RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 CFAP70Q5T0N1 1121 aa22.07■■□□□ 1.12
EWSR1-206ENST00000397938 RWDD1Q9H446 243 aaPredicted RBP22.07■■□□□ 1.12
EWSR1-206ENST00000397938 RTEL1-TNFRSF6BF6WH68 1400 aa22.07■■□□□ 1.12
EWSR1-206ENST00000397938 WDR63Q8IWG1 891 aa22.07■■□□□ 1.12
EWSR1-206ENST00000397938 SBNO2Q9Y2G9 1366 aa22.06■■□□□ 1.12
EWSR1-206ENST00000397938 MCM4P33991 863 aa22.06■■□□□ 1.12
EWSR1-206ENST00000397938 NEUROD2Q15784 382 aa22.06■■□□□ 1.12
EWSR1-206ENST00000397938 RRP7AQ9Y3A4 280 aaKnown RBP22.06■■□□□ 1.12
EWSR1-206ENST00000397938 VWDEQ8N2E2 1590 aa22.06■■□□□ 1.12
EWSR1-206ENST00000397938 GOLGA6L3A6NEY3 463 aa22.05■■□□□ 1.12
EWSR1-206ENST00000397938 XRCC6P12956 609 aaKnown RBP eCLIP22.05■■□□□ 1.12
EWSR1-206ENST00000397938 TCP11L2Q8N4U5 519 aa22.05■■□□□ 1.12
EWSR1-206ENST00000397938 KANK1Q14678 1352 aa22.05■■□□□ 1.12
EWSR1-206ENST00000397938 IFT172Q9UG01 1749 aa22.04■■□□□ 1.12
EWSR1-206ENST00000397938 SPAG9O60271 1321 aaKnown RBP22.04■■□□□ 1.12
EWSR1-206ENST00000397938 NSD3Q9BZ95 1437 aa22.04■■□□□ 1.12
EWSR1-206ENST00000397938 BCL2L13Q9BXK5 485 aa22.03■■□□□ 1.12
EWSR1-206ENST00000397938 CCDC27Q2M243 656 aa22.02■■□□□ 1.12
EWSR1-206ENST00000397938 MORC1Q86VD1 984 aa22.02■■□□□ 1.12
EWSR1-206ENST00000397938 ADGRF5Q8IZF2 1346 aa22.02■■□□□ 1.11
EWSR1-206ENST00000397938 MVPQ14764 893 aaKnown RBP22.01■■□□□ 1.11
EWSR1-206ENST00000397938 CHMP5Q9NZZ3 219 aa22.01■■□□□ 1.11
EWSR1-206ENST00000397938 KIF1BO60333 1816 aa22■■□□□ 1.11
EWSR1-206ENST00000397938 UGGT1Q9NYU2 1555 aa21.99■■□□□ 1.11
EWSR1-206ENST00000397938 SPRYD3Q8NCJ5 442 aa21.99■■□□□ 1.11
EWSR1-206ENST00000397938 CHD1O14646 1710 aa21.99■■□□□ 1.11
EWSR1-206ENST00000397938 ZCCHC11Q5TAX3 1644 aaKnown RBP21.99■■□□□ 1.11
EWSR1-206ENST00000397938 USP32Q8NFA0 1604 aa21.99■■□□□ 1.11
EWSR1-206ENST00000397938 ZNF518AQ6AHZ1 1483 aa21.99■■□□□ 1.11
EWSR1-206ENST00000397938 ARXQ96QS3 562 aa21.99■■□□□ 1.11
EWSR1-206ENST00000397938 C22orf23Q9BZE7 217 aa21.99■■□□□ 1.11
EWSR1-206ENST00000397938 NRXN1Q9ULB1 1477 aa21.98■■□□□ 1.11
EWSR1-206ENST00000397938 ZC3H13Q5T200 1668 aaKnown RBP21.98■■□□□ 1.11
EWSR1-206ENST00000397938 MYH16Q9H6N6 1097 aa21.97■■□□□ 1.11
EWSR1-206ENST00000397938 PANK2Q9BZ23 570 aa21.97■■□□□ 1.11
EWSR1-206ENST00000397938 ERCC6L2Q5T890 1561 aa21.97■■□□□ 1.11
EWSR1-206ENST00000397938 NCBP3Q53F19 620 aaKnown RBP21.96■■□□□ 1.11
EWSR1-206ENST00000397938 GZF1Q9H116 711 aaPredicted RBP21.96■■□□□ 1.11
EWSR1-206ENST00000397938 MROH2AA6NES4 1674 aa21.96■■□□□ 1.11
EWSR1-206ENST00000397938 TNNT2P45379 298 aaPredicted RBP21.96■■□□□ 1.11
EWSR1-206ENST00000397938 SETBP1Q9Y6X0 1596 aa21.95■■□□□ 1.11
EWSR1-206ENST00000397938 TRAK2O60296 914 aa21.95■■□□□ 1.1
EWSR1-206ENST00000397938 CLCN1P35523 988 aa21.95■■□□□ 1.1
EWSR1-206ENST00000397938 AFAP1Q8N556 730 aa21.95■■□□□ 1.1
EWSR1-206ENST00000397938 ZKSCAN2Q63HK3 967 aa21.95■■□□□ 1.1
EWSR1-206ENST00000397938 MFAP1P55081 439 aaKnown RBP21.94■■□□□ 1.1
EWSR1-206ENST00000397938 ADGRB2O60241 1585 aa21.94■■□□□ 1.1
EWSR1-206ENST00000397938 ARAP3Q8WWN8 1544 aa21.94■■□□□ 1.1
EWSR1-206ENST00000397938 INO80Q9ULG1 1556 aaPredicted RBP21.94■■□□□ 1.1
EWSR1-206ENST00000397938 DZIP1LQ8IYY4 767 aaKnown RBP21.93■■□□□ 1.1
EWSR1-206ENST00000397938 MROH1Q8NDA8 1641 aa21.93■■□□□ 1.1
EWSR1-206ENST00000397938 QRICH2Q9H0J4 1663 aa21.93■■□□□ 1.1
EWSR1-206ENST00000397938 ADGRL1O94910 1474 aa21.93■■□□□ 1.1
EWSR1-206ENST00000397938 ATP7AQ04656 1500 aa21.93■■□□□ 1.1
EWSR1-206ENST00000397938 FTSJ3Q8IY81 847 aaKnown RBP21.93■■□□□ 1.1
EWSR1-206ENST00000397938 MRE11P49959 708 aa21.92■■□□□ 1.1
EWSR1-206ENST00000397938 MTHFSP49914 203 aa21.92■■□□□ 1.1
EWSR1-206ENST00000397938 CFAP53Q96M91 514 aa21.92■■□□□ 1.1
EWSR1-206ENST00000397938 PNNQ9H307 717 aaKnown RBP21.92■■□□□ 1.1
EWSR1-206ENST00000397938 NCOA3Q9Y6Q9 1424 aa21.91■■□□□ 1.1
EWSR1-206ENST00000397938 HDAC1Q13547 482 aaPredicted RBP21.91■■□□□ 1.1
EWSR1-206ENST00000397938 ZNF692Q9BU19 519 aaPredicted RBP21.91■■□□□ 1.1
EWSR1-206ENST00000397938 SLC12A5Q9H2X9 1139 aa21.91■■□□□ 1.1
EWSR1-206ENST00000397938 DDX11L8A8MPP1 907 aa21.9■■□□□ 1.1
EWSR1-206ENST00000397938 CT47B1P0C2W7 299 aaPredicted RBP21.9■■□□□ 1.1
EWSR1-206ENST00000397938 HSCBQ8IWL3 235 aa21.9■■□□□ 1.1
EWSR1-206ENST00000397938 EFCAB6Q5THR3 1501 aa21.89■■□□□ 1.1
EWSR1-206ENST00000397938 KIF3BO15066 747 aa21.87■■□□□ 1.09
EWSR1-206ENST00000397938 NAP1L5Q96NT1 182 aaPredicted RBP21.87■■□□□ 1.09
EWSR1-206ENST00000397938 ISY1Q9ULR0 285 aaKnown RBP21.87■■□□□ 1.09
EWSR1-206ENST00000397938 ADGRB3O60242 1522 aa21.87■■□□□ 1.09
EWSR1-206ENST00000397938 NOS1P29475 1434 aa21.86■■□□□ 1.09
EWSR1-206ENST00000397938 DDIT3P35638 169 aa21.86■■□□□ 1.09
EWSR1-206ENST00000397938 UHRF1BP1LA0JNW5 1464 aa21.86■■□□□ 1.09
EWSR1-206ENST00000397938 SMC5Q8IY18 1101 aa21.86■■□□□ 1.09
EWSR1-206ENST00000397938 GRPEL1Q9HAV7 217 aa21.86■■□□□ 1.09
EWSR1-206ENST00000397938 DDX19BQ9UMR2 479 aa21.85■■□□□ 1.09
EWSR1-206ENST00000397938 TRIM27P14373 513 aa21.85■■□□□ 1.09
EWSR1-206ENST00000397938 SMC4Q9NTJ3 1288 aa21.85■■□□□ 1.09
EWSR1-206ENST00000397938 PPRC1Q5VV67 1664 aaKnown RBP21.84■■□□□ 1.09
EWSR1-206ENST00000397938 ADGRB1O14514 1584 aa21.84■■□□□ 1.09
EWSR1-206ENST00000397938 U2AF1L5P0DN76 240 aaPredicted RBP21.83■■□□□ 1.09
EWSR1-206ENST00000397938 U2AF1Q01081 240 aaKnown RBP eCLIP21.83■■□□□ 1.091e-11■■□□□ 12
EWSR1-206ENST00000397938 TRAK1Q9UPV9 953 aa21.83■■□□□ 1.09
EWSR1-206ENST00000397938 RBM25P49756 843 aaKnown RBP21.83■■□□□ 1.09
EWSR1-206ENST00000397938 TSR2Q969E8 191 aaKnown RBP21.83■■□□□ 1.09
EWSR1-206ENST00000397938 SNX21Q969T3 373 aa21.83■■□□□ 1.08
EWSR1-206ENST00000397938 NSD2O96028 1365 aa21.82■■□□□ 1.08
EWSR1-206ENST00000397938 FANCAO15360 1455 aa21.82■■□□□ 1.08
EWSR1-206ENST00000397938 ITPRIPQ8IWB1 547 aa21.82■■□□□ 1.08
EWSR1-206ENST00000397938 EXOSC9Q06265 439 aaKnown RBP21.81■■□□□ 1.08
EWSR1-206ENST00000397938 ATF7IPQ6VMQ6 1270 aa21.81■■□□□ 1.08
EWSR1-206ENST00000397938 PPLO60437 1756 aa21.81■■□□□ 1.08
EWSR1-206ENST00000397938 ABCA9Q8IUA7 1624 aa21.8■■□□□ 1.08
EWSR1-206ENST00000397938 SSH1Q8WYL5 1049 aa21.8■■□□□ 1.08
EWSR1-206ENST00000397938 CD109Q6YHK3 1445 aa21.79■■□□□ 1.08
EWSR1-206ENST00000397938 C14orf93Q9H972 538 aaKnown RBP21.79■■□□□ 1.08
EWSR1-206ENST00000397938 CIZ1Q9ULV3 898 aaPredicted RBP21.79■■□□□ 1.08
EWSR1-206ENST00000397938 LMTK2Q8IWU2 1503 aa21.78■■□□□ 1.08
EWSR1-206ENST00000397938 ANKRD36BQ8N2N9 1353 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms