RNA–Protein interactions for RNA: ENST00000406772.5

GGA1-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2 BASIC

Gene GGA1, Length 3,205 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-206ENST00000406772 PIK3C2GO75747 1445 aa18.6■□□□□ 0.57
GGA1-206ENST00000406772 NSD3Q9BZ95 1437 aa18.6■□□□□ 0.57
GGA1-206ENST00000406772 SCAF11Q99590 1463 aaKnown RBP18.59■□□□□ 0.57
GGA1-206ENST00000406772 INSRP06213 1382 aa18.58■□□□□ 0.57
GGA1-206ENST00000406772 SAMD9LQ8IVG5 1584 aa18.58■□□□□ 0.57
GGA1-206ENST00000406772 APBB1O00213 710 aa18.58■□□□□ 0.56
GGA1-206ENST00000406772 TPRNQ4KMQ1 711 aa18.58■□□□□ 0.56
GGA1-206ENST00000406772 NOB1Q9ULX3 412 aaKnown RBP18.58■□□□□ 0.56
GGA1-206ENST00000406772 SSH1Q8WYL5 1049 aa18.57■□□□□ 0.56
GGA1-206ENST00000406772 GGNBP2Q9H3C7 697 aa18.57■□□□□ 0.56
GGA1-206ENST00000406772 TRIM27P14373 513 aa18.57■□□□□ 0.56
GGA1-206ENST00000406772 ANKRD45Q5TZF3 282 aa18.57■□□□□ 0.56
GGA1-206ENST00000406772 MRE11P49959 708 aa18.56■□□□□ 0.56
GGA1-206ENST00000406772 TMEM57Q8N5G2 664 aa18.56■□□□□ 0.56
GGA1-206ENST00000406772 RBM42Q9BTD8 480 aaKnown RBP18.56■□□□□ 0.56
GGA1-206ENST00000406772 CABP2Q9NPB3 220 aa18.55■□□□□ 0.56
GGA1-206ENST00000406772 GGT6Q6P531 493 aa18.55■□□□□ 0.56
GGA1-206ENST00000406772 ESPNB1AK53 854 aa18.54■□□□□ 0.56
GGA1-206ENST00000406772 FOXD4L5Q5VV16 416 aaPredicted RBP18.54■□□□□ 0.56
GGA1-206ENST00000406772 FOXD4L4Q8WXT5 416 aaPredicted RBP18.54■□□□□ 0.56
GGA1-206ENST00000406772 TNPO1Q92973 898 aaKnown RBP18.54■□□□□ 0.56
GGA1-206ENST00000406772 DDX11L8A8MPP1 907 aa18.53■□□□□ 0.56
GGA1-206ENST00000406772 SRPK2P78362 688 aaKnown RBP18.52■□□□□ 0.56
GGA1-206ENST00000406772 NUP160Q12769 1436 aa18.51■□□□□ 0.55
GGA1-206ENST00000406772 ABCA8O94911 1581 aa18.51■□□□□ 0.55
GGA1-206ENST00000406772 GAS2L3Q86XJ1 694 aa18.51■□□□□ 0.55
GGA1-206ENST00000406772 ANP32BQ92688 251 aaKnown RBP18.51■□□□□ 0.55
GGA1-206ENST00000406772 EIF2AK4Q9P2K8 1649 aaKnown RBP18.51■□□□□ 0.55
GGA1-206ENST00000406772 PKNOX2Q96KN3 472 aa18.51■□□□□ 0.55
GGA1-206ENST00000406772 GBP4Q96PP9 640 aa18.51■□□□□ 0.55
GGA1-206ENST00000406772 SLC24A1O60721 1099 aa18.5■□□□□ 0.55
GGA1-206ENST00000406772 FBLN1P23142 703 aa18.5■□□□□ 0.55
GGA1-206ENST00000406772 ERBB4Q15303 1308 aa18.5■□□□□ 0.55
GGA1-206ENST00000406772 RIPK4P57078 832 aa18.5■□□□□ 0.55
GGA1-206ENST00000406772 WDR63Q8IWG1 891 aa18.5■□□□□ 0.55
GGA1-206ENST00000406772 DDX19BQ9UMR2 479 aa18.5■□□□□ 0.55
GGA1-206ENST00000406772 TRAPPC8Q9Y2L5 1435 aa18.5■□□□□ 0.55
GGA1-206ENST00000406772 CLCN1P35523 988 aa18.49■□□□□ 0.55
GGA1-206ENST00000406772 MYO5CQ9NQX4 1742 aa18.49■□□□□ 0.55
GGA1-206ENST00000406772 KANK1Q14678 1352 aa18.49■□□□□ 0.55
GGA1-206ENST00000406772 ATF7IPQ6VMQ6 1270 aa18.49■□□□□ 0.55
GGA1-206ENST00000406772 THUMPD2Q9BTF0 503 aaKnown RBP18.49■□□□□ 0.55
GGA1-206ENST00000406772 DDX49Q9Y6V7 483 aaKnown RBP18.49■□□□□ 0.55
GGA1-206ENST00000406772 FSD2A1L4K1 749 aa18.48■□□□□ 0.55
GGA1-206ENST00000406772 NLRP1Q9C000 1473 aa18.48■□□□□ 0.55
GGA1-206ENST00000406772 NINLQ9Y2I6 1382 aa18.48■□□□□ 0.55
GGA1-206ENST00000406772 SSFA2P28290 1259 aa18.48■□□□□ 0.55
GGA1-206ENST00000406772 NGEFQ8N5V2 710 aa18.47■□□□□ 0.55
GGA1-206ENST00000406772 RBM10P98175 930 aaKnown RBP18.47■□□□□ 0.55
GGA1-206ENST00000406772 CD2BP2O95400 341 aaKnown RBP18.47■□□□□ 0.55
GGA1-206ENST00000406772 ZMYND15Q9H091 742 aa18.46■□□□□ 0.55
GGA1-206ENST00000406772 ARHGEF5Q12774 1597 aa18.46■□□□□ 0.55
GGA1-206ENST00000406772 GOLGA6L22H0YM25 854 aa18.45■□□□□ 0.54
GGA1-206ENST00000406772 UGGT1Q9NYU2 1555 aa18.44■□□□□ 0.54
GGA1-206ENST00000406772 ABCC2Q92887 1545 aa18.44■□□□□ 0.54
GGA1-206ENST00000406772 POLR3AO14802 1390 aaPredicted RBP18.44■□□□□ 0.54
GGA1-206ENST00000406772 FOXD4L6Q3SYB3 417 aaPredicted RBP18.44■□□□□ 0.54
GGA1-206ENST00000406772 FOXD4L3Q6VB84 417 aaPredicted RBP18.44■□□□□ 0.54
GGA1-206ENST00000406772 HMOX1P09601 288 aa18.44■□□□□ 0.54
GGA1-206ENST00000406772 TMPOP42166 694 aaKnown RBP18.44■□□□□ 0.54
GGA1-206ENST00000406772 CDC42BPBQ9Y5S2 1711 aa18.43■□□□□ 0.54
GGA1-206ENST00000406772 MCTP1Q6DN14 999 aa18.43■□□□□ 0.54
GGA1-206ENST00000406772 TTC37Q6PGP7 1564 aa18.43■□□□□ 0.54
GGA1-206ENST00000406772 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.43■□□□□ 0.54
GGA1-206ENST00000406772 ERVK-7P63135 1459 aa18.43■□□□□ 0.54
GGA1-206ENST00000406772 CHD1LQ86WJ1 897 aa18.42■□□□□ 0.54
GGA1-206ENST00000406772 NASPP49321 788 aaPredicted RBP18.42■□□□□ 0.54
GGA1-206ENST00000406772 NOL8Q76FK4 1167 aaKnown RBP18.42■□□□□ 0.54
GGA1-206ENST00000406772 MSNP26038 577 aaKnown RBP18.42■□□□□ 0.54
GGA1-206ENST00000406772 MINK1Q8N4C8 1332 aaPredicted RBP18.41■□□□□ 0.54
GGA1-206ENST00000406772 SYNMO15061 1565 aa18.41■□□□□ 0.54
GGA1-206ENST00000406772 SCAPERQ9BY12 1400 aa18.41■□□□□ 0.54
GGA1-206ENST00000406772 IPO8O15397 1037 aaKnown RBP18.41■□□□□ 0.54
GGA1-206ENST00000406772 CAVIN1Q6NZI2 390 aaKnown RBP18.41■□□□□ 0.54
GGA1-206ENST00000406772 MPNDQ8N594 471 aa18.41■□□□□ 0.54
GGA1-206ENST00000406772 KIAA1211Q6ZU35 1233 aa18.4■□□□□ 0.54
GGA1-206ENST00000406772 MAST1Q9Y2H9 1570 aa18.4■□□□□ 0.54
GGA1-206ENST00000406772 DUOX2Q9NRD8 1548 aa18.4■□□□□ 0.54
GGA1-206ENST00000406772 NPC1L1Q9UHC9 1359 aa18.4■□□□□ 0.54
GGA1-206ENST00000406772 GAS2L2Q8NHY3 880 aa18.4■□□□□ 0.54
GGA1-206ENST00000406772 CHAMP1Q96JM3 812 aa18.4■□□□□ 0.54
GGA1-206ENST00000406772 ATP10AO60312 1499 aa18.39■□□□□ 0.53
GGA1-206ENST00000406772 NOS1P29475 1434 aa18.39■□□□□ 0.53
GGA1-206ENST00000406772 FAM13BQ9NYF5 915 aa18.38■□□□□ 0.53
GGA1-206ENST00000406772 CFAP65Q6ZU64 1925 aaKnown RBP18.38■□□□□ 0.53
GGA1-206ENST00000406772 AAMPQ13685 434 aa18.38■□□□□ 0.53
GGA1-206ENST00000406772 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.37■□□□□ 0.53
GGA1-206ENST00000406772 TBC1D9Q6ZT07 1266 aa18.37■□□□□ 0.53
GGA1-206ENST00000406772 R3HCC1Q9Y3T6 440 aaKnown RBP18.37■□□□□ 0.53
GGA1-206ENST00000406772 K7ELQ4 463 aaPredicted RBP18.36■□□□□ 0.53
GGA1-206ENST00000406772 HDAC1Q13547 482 aaPredicted RBP18.36■□□□□ 0.53
GGA1-206ENST00000406772 MADDQ8WXG6 1647 aa18.36■□□□□ 0.53
GGA1-206ENST00000406772 SMC5Q8IY18 1101 aa18.36■□□□□ 0.53
GGA1-206ENST00000406772 RNF214Q8ND24 703 aa18.35■□□□□ 0.53
GGA1-206ENST00000406772 ZNF692Q9BU19 519 aaPredicted RBP18.35■□□□□ 0.53
GGA1-206ENST00000406772 ZBTB40Q9NUA8 1239 aa18.35■□□□□ 0.53
GGA1-206ENST00000406772 TRIM35Q9UPQ4 493 aa18.35■□□□□ 0.53
GGA1-206ENST00000406772 PREX2Q70Z35 1606 aa18.35■□□□□ 0.53
GGA1-206ENST00000406772 CALD1Q05682 793 aaKnown RBP18.35■□□□□ 0.53
GGA1-206ENST00000406772 CLASP1Q7Z460 1538 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms