RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 ISY1Q9ULR0 285 aaKnown RBP3.33□□□□□ -1.88
CHD9-202ENST00000398510 ERBINQ96RT1 1412 aa3.33□□□□□ -1.88
CHD9-202ENST00000398510 EVA1CP58658 441 aa3.32□□□□□ -1.88
CHD9-202ENST00000398510 INO80Q9ULG1 1556 aaPredicted RBP3.32□□□□□ -1.88
CHD9-202ENST00000398510 AMPHP49418 695 aa3.32□□□□□ -1.88
CHD9-202ENST00000398510 CNGB1Q14028 1251 aaPredicted RBP3.32□□□□□ -1.88
CHD9-202ENST00000398510 RBM33Q96EV2 1170 aaKnown RBP3.32□□□□□ -1.88
CHD9-202ENST00000398510 DNMT1P26358 1616 aaKnown RBP3.32□□□□□ -1.88
CHD9-202ENST00000398510 PREX2Q70Z35 1606 aa3.32□□□□□ -1.88
CHD9-202ENST00000398510 NAT10Q9H0A0 1025 aaKnown RBP3.32□□□□□ -1.88
CHD9-202ENST00000398510 DHX16O60231 1041 aaKnown RBP3.32□□□□□ -1.88
CHD9-202ENST00000398510 ERC2O15083 957 aa3.32□□□□□ -1.88
CHD9-202ENST00000398510 KIF4AO95239 1232 aa3.32□□□□□ -1.88
CHD9-202ENST00000398510 RWDD1Q9H446 243 aaPredicted RBP3.32□□□□□ -1.88
CHD9-202ENST00000398510 FGD6Q6ZV73 1430 aa3.32□□□□□ -1.88
CHD9-202ENST00000398510 TRIM29Q14134 588 aa3.32□□□□□ -1.88
CHD9-202ENST00000398510 ZNF652Q9Y2D9 606 aa3.32□□□□□ -1.88
CHD9-202ENST00000398510 BICRAQ9NZM4 1560 aa3.32□□□□□ -1.88
CHD9-202ENST00000398510 KIF3BO15066 747 aa3.32□□□□□ -1.88
CHD9-202ENST00000398510 PAK3O75914 559 aaPredicted RBP3.32□□□□□ -1.88
CHD9-202ENST00000398510 NSD3Q9BZ95 1437 aa3.32□□□□□ -1.88
CHD9-202ENST00000398510 MYH11P35749 1972 aa3.31□□□□□ -1.88
CHD9-202ENST00000398510 ADGRL1O94910 1474 aa3.31□□□□□ -1.88
CHD9-202ENST00000398510 GRIN2AQ12879 1464 aa3.31□□□□□ -1.88
CHD9-202ENST00000398510 CT47B1P0C2W7 299 aaPredicted RBP3.31□□□□□ -1.88
CHD9-202ENST00000398510 ODF2Q5BJF6 829 aa3.31□□□□□ -1.88
CHD9-202ENST00000398510 LRRCC1Q9C099 1032 aa3.31□□□□□ -1.88
CHD9-202ENST00000398510 SHANK2Q9UPX8 1470 aa3.31□□□□□ -1.88
CHD9-202ENST00000398510 NSD2O96028 1365 aa3.31□□□□□ -1.88
CHD9-202ENST00000398510 TPRNQ4KMQ1 711 aa3.31□□□□□ -1.88
CHD9-202ENST00000398510 LRRC9Q6ZRR7 1453 aa3.31□□□□□ -1.88
CHD9-202ENST00000398510 CDC42BPBQ9Y5S2 1711 aa3.31□□□□□ -1.88
CHD9-202ENST00000398510 CCP110O43303 1012 aa3.31□□□□□ -1.88
CHD9-202ENST00000398510 TRDNQ13061 729 aa3.31□□□□□ -1.88
CHD9-202ENST00000398510 KIF6Q6ZMV9 814 aa3.31□□□□□ -1.88
CHD9-202ENST00000398510 ZNF428Q96B54 188 aa3.31□□□□□ -1.88
CHD9-202ENST00000398510 CDC42BPGQ6DT37 1551 aa3.31□□□□□ -1.88
CHD9-202ENST00000398510 ATAD2Q6PL18 1390 aa3.31□□□□□ -1.88
CHD9-202ENST00000398510 ABCA6Q8N139 1617 aa3.31□□□□□ -1.88
CHD9-202ENST00000398510 SLF2Q8IX21 1173 aa3.31□□□□□ -1.88
CHD9-202ENST00000398510 DNAJC5Q9H3Z4 198 aa3.31□□□□□ -1.88
CHD9-202ENST00000398510 PRM3Q9NNZ6 103 aa3.31□□□□□ -1.88
CHD9-202ENST00000398510 SLC52A1Q9NWF4 448 aa3.31□□□□□ -1.88
CHD9-202ENST00000398510 PLEKHH1Q9ULM0 1364 aa3.31□□□□□ -1.88
CHD9-202ENST00000398510 MAP3K9P80192 1104 aa3.31□□□□□ -1.88
CHD9-202ENST00000398510 DCTN1Q14203 1278 aa3.31□□□□□ -1.88
CHD9-202ENST00000398510 DRC7Q8IY82 874 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 KDM2AQ9Y2K7 1162 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 KIF20BQ96Q89 1820 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 TET3O43151 1660 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 CERS3Q8IU89 383 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 HAUS2Q9NVX0 235 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 CHMP5Q9NZZ3 219 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 C9orf84Q5VXU9 1444 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 LRRIQ1Q96JM4 1722 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 TEFQ10587 303 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 AXDND1Q5T1B0 1012 aaPredicted RBP3.3□□□□□ -1.88
CHD9-202ENST00000398510 TRPM2O94759 1503 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 PRG4Q92954 1404 aaPredicted RBP3.3□□□□□ -1.88
CHD9-202ENST00000398510 DDX11L8A8MPP1 907 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 ARHGEF12Q9NZN5 1544 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 PPP1R12BO60237 982 aaPredicted RBP3.3□□□□□ -1.88
CHD9-202ENST00000398510 MARCH6O60337 910 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.3□□□□□ -1.88
CHD9-202ENST00000398510 RPGRIP1LQ68CZ1 1315 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 SKOR2Q2VWA4 1001 aaPredicted RBP3.3□□□□□ -1.88
CHD9-202ENST00000398510 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.3□□□□□ -1.889e-7■■■■□ 21.2
CHD9-202ENST00000398510 CHIC2Q9UKJ5 165 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 KAT6AQ92794 2004 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 RALGAPBQ86X10 1494 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 IQCEQ6IPM2 695 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 ZKSCAN1P17029 563 aaPredicted RBP3.3□□□□□ -1.88
CHD9-202ENST00000398510 PSMA5P28066 241 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 TRAF1Q13077 416 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 FERMT1Q9BQL6 677 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 ACBD3Q9H3P7 528 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 TROQ12816 1431 aaPredicted RBP3.3□□□□□ -1.88
CHD9-202ENST00000398510 MYH13Q9UKX3 1938 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 TNNT3P45378 269 aaPredicted RBP3.3□□□□□ -1.88
CHD9-202ENST00000398510 VPS53Q5VIR6 699 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 HOOK3Q86VS8 718 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 MYH8P13535 1937 aa3.3□□□□□ -1.88
CHD9-202ENST00000398510 CLASP1Q7Z460 1538 aa3.29□□□□□ -1.88
CHD9-202ENST00000398510 QRICH2Q9H0J4 1663 aa3.29□□□□□ -1.88
CHD9-202ENST00000398510 U2SURPO15042 1029 aaKnown RBP3.29□□□□□ -1.88
CHD9-202ENST00000398510 VIMP08670 466 aaKnown RBP3.29□□□□□ -1.88
CHD9-202ENST00000398510 ATXN8OSP0DMR3 200 aa3.29□□□□□ -1.88
CHD9-202ENST00000398510 TXLNAP40222 546 aa3.29□□□□□ -1.88
CHD9-202ENST00000398510 SAFBQ15424 915 aaKnown RBP eCLIP3.29□□□□□ -1.88
CHD9-202ENST00000398510 EHMT1Q9H9B1 1298 aa3.29□□□□□ -1.88
CHD9-202ENST00000398510 ARAP1Q96P48 1450 aa3.29□□□□□ -1.88
CHD9-202ENST00000398510 PDCP20941 246 aa3.29□□□□□ -1.88
CHD9-202ENST00000398510 FAM9BQ8IZU0 186 aa3.29□□□□□ -1.88
CHD9-202ENST00000398510 DCAF11Q8TEB1 546 aa3.29□□□□□ -1.88
CHD9-202ENST00000398510 PNISRQ8TF01 805 aaKnown RBP3.29□□□□□ -1.88
CHD9-202ENST00000398510 ZNHIT6Q9NWK9 470 aaKnown RBP3.29□□□□□ -1.88
CHD9-202ENST00000398510 RBM27Q9P2N5 1060 aaKnown RBP3.29□□□□□ -1.88
CHD9-202ENST00000398510 B4DLN1 442 aa3.29□□□□□ -1.88
CHD9-202ENST00000398510 MRPL12P52815 198 aaKnown RBP3.29□□□□□ -1.88
CHD9-202ENST00000398510 PPP4R3AQ6IN85 833 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms