55
CXXC1-202ENST00000412036 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.73■■□□□ 1.55
CXXC1-202ENST00000412036 TMC1Q8TDI8 760 aa24.73■■□□□ 1.55
CXXC1-202ENST00000412036 CDK19Q9BWU1 502 aa24.72■■□□□ 1.55
CXXC1-202ENST00000412036 ANKLE2Q86XL3 938 aa24.72■■□□□ 1.55
CXXC1-202ENST00000412036 AMOTL2Q9Y2J4 779 aa24.72■■□□□ 1.55
CXXC1-202ENST00000412036 PARD3Q8TEW0 1356 aa24.71■■□□□ 1.55
CXXC1-202ENST00000412036 NCKAP5LQ9HCH0 1330 aa24.71■■□□□ 1.55
CXXC1-202ENST00000412036 FAM135BQ49AJ0 1406 aa24.71■■□□□ 1.55
CXXC1-202ENST00000412036 SLC24A1O60721 1099 aa24.7■■□□□ 1.55
CXXC1-202ENST00000412036 SRPK2P78362 688 aaKnown RBP24.7■■□□□ 1.55
CXXC1-202ENST00000412036 DIP2AQ14689 1571 aa24.68■■□□□ 1.54
CXXC1-202ENST00000412036 XRN1Q8IZH2 1706 aaKnown RBP24.68■■□□□ 1.54
CXXC1-202ENST00000412036 CD163L1Q9NR16 1453 aa24.67■■□□□ 1.54
CXXC1-202ENST00000412036 SIRT1Q96EB6 747 aa24.66■■□□□ 1.54
CXXC1-202ENST00000412036 KCNA6P17658 529 aa24.66■■□□□ 1.54
CXXC1-202ENST00000412036 KTN1Q86UP2 1357 aaKnown RBP24.66■■□□□ 1.54
CXXC1-202ENST00000412036 HSPA2P54652 639 aa24.65■■□□□ 1.54
CXXC1-202ENST00000412036 MRS2Q9HD23 443 aa24.65■■□□□ 1.54
CXXC1-202ENST00000412036 KNSTRNQ9Y448 316 aa24.65■■□□□ 1.54
CXXC1-202ENST00000412036 PUS7Q96PZ0 661 aaKnown RBP24.64■■□□□ 1.54
CXXC1-202ENST00000412036 NSD3Q9BZ95 1437 aa24.64■■□□□ 1.53
CXXC1-202ENST00000412036 NPHP4O75161 1426 aaPredicted RBP24.63■■□□□ 1.53
CXXC1-202ENST00000412036 WASLO00401 505 aaPredicted RBP24.63■■□□□ 1.53
CXXC1-202ENST00000412036 RBM33Q96EV2 1170 aaKnown RBP24.63■■□□□ 1.53
CXXC1-202ENST00000412036 A0A1W2PP64 1363 aa24.62■■□□□ 1.53
CXXC1-202ENST00000412036 PRR36Q9H6K5 1346 aa24.62■■□□□ 1.53
CXXC1-202ENST00000412036 SCAF1Q9H7N4 1312 aaKnown RBP24.62■■□□□ 1.53
CXXC1-202ENST00000412036 RALBP1Q15311 655 aa24.61■■□□□ 1.53
CXXC1-202ENST00000412036 PTCH1Q13635 1447 aa24.61■■□□□ 1.53
CXXC1-202ENST00000412036 CHD2O14647 1828 aaKnown RBP24.6■■□□□ 1.53
CXXC1-202ENST00000412036 CABP1Q9NZU7 370 aa24.6■■□□□ 1.53
CXXC1-202ENST00000412036 MYBBP1AQ9BQG0 1328 aaKnown RBP24.6■■□□□ 1.53
CXXC1-202ENST00000412036 ANKRD36BQ8N2N9 1353 aa24.59■■□□□ 1.53
CXXC1-202ENST00000412036 ATAD2Q6PL18 1390 aa24.58■■□□□ 1.53
CXXC1-202ENST00000412036 NUTM2FA1L443 756 aa24.58■■□□□ 1.52
CXXC1-202ENST00000412036 FAM9BQ8IZU0 186 aa24.57■■□□□ 1.52
CXXC1-202ENST00000412036 ADGRB2O60241 1585 aa24.57■■□□□ 1.52
CXXC1-202ENST00000412036 LMTK3Q96Q04 1460 aa24.56■■□□□ 1.52
CXXC1-202ENST00000412036 ATP7BP35670 1465 aa24.56■■□□□ 1.52
CXXC1-202ENST00000412036 PIK3R4Q99570 1358 aa24.54■■□□□ 1.52
CXXC1-202ENST00000412036 NUDT16Q96DE0 195 aaKnown RBP24.54■■□□□ 1.52
CXXC1-202ENST00000412036 NPC1L1Q9UHC9 1359 aa24.54■■□□□ 1.52
CXXC1-202ENST00000412036 USP32Q8NFA0 1604 aa24.52■■□□□ 1.52
CXXC1-202ENST00000412036 PPP2R1AP30153 589 aa24.52■■□□□ 1.52
CXXC1-202ENST00000412036 PNISRQ8TF01 805 aaKnown RBP24.51■■□□□ 1.51
CXXC1-202ENST00000412036 PPIP5K1Q6PFW1 1433 aa24.51■■□□□ 1.51
CXXC1-202ENST00000412036 NLRP13Q86W25 1043 aa24.5■■□□□ 1.51
CXXC1-202ENST00000412036 BRD4O60885 1362 aaPredicted RBP24.5■■□□□ 1.51
CXXC1-202ENST00000412036 SENP3-EIF4A1A0A087X0R7 540 aa24.5■■□□□ 1.51
CXXC1-202ENST00000412036 NINLQ9Y2I6 1382 aa24.49■■□□□ 1.51
CXXC1-202ENST00000412036 RGPD8O14715 1765 aaPredicted RBP24.48■■□□□ 1.51
CXXC1-202ENST00000412036 NALCNQ8IZF0 1738 aa24.48■■□□□ 1.51
CXXC1-202ENST00000412036 NKTRP30414 1462 aaKnown RBP24.48■■□□□ 1.51
CXXC1-202ENST00000412036 TOPAZ1Q8N9V7 1692 aa24.47■■□□□ 1.51
CXXC1-202ENST00000412036 CPSF1Q10570 1443 aaKnown RBP24.47■■□□□ 1.51
CXXC1-202ENST00000412036 STRCP1A6NGW2 1772 aa24.46■■□□□ 1.51
CXXC1-202ENST00000412036 STRCQ7RTU9 1775 aa24.46■■□□□ 1.51
CXXC1-202ENST00000412036 TNNT2P45379 298 aaPredicted RBP24.46■■□□□ 1.51
CXXC1-202ENST00000412036 CCDC61Q9Y6R9 512 aa24.45■■□□□ 1.5
CXXC1-202ENST00000412036 GGNBP2Q9H3C7 697 aa24.44■■□□□ 1.5
CXXC1-202ENST00000412036 FYB1O15117 783 aa24.44■■□□□ 1.5
CXXC1-202ENST00000412036 NWD1Q149M9 1564 aa24.43■■□□□ 1.5
CXXC1-202ENST00000412036 CDC42BPGQ6DT37 1551 aa24.43■■□□□ 1.5
CXXC1-202ENST00000412036 CGNL1Q0VF96 1302 aa24.43■■□□□ 1.5
CXXC1-202ENST00000412036 TERF2IPQ9NYB0 399 aa24.43■■□□□ 1.5
CXXC1-202ENST00000412036 CENPBP07199 599 aaPredicted RBP24.42■■□□□ 1.5
CXXC1-202ENST00000412036 HNRNPUQ00839 825 aaKnown RBP eCLIP24.42■■□□□ 1.5
CXXC1-202ENST00000412036 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.41■■□□□ 1.5
CXXC1-202ENST00000412036 ZRANB1Q9UGI0 708 aa24.4■■□□□ 1.5
CXXC1-202ENST00000412036 AKAP12Q02952 1782 aa24.4■■□□□ 1.5
CXXC1-202ENST00000412036 HDGFL2Q7Z4V5 671 aaPredicted RBP24.39■■□□□ 1.5
CXXC1-202ENST00000412036 MON2Q7Z3U7 1717 aa24.39■■□□□ 1.49
CXXC1-202ENST00000412036 FBLN1P23142 703 aa24.38■■□□□ 1.49
CXXC1-202ENST00000412036 MORC1Q86VD1 984 aa24.38■■□□□ 1.49
CXXC1-202ENST00000412036 FMN2Q9NZ56 1722 aa24.38■■□□□ 1.49
CXXC1-202ENST00000412036 PMFBP1Q8TBY8 1022 aa24.37■■□□□ 1.49
CXXC1-202ENST00000412036 ACEP12821 1306 aa24.37■■□□□ 1.49
CXXC1-202ENST00000412036 NME9Q86XW9 330 aa24.35■■□□□ 1.49
CXXC1-202ENST00000412036 KIF20BQ96Q89 1820 aa24.35■■□□□ 1.49
CXXC1-202ENST00000412036 ITSN1Q15811 1721 aa24.35■■□□□ 1.49
CXXC1-202ENST00000412036 PLEKHG3A1L390 1219 aa24.35■■□□□ 1.49
CXXC1-202ENST00000412036 ADGRL3Q9HAR2 1447 aa24.34■■□□□ 1.49
CXXC1-202ENST00000412036 NRKQ7Z2Y5 1582 aa24.33■■□□□ 1.49
CXXC1-202ENST00000412036 ANKRD26Q9UPS8 1709 aa24.33■■□□□ 1.49
CXXC1-202ENST00000412036 EDC4Q6P2E9 1401 aaKnown RBP24.33■■□□□ 1.48
CXXC1-202ENST00000412036 NSD2O96028 1365 aa24.32■■□□□ 1.48
CXXC1-202ENST00000412036 PROSER2Q86WR7 435 aaPredicted RBP24.3■■□□□ 1.48
CXXC1-202ENST00000412036 ADAMTS8Q9UP79 889 aa24.3■■□□□ 1.48
CXXC1-202ENST00000412036 MTHFSP49914 203 aa24.29■■□□□ 1.48
CXXC1-202ENST00000412036 USP6P35125 1406 aa24.29■■□□□ 1.48
CXXC1-202ENST00000412036 SSH2Q76I76 1423 aa24.29■■□□□ 1.48
CXXC1-202ENST00000412036 ANKARQ7Z5J8 1434 aa24.27■■□□□ 1.48
CXXC1-202ENST00000412036 POLR3AO14802 1390 aaPredicted RBP24.27■■□□□ 1.48
CXXC1-202ENST00000412036 SHPRHQ149N8 1683 aa24.26■■□□□ 1.47
CXXC1-202ENST00000412036 TMEM94Q12767 1356 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms