RNA–Protein interactions for RNA: ENST00000407004.7

ILF3-202, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 1 (best) BASIC

Gene ILF3, Length 3,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-202ENST00000407004 HNRNPUQ00839 825 aaKnown RBP eCLIP16.25■□□□□ 0.19
ILF3-202ENST00000407004 ARXQ96QS3 562 aa16.25■□□□□ 0.19
ILF3-202ENST00000407004 ZBTB47Q9UFB7 747 aaPredicted RBP16.24■□□□□ 0.19
ILF3-202ENST00000407004 VGFO15240 615 aaPredicted RBP16.24■□□□□ 0.19
ILF3-202ENST00000407004 ADAMTS13Q76LX8 1427 aa16.24■□□□□ 0.19
ILF3-202ENST00000407004 ANP32AP39687 249 aaKnown RBP16.23■□□□□ 0.19
ILF3-202ENST00000407004 THEMISQ8N1K5 641 aaPredicted RBP16.23■□□□□ 0.19
ILF3-202ENST00000407004 PTCH1Q13635 1447 aa16.22■□□□□ 0.19
ILF3-202ENST00000407004 C14orf93Q9H972 538 aaKnown RBP16.22■□□□□ 0.19
ILF3-202ENST00000407004 FAM135BQ49AJ0 1406 aa16.21■□□□□ 0.19
ILF3-202ENST00000407004 MLECQ14165 292 aa16.21■□□□□ 0.18
ILF3-202ENST00000407004 PPP4R2Q9NY27 417 aa16.2■□□□□ 0.18
ILF3-202ENST00000407004 NCOA3Q9Y6Q9 1424 aa16.2■□□□□ 0.18
ILF3-202ENST00000407004 NKTRP30414 1462 aaKnown RBP16.19■□□□□ 0.18
ILF3-202ENST00000407004 QRICH2Q9H0J4 1663 aa16.17■□□□□ 0.18
ILF3-202ENST00000407004 LRPPRCP42704 1394 aaKnown RBP16.17■□□□□ 0.18
ILF3-202ENST00000407004 ABCC11Q96J66 1382 aa16.16■□□□□ 0.18
ILF3-202ENST00000407004 NPHP4O75161 1426 aaPredicted RBP16.15■□□□□ 0.18
ILF3-202ENST00000407004 CHMP4BQ9H444 224 aaKnown RBP16.15■□□□□ 0.18
ILF3-202ENST00000407004 PUS7Q96PZ0 661 aaKnown RBP16.15■□□□□ 0.18
ILF3-202ENST00000407004 TBX22Q9Y458 520 aa16.14■□□□□ 0.17
ILF3-202ENST00000407004 LAS1LQ9Y4W2 734 aaKnown RBP16.14■□□□□ 0.17
ILF3-202ENST00000407004 CCER2I3L3R5 266 aa16.13■□□□□ 0.17
ILF3-202ENST00000407004 NBPF8Q3BBV2 869 aa16.13■□□□□ 0.17
ILF3-202ENST00000407004 IPO9Q96P70 1041 aaKnown RBP16.13■□□□□ 0.17
ILF3-202ENST00000407004 EIF3AQ14152 1382 aaKnown RBP16.13■□□□□ 0.17
ILF3-202ENST00000407004 NEFMP07197 916 aa16.13■□□□□ 0.17
ILF3-202ENST00000407004 ADGRF5Q8IZF2 1346 aa16.12■□□□□ 0.17
ILF3-202ENST00000407004 NPM2Q86SE8 214 aaKnown RBP16.12■□□□□ 0.17
ILF3-202ENST00000407004 BRPF3Q9ULD4 1205 aa16.12■□□□□ 0.17
ILF3-202ENST00000407004 TOPAZ1Q8N9V7 1692 aa16.11■□□□□ 0.17
ILF3-202ENST00000407004 CEBPAP49715 358 aaPredicted RBP16.11■□□□□ 0.17
ILF3-202ENST00000407004 YTHDC2Q9H6S0 1430 aaKnown RBP16.11■□□□□ 0.17
ILF3-202ENST00000407004 DCAF11Q8TEB1 546 aa16.1■□□□□ 0.17
ILF3-202ENST00000407004 NAP1L5Q96NT1 182 aaPredicted RBP16.1■□□□□ 0.17
ILF3-202ENST00000407004 CDC42BPGQ6DT37 1551 aa16.1■□□□□ 0.17
ILF3-202ENST00000407004 IQSEC2Q5JU85 1478 aa16.09■□□□□ 0.17
ILF3-202ENST00000407004 EID1Q9Y6B2 187 aa16.09■□□□□ 0.17
ILF3-202ENST00000407004 USP32Q8NFA0 1604 aa16.07■□□□□ 0.16
ILF3-202ENST00000407004 ANKLE2Q86XL3 938 aa16.07■□□□□ 0.16
ILF3-202ENST00000407004 ROCK2O75116 1388 aaKnown RBP16.07■□□□□ 0.16
ILF3-202ENST00000407004 STRCP1A6NGW2 1772 aa16.07■□□□□ 0.16
ILF3-202ENST00000407004 ITSN1Q15811 1721 aa16.06■□□□□ 0.16
ILF3-202ENST00000407004 MYOM1P52179 1685 aa16.06■□□□□ 0.16
ILF3-202ENST00000407004 FMN2Q9NZ56 1722 aa16.06■□□□□ 0.16
ILF3-202ENST00000407004 USP54Q70EL1 1684 aa16.05■□□□□ 0.16
ILF3-202ENST00000407004 DCCP43146 1447 aa16.05■□□□□ 0.16
ILF3-202ENST00000407004 LTKP29376 864 aa16.05■□□□□ 0.16
ILF3-202ENST00000407004 XIRP1Q702N8 1843 aaKnown RBP16.05■□□□□ 0.16
ILF3-202ENST00000407004 C14orf37Q86TY3 774 aa16.04■□□□□ 0.16
ILF3-202ENST00000407004 PTPRUQ92729 1446 aa16.04■□□□□ 0.16
ILF3-202ENST00000407004 USP47Q96K76 1375 aa16.04■□□□□ 0.16
ILF3-202ENST00000407004 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.03■□□□□ 0.16
ILF3-202ENST00000407004 NALCNQ8IZF0 1738 aa16.02■□□□□ 0.16
ILF3-202ENST00000407004 NAP1L2Q9ULW6 460 aaPredicted RBP16.02■□□□□ 0.16
ILF3-202ENST00000407004 ZNF326Q5BKZ1 582 aaKnown RBP16.02■□□□□ 0.15
ILF3-202ENST00000407004 NINLQ9Y2I6 1382 aa16.01■□□□□ 0.15
ILF3-202ENST00000407004 STAG3Q9UJ98 1225 aa16.01■□□□□ 0.15
ILF3-202ENST00000407004 TXNDC2Q86VQ3 553 aa16■□□□□ 0.15
ILF3-202ENST00000407004 TULP4Q9NRJ4 1543 aa16■□□□□ 0.15
ILF3-202ENST00000407004 METP08581 1390 aa16■□□□□ 0.15
ILF3-202ENST00000407004 ANKARQ7Z5J8 1434 aa15.99■□□□□ 0.15
ILF3-202ENST00000407004 AKAP12Q02952 1782 aa15.98■□□□□ 0.15
ILF3-202ENST00000407004 SAMD1Q6SPF0 538 aaPredicted RBP15.98■□□□□ 0.15
ILF3-202ENST00000407004 DMRT2Q9Y5R5 561 aa15.98■□□□□ 0.15
ILF3-202ENST00000407004 LRRC7Q96NW7 1537 aa15.98■□□□□ 0.15
ILF3-202ENST00000407004 LTBP4Q8N2S1 1624 aa15.98■□□□□ 0.15
ILF3-202ENST00000407004 KIF1AQ12756 1690 aa15.98■□□□□ 0.15
ILF3-202ENST00000407004 RGL3Q3MIN7 710 aa15.98■□□□□ 0.15
ILF3-202ENST00000407004 EIF4G2P78344 907 aaKnown RBP eCLIP15.97■□□□□ 0.15
ILF3-202ENST00000407004 BBXQ8WY36 941 aaPredicted RBP15.97■□□□□ 0.15
ILF3-202ENST00000407004 RSPH6AQ9H0K4 717 aa15.96■□□□□ 0.15
ILF3-202ENST00000407004 WASHC2AQ641Q2 1341 aa15.96■□□□□ 0.15
ILF3-202ENST00000407004 TESK2Q96S53 571 aa15.96■□□□□ 0.14
ILF3-202ENST00000407004 CFAP70Q5T0N1 1121 aa15.95■□□□□ 0.14
ILF3-202ENST00000407004 MON2Q7Z3U7 1717 aa15.95■□□□□ 0.14
ILF3-202ENST00000407004 KCNA6P17658 529 aa15.94■□□□□ 0.14
ILF3-202ENST00000407004 NRKQ7Z2Y5 1582 aa15.94■□□□□ 0.14
ILF3-202ENST00000407004 ADGRL3Q9HAR2 1447 aa15.94■□□□□ 0.14
ILF3-202ENST00000407004 CARD11Q9BXL7 1154 aa15.93■□□□□ 0.14
ILF3-202ENST00000407004 C11orf95C9JLR9 678 aaPredicted RBP15.93■□□□□ 0.14
ILF3-202ENST00000407004 CHGAP10645 457 aaKnown RBP15.93■□□□□ 0.14
ILF3-202ENST00000407004 AMER1Q5JTC6 1135 aaPredicted RBP15.93■□□□□ 0.14
ILF3-202ENST00000407004 BRD4O60885 1362 aaPredicted RBP15.93■□□□□ 0.14
ILF3-202ENST00000407004 MST1RQ04912 1400 aa15.93■□□□□ 0.14
ILF3-202ENST00000407004 ANKRD26Q9UPS8 1709 aa15.93■□□□□ 0.14
ILF3-202ENST00000407004 NBPF1Q3BBV0 1214 aa15.92■□□□□ 0.14
ILF3-202ENST00000407004 BRD2P25440 801 aaKnown RBP15.91■□□□□ 0.14
ILF3-202ENST00000407004 FAM9BQ8IZU0 186 aa15.91■□□□□ 0.14
ILF3-202ENST00000407004 ATP7BP35670 1465 aa15.91■□□□□ 0.14
ILF3-202ENST00000407004 USP35Q9P2H5 1018 aa15.91■□□□□ 0.14
ILF3-202ENST00000407004 PLCD3Q8N3E9 789 aa15.9■□□□□ 0.14
ILF3-202ENST00000407004 CENPJQ9HC77 1338 aaPredicted RBP15.9■□□□□ 0.14
ILF3-202ENST00000407004 HOMEZQ8IX15 550 aa15.9■□□□□ 0.14
ILF3-202ENST00000407004 ROBO2Q9HCK4 1378 aa15.9■□□□□ 0.14
ILF3-202ENST00000407004 CDCA8Q53HL2 280 aa15.89■□□□□ 0.13
ILF3-202ENST00000407004 HSPA5P11021 654 aaKnown RBP15.89■□□□□ 0.13
ILF3-202ENST00000407004 GSE1Q14687 1217 aa15.89■□□□□ 0.13
ILF3-202ENST00000407004 KDM2AQ9Y2K7 1162 aa15.89■□□□□ 0.13
ILF3-202ENST00000407004 CCDC7Q96M83 1385 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms