RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 AGLP35573 1532 aa8.53□□□□□ -1.04
GTF3C3-202ENST00000409364 CEP152O94986 1710 aa8.53□□□□□ -1.04
GTF3C3-202ENST00000409364 STAG3Q9UJ98 1225 aa8.53□□□□□ -1.04
GTF3C3-202ENST00000409364 DISP3Q9P2K9 1392 aa8.53□□□□□ -1.04
GTF3C3-202ENST00000409364 NRXN1Q9ULB1 1477 aa8.52□□□□□ -1.05
GTF3C3-202ENST00000409364 POLR1AO95602 1720 aaPredicted RBP8.52□□□□□ -1.05
GTF3C3-202ENST00000409364 HNRNPUQ00839 825 aaKnown RBP eCLIP8.52□□□□□ -1.05
GTF3C3-202ENST00000409364 CCDC184Q52MB2 194 aa8.52□□□□□ -1.05
GTF3C3-202ENST00000409364 ESF1Q9H501 851 aaKnown RBP8.52□□□□□ -1.05
GTF3C3-202ENST00000409364 PANK3Q9H999 370 aa8.52□□□□□ -1.05
GTF3C3-202ENST00000409364 UGGT1Q9NYU2 1555 aa8.52□□□□□ -1.05
GTF3C3-202ENST00000409364 MADDQ8WXG6 1647 aa8.52□□□□□ -1.05
GTF3C3-202ENST00000409364 ADGRB3O60242 1522 aa8.52□□□□□ -1.05
GTF3C3-202ENST00000409364 FAM9BQ8IZU0 186 aa8.51□□□□□ -1.05
GTF3C3-202ENST00000409364 TMC1Q8TDI8 760 aa8.51□□□□□ -1.05
GTF3C3-202ENST00000409364 REREQ9P2R6 1566 aa8.51□□□□□ -1.05
GTF3C3-202ENST00000409364 FBXO31Q5XUX0 539 aaPredicted RBP8.51□□□□□ -1.05
GTF3C3-202ENST00000409364 ZFYVE9O95405 1425 aa8.5□□□□□ -1.05
GTF3C3-202ENST00000409364 KNSTRNQ9Y448 316 aa8.5□□□□□ -1.05
GTF3C3-202ENST00000409364 MYBBP1AQ9BQG0 1328 aaKnown RBP8.5□□□□□ -1.05
GTF3C3-202ENST00000409364 KIF1BO60333 1816 aa8.49□□□□□ -1.05
GTF3C3-202ENST00000409364 CNGB1Q14028 1251 aaPredicted RBP8.49□□□□□ -1.05
GTF3C3-202ENST00000409364 MLECQ14165 292 aa8.49□□□□□ -1.05
GTF3C3-202ENST00000409364 PIK3C2GO75747 1445 aa8.49□□□□□ -1.05
GTF3C3-202ENST00000409364 CAMSAP1Q5T5Y3 1602 aa8.49□□□□□ -1.05
GTF3C3-202ENST00000409364 ZC3H13Q5T200 1668 aaKnown RBP8.49□□□□□ -1.05
GTF3C3-202ENST00000409364 KIAA1210Q9ULL0 1709 aa8.49□□□□□ -1.05
GTF3C3-202ENST00000409364 NLRP13Q86W25 1043 aa8.49□□□□□ -1.05
GTF3C3-202ENST00000409364 PNISRQ8TF01 805 aaKnown RBP8.49□□□□□ -1.05
GTF3C3-202ENST00000409364 PUS7Q96PZ0 661 aaKnown RBP8.49□□□□□ -1.05
GTF3C3-202ENST00000409364 CENPJQ9HC77 1338 aaPredicted RBP8.49□□□□□ -1.05
GTF3C3-202ENST00000409364 BRD4O60885 1362 aaPredicted RBP8.48□□□□□ -1.05
GTF3C3-202ENST00000409364 SBNO2Q9Y2G9 1366 aa8.48□□□□□ -1.05
GTF3C3-202ENST00000409364 HDGFP51858 240 aaKnown RBP8.48□□□□□ -1.05
GTF3C3-202ENST00000409364 TMEM132EQ6IEE7 984 aa8.48□□□□□ -1.05
GTF3C3-202ENST00000409364 TRAK1Q9UPV9 953 aa8.48□□□□□ -1.05
GTF3C3-202ENST00000409364 ZMYM3Q14202 1370 aa8.46□□□□□ -1.05
GTF3C3-202ENST00000409364 PARD3Q8TEW0 1356 aa8.46□□□□□ -1.05
GTF3C3-202ENST00000409364 NUTM2DQ5VT03 806 aaPredicted RBP8.46□□□□□ -1.05
GTF3C3-202ENST00000409364 SYNMO15061 1565 aa8.46□□□□□ -1.06
GTF3C3-202ENST00000409364 SETBP1Q9Y6X0 1596 aa8.46□□□□□ -1.06
GTF3C3-202ENST00000409364 ERVK-7P63135 1459 aa8.46□□□□□ -1.06
GTF3C3-202ENST00000409364 ZBED9Q6R2W3 1325 aa8.46□□□□□ -1.06
GTF3C3-202ENST00000409364 CC2D1BQ5T0F9 858 aaKnown RBP8.46□□□□□ -1.06
GTF3C3-202ENST00000409364 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.46□□□□□ -1.06
GTF3C3-202ENST00000409364 MARVELD3Q96A59 401 aa8.46□□□□□ -1.06
GTF3C3-202ENST00000409364 BMP2KQ9NSY1 1161 aaPredicted RBP8.46□□□□□ -1.06
GTF3C3-202ENST00000409364 PIK3C2BO00750 1634 aa8.46□□□□□ -1.06
GTF3C3-202ENST00000409364 NPC1L1Q9UHC9 1359 aa8.45□□□□□ -1.06
GTF3C3-202ENST00000409364 TIE1P35590 1138 aa8.45□□□□□ -1.06
GTF3C3-202ENST00000409364 IER5LQ5T953 404 aa8.45□□□□□ -1.06
GTF3C3-202ENST00000409364 COLQQ9Y215 455 aaPredicted RBP8.45□□□□□ -1.06
GTF3C3-202ENST00000409364 SIGLEC1Q9BZZ2 1709 aa8.45□□□□□ -1.06
GTF3C3-202ENST00000409364 IQGAP1P46940 1657 aa8.44□□□□□ -1.06
GTF3C3-202ENST00000409364 AMER1Q5JTC6 1135 aaPredicted RBP8.44□□□□□ -1.06
GTF3C3-202ENST00000409364 CFAP65Q6ZU64 1925 aaKnown RBP8.44□□□□□ -1.06
GTF3C3-202ENST00000409364 EVC2Q86UK5 1308 aa8.44□□□□□ -1.06
GTF3C3-202ENST00000409364 NEFLP07196 543 aa8.43□□□□□ -1.06
GTF3C3-202ENST00000409364 KRTAP3-3Q9BYR6 98 aa8.43□□□□□ -1.06
GTF3C3-202ENST00000409364 KRTAP3-2Q9BYR7 98 aa8.43□□□□□ -1.06
GTF3C3-202ENST00000409364 DAXXQ9UER7 740 aaPredicted RBP8.43□□□□□ -1.06
GTF3C3-202ENST00000409364 IFT172Q9UG01 1749 aa8.43□□□□□ -1.06
GTF3C3-202ENST00000409364 NEXMIFQ5QGS0 1516 aa8.43□□□□□ -1.06
GTF3C3-202ENST00000409364 ARHGEF40Q8TER5 1519 aa8.43□□□□□ -1.06
GTF3C3-202ENST00000409364 MROH2AA6NES4 1674 aa8.43□□□□□ -1.06
GTF3C3-202ENST00000409364 ADGRB1O14514 1584 aa8.42□□□□□ -1.06
GTF3C3-202ENST00000409364 STK26Q9P289 416 aa8.42□□□□□ -1.06
GTF3C3-202ENST00000409364 LRPPRCP42704 1394 aaKnown RBP8.42□□□□□ -1.06
GTF3C3-202ENST00000409364 PPLO60437 1756 aa8.42□□□□□ -1.06
GTF3C3-202ENST00000409364 RNF166Q96A37 237 aaPredicted RBP8.41□□□□□ -1.06
GTF3C3-202ENST00000409364 POGKQ9P215 609 aa8.41□□□□□ -1.06
GTF3C3-202ENST00000409364 SUPT16HQ9Y5B9 1047 aaKnown RBP8.41□□□□□ -1.06
GTF3C3-202ENST00000409364 PREX1Q8TCU6 1659 aa8.41□□□□□ -1.06
GTF3C3-202ENST00000409364 INSRP06213 1382 aa8.41□□□□□ -1.06
GTF3C3-202ENST00000409364 TMEM131LA2VDJ0 1609 aa8.41□□□□□ -1.06
GTF3C3-202ENST00000409364 SPATA31D1Q6ZQQ2 1576 aa8.41□□□□□ -1.06
GTF3C3-202ENST00000409364 PPP2R1AP30153 589 aa8.4□□□□□ -1.06
GTF3C3-202ENST00000409364 EMP3P54852 163 aa8.4□□□□□ -1.06
GTF3C3-202ENST00000409364 CARD14Q9BXL6 1004 aa8.4□□□□□ -1.06
GTF3C3-202ENST00000409364 TNRQ92752 1358 aa8.4□□□□□ -1.06
GTF3C3-202ENST00000409364 A2ML1A8K2U0 1454 aa8.4□□□□□ -1.06
GTF3C3-202ENST00000409364 RIMS2Q9UQ26 1411 aa8.4□□□□□ -1.06
GTF3C3-202ENST00000409364 SLC12A5Q9H2X9 1139 aa8.4□□□□□ -1.07
GTF3C3-202ENST00000409364 FKBP8Q14318 412 aa8.39□□□□□ -1.07
GTF3C3-202ENST00000409364 PRAM1Q96QH2 718 aa8.39□□□□□ -1.07
GTF3C3-202ENST00000409364 ASXL1Q8IXJ9 1541 aa8.39□□□□□ -1.07
GTF3C3-202ENST00000409364 YTHDC2Q9H6S0 1430 aaKnown RBP8.39□□□□□ -1.07
GTF3C3-202ENST00000409364 ERICH6BQ5W0A0 696 aa8.38□□□□□ -1.07
GTF3C3-202ENST00000409364 SIRT1Q96EB6 747 aa8.38□□□□□ -1.07
GTF3C3-202ENST00000409364 MYO3AQ8NEV4 1616 aa8.38□□□□□ -1.07
GTF3C3-202ENST00000409364 ABCC11Q96J66 1382 aa8.38□□□□□ -1.07
GTF3C3-202ENST00000409364 NINLQ9Y2I6 1382 aa8.38□□□□□ -1.07
GTF3C3-202ENST00000409364 SRPK2P78362 688 aaKnown RBP8.37□□□□□ -1.07
GTF3C3-202ENST00000409364 PDE3BQ13370 1112 aa8.37□□□□□ -1.07
GTF3C3-202ENST00000409364 CLTCQ00610 1675 aaKnown RBP8.37□□□□□ -1.07
GTF3C3-202ENST00000409364 SAFB2Q14151 953 aaKnown RBP eCLIP8.37□□□□□ -1.07
GTF3C3-202ENST00000409364 WDR43Q15061 677 aaKnown RBP eCLIP8.37□□□□□ -1.07
GTF3C3-202ENST00000409364 CABP2Q9NPB3 220 aa8.37□□□□□ -1.07
GTF3C3-202ENST00000409364 CGNL1Q0VF96 1302 aa8.36□□□□□ -1.07
GTF3C3-202ENST00000409364 TMEM2Q9UHN6 1383 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms