RNA–Protein interactions for RNA: ENST00000412036.6

CXXC1-202, Transcript of CXXC finger protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXXC1, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-202ENST00000412036 NISCHQ9Y2I1 1504 aa41.42■■■■■ 4.22
CXXC1-202ENST00000412036 CCDC180Q9P1Z9 1646 aa36.02■■■■□ 3.36
CXXC1-202ENST00000412036 ZCCHC6Q5VYS8 1495 aaKnown RBP34.77■■■■□ 3.16
CXXC1-202ENST00000412036 ABCC9O60706 1549 aa34.43■■■■□ 3.1
CXXC1-202ENST00000412036 DCAF8L2P0C7V8 631 aa34.34■■■■□ 3.09
CXXC1-202ENST00000412036 DCAF1Q9Y4B6 1507 aa34.1■■■■□ 3.05
CXXC1-202ENST00000412036 SHROOM4Q9ULL8 1493 aa33.91■■■■□ 3.02
CXXC1-202ENST00000412036 MYO15BQ96JP2 1530 aa33.7■■■□□ 2.99
CXXC1-202ENST00000412036 NACADO15069 1562 aa33.58■■■□□ 2.97
CXXC1-202ENST00000412036 RB1CC1Q8TDY2 1594 aa33.34■■■□□ 2.93
CXXC1-202ENST00000412036 SCRIBQ14160 1630 aa33.33■■■□□ 2.93
CXXC1-202ENST00000412036 UNC13AQ9UPW8 1703 aa32.89■■■□□ 2.86
CXXC1-202ENST00000412036 BICRAQ9NZM4 1560 aa32.57■■■□□ 2.8
CXXC1-202ENST00000412036 PABPN1Q86U42 306 aaKnown RBP eCLIP32.52■■■□□ 2.8
CXXC1-202ENST00000412036 SUPT5HO00267 1087 aaKnown RBP32.48■■■□□ 2.79
CXXC1-202ENST00000412036 CECR2Q9BXF3 1484 aa32.37■■■□□ 2.77
CXXC1-202ENST00000412036 RSF1Q96T23 1441 aaPredicted RBP32.15■■■□□ 2.74
CXXC1-202ENST00000412036 MROH2BQ7Z745 1585 aa32.11■■■□□ 2.73
CXXC1-202ENST00000412036 BAZ1AQ9NRL2 1556 aaPredicted RBP31.9■■■□□ 2.7
CXXC1-202ENST00000412036 SMARCA4P51532 1647 aa31.87■■■□□ 2.69
CXXC1-202ENST00000412036 WIZO95785 1651 aa31.84■■■□□ 2.69
CXXC1-202ENST00000412036 EIF4G1Q04637 1599 aaKnown RBP31.51■■■□□ 2.63
CXXC1-202ENST00000412036 PEG3Q9GZU2 1588 aa31.42■■■□□ 2.62
CXXC1-202ENST00000412036 ATAD2BQ9ULI0 1458 aa31.39■■■□□ 2.62
CXXC1-202ENST00000412036 TOP2AP11388 1531 aaKnown RBP31.36■■■□□ 2.61
CXXC1-202ENST00000412036 SMARCA2P51531 1590 aa31.22■■■□□ 2.59
CXXC1-202ENST00000412036 BAZ1BQ9UIG0 1483 aaKnown RBP31.15■■■□□ 2.58
CXXC1-202ENST00000412036 CCDC88BA6NC98 1476 aa31.14■■■□□ 2.57
CXXC1-202ENST00000412036 CC2D2AQ9P2K1 1620 aa31.1■■■□□ 2.57
CXXC1-202ENST00000412036 NCAPD3P42695 1498 aa31.08■■■□□ 2.57
CXXC1-202ENST00000412036 CHIC1Q5VXU3 224 aa31.01■■■□□ 2.55
CXXC1-202ENST00000412036 HMGXB3Q12766 1538 aa30.98■■■□□ 2.55
CXXC1-202ENST00000412036 DNAJC5BQ9UF47 199 aa30.72■■■□□ 2.51
CXXC1-202ENST00000412036 ABCC8Q09428 1581 aa30.53■■■□□ 2.48
CXXC1-202ENST00000412036 TRIM41Q8WV44 630 aa30.41■■■□□ 2.46
CXXC1-202ENST00000412036 CFTRP13569 1480 aa30.38■■■□□ 2.45
CXXC1-202ENST00000412036 CADPSQ9ULU8 1353 aa30.29■■■□□ 2.44
CXXC1-202ENST00000412036 NESP48681 1621 aa30.27■■■□□ 2.44
CXXC1-202ENST00000412036 SYNJ1O43426 1573 aa30.18■■■□□ 2.42
CXXC1-202ENST00000412036 WRNQ14191 1432 aaPredicted RBP eCLIP30.18■■■□□ 2.42
CXXC1-202ENST00000412036 PRDM2Q13029 1718 aa30.13■■■□□ 2.41
CXXC1-202ENST00000412036 FAM9AQ8IZU1 332 aaPredicted RBP30.03■■■□□ 2.4
CXXC1-202ENST00000412036 CUX1P39880 1505 aa30■■■□□ 2.39
CXXC1-202ENST00000412036 LAMC3Q9Y6N6 1575 aa29.98■■■□□ 2.39
CXXC1-202ENST00000412036 FANCD2Q9BXW9 1451 aa29.98■■■□□ 2.39
CXXC1-202ENST00000412036 LOC105371045A0A1W2PR82 267 aa29.95■■■□□ 2.39
CXXC1-202ENST00000412036 TOP2BQ02880 1626 aa29.95■■■□□ 2.38
CXXC1-202ENST00000412036 SOGA1O94964 1423 aa29.92■■■□□ 2.38
CXXC1-202ENST00000412036 BIVM-ERCC5R4GMW8 1640 aa29.91■■■□□ 2.38
CXXC1-202ENST00000412036 RUSC2Q8N2Y8 1516 aa29.89■■■□□ 2.38
CXXC1-202ENST00000412036 KIF21AQ7Z4S6 1674 aa29.8■■■□□ 2.36
CXXC1-202ENST00000412036 CEP164Q9UPV0 1460 aa29.75■■■□□ 2.35
CXXC1-202ENST00000412036 EHMT2Q96KQ7 1210 aa29.74■■■□□ 2.35
CXXC1-202ENST00000412036 PDS5BQ9NTI5 1447 aa29.73■■■□□ 2.35
CXXC1-202ENST00000412036 URB2Q14146 1524 aaKnown RBP29.7■■■□□ 2.35
CXXC1-202ENST00000412036 TOPBP1Q92547 1522 aa29.66■■■□□ 2.34
CXXC1-202ENST00000412036 FGD5Q6ZNL6 1462 aa29.65■■■□□ 2.34
CXXC1-202ENST00000412036 DNMBPQ6XZF7 1577 aa29.64■■■□□ 2.33
CXXC1-202ENST00000412036 POLA1P09884 1462 aaPredicted RBP29.53■■■□□ 2.32
CXXC1-202ENST00000412036 CSRNP3Q8WYN3 585 aa29.52■■■□□ 2.32
CXXC1-202ENST00000412036 RAD54L2Q9Y4B4 1467 aa29.52■■■□□ 2.32
CXXC1-202ENST00000412036 EEA1Q15075 1411 aa29.5■■■□□ 2.31
CXXC1-202ENST00000412036 MRC2Q9UBG0 1479 aa29.43■■■□□ 2.3
CXXC1-202ENST00000412036 CUX2O14529 1486 aa29.41■■■□□ 2.3
CXXC1-202ENST00000412036 ERCC6Q03468 1493 aa29.38■■■□□ 2.29
CXXC1-202ENST00000412036 KIF27Q86VH2 1401 aa29.36■■■□□ 2.29
CXXC1-202ENST00000412036 ABCA10Q8WWZ4 1543 aa29.31■■■□□ 2.28
CXXC1-202ENST00000412036 THOC2Q8NI27 1593 aaKnown RBP29.31■■■□□ 2.28
CXXC1-202ENST00000412036 WDR62O43379 1518 aa29.3■■■□□ 2.28
CXXC1-202ENST00000412036 WDR97A6NE52 1622 aa29.28■■■□□ 2.28
CXXC1-202ENST00000412036 RAPGEF2Q9Y4G8 1499 aa29.28■■■□□ 2.28
CXXC1-202ENST00000412036 KIF21BO75037 1637 aa29.26■■■□□ 2.27
CXXC1-202ENST00000412036 TARBP1Q13395 1621 aaKnown RBP29.25■■■□□ 2.27
CXXC1-202ENST00000412036 IGF1RP08069 1367 aa29.25■■■□□ 2.27
CXXC1-202ENST00000412036 PRXQ9BXM0 1461 aa29.23■■■□□ 2.27
CXXC1-202ENST00000412036 TDRD9Q8NDG6 1382 aaKnown RBP29.22■■■□□ 2.27
CXXC1-202ENST00000412036 GOLGA3Q08378 1498 aa29.21■■■□□ 2.27
CXXC1-202ENST00000412036 UBTFP17480 764 aaKnown RBP29.13■■■□□ 2.25
CXXC1-202ENST00000412036 ABCA5Q8WWZ7 1642 aa29.13■■■□□ 2.25
CXXC1-202ENST00000412036 TNIKQ9UKE5 1360 aa29.11■■■□□ 2.25
CXXC1-202ENST00000412036 ZNF608Q9ULD9 1512 aaPredicted RBP29.09■■■□□ 2.25
CXXC1-202ENST00000412036 AQRO60306 1485 aaKnown RBP eCLIP29.06■■■□□ 2.242e-6■■■■□ 20.7
CXXC1-202ENST00000412036 ERICH3Q5RHP9 1530 aa29.05■■■□□ 2.24
CXXC1-202ENST00000412036 GAPVD1Q14C86 1478 aa29.04■■■□□ 2.24
CXXC1-202ENST00000412036 CARMIL1Q5VZK9 1371 aa29.03■■■□□ 2.24
CXXC1-202ENST00000412036 CEP162Q5TB80 1403 aa29.02■■■□□ 2.24
CXXC1-202ENST00000412036 IFT140Q96RY7 1462 aa29.01■■■□□ 2.23
CXXC1-202ENST00000412036 PBRM1Q86U86 1689 aa28.9■■■□□ 2.22
CXXC1-202ENST00000412036 RANGAP1P46060 587 aaPredicted RBP28.9■■■□□ 2.22
CXXC1-202ENST00000412036 EIF4G3O43432 1585 aaKnown RBP28.87■■■□□ 2.21
CXXC1-202ENST00000412036 CUL7Q14999 1698 aa28.86■■■□□ 2.21
CXXC1-202ENST00000412036 CLIP1P30622 1438 aa28.79■■■□□ 2.2
CXXC1-202ENST00000412036 GRIN2BQ13224 1484 aa28.79■■■□□ 2.2
CXXC1-202ENST00000412036 ADAMTS12P58397 1594 aa28.75■■■□□ 2.19
CXXC1-202ENST00000412036 SNAPC4Q5SXM2 1469 aa28.72■■■□□ 2.19
CXXC1-202ENST00000412036 FHAD1B1AJZ9 1412 aa28.68■■■□□ 2.18
CXXC1-202ENST00000412036 ARAP1Q96P48 1450 aa28.63■■■□□ 2.17
CXXC1-202ENST00000412036 ARHGAP35Q9NRY4 1499 aa28.63■■■□□ 2.17
CXXC1-202ENST00000412036 PPARGC1BQ86YN6 1023 aaKnown RBP28.61■■■□□ 2.17
CXXC1-202ENST00000412036 CTTNBP2Q8WZ74 1663 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms