RNA–Protein interactions for RNA: ENST00000397495.8

PPM1F-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 2 BASIC

Gene PPM1F, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-202ENST00000397495 CPS1P31327 1500 aa21.01■□□□□ 0.95
PPM1F-202ENST00000397495 MINK1Q8N4C8 1332 aaPredicted RBP21.01■□□□□ 0.95
PPM1F-202ENST00000397495 TECPR2O15040 1411 aa21.01■□□□□ 0.95
PPM1F-202ENST00000397495 AMOTL2Q9Y2J4 779 aa21■□□□□ 0.95
PPM1F-202ENST00000397495 TULP4Q9NRJ4 1543 aa20.99■□□□□ 0.95
PPM1F-202ENST00000397495 ROBO2Q9HCK4 1378 aa20.98■□□□□ 0.95
PPM1F-202ENST00000397495 EVC2Q86UK5 1308 aa20.98■□□□□ 0.95
PPM1F-202ENST00000397495 FAM135BQ49AJ0 1406 aa20.97■□□□□ 0.95
PPM1F-202ENST00000397495 MYOM1P52179 1685 aa20.96■□□□□ 0.95
PPM1F-202ENST00000397495 KTN1Q86UP2 1357 aaKnown RBP20.96■□□□□ 0.95
PPM1F-202ENST00000397495 SIRT1Q96EB6 747 aa20.96■□□□□ 0.95
PPM1F-202ENST00000397495 PELP1Q8IZL8 1130 aaKnown RBP20.95■□□□□ 0.94
PPM1F-202ENST00000397495 CHD2O14647 1828 aaKnown RBP20.95■□□□□ 0.94
PPM1F-202ENST00000397495 XRN1Q8IZH2 1706 aaKnown RBP20.95■□□□□ 0.94
PPM1F-202ENST00000397495 PIK3R4Q99570 1358 aa20.95■□□□□ 0.94
PPM1F-202ENST00000397495 CABP2Q9NPB3 220 aa20.93■□□□□ 0.94
PPM1F-202ENST00000397495 SRPK2P78362 688 aaKnown RBP20.92■□□□□ 0.94
PPM1F-202ENST00000397495 PANK3Q9H999 370 aa20.92■□□□□ 0.94
PPM1F-202ENST00000397495 KCNA6P17658 529 aa20.92■□□□□ 0.94
PPM1F-202ENST00000397495 PTCH1Q13635 1447 aa20.91■□□□□ 0.94
PPM1F-202ENST00000397495 CCDC184Q52MB2 194 aa20.9■□□□□ 0.94
PPM1F-202ENST00000397495 CDK19Q9BWU1 502 aa20.9■□□□□ 0.94
PPM1F-202ENST00000397495 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.9■□□□□ 0.94
PPM1F-202ENST00000397495 CNGB1Q14028 1251 aaPredicted RBP20.9■□□□□ 0.94
PPM1F-202ENST00000397495 TMC1Q8TDI8 760 aa20.89■□□□□ 0.93
PPM1F-202ENST00000397495 STRCQ7RTU9 1775 aa20.88■□□□□ 0.93
PPM1F-202ENST00000397495 PUS7Q96PZ0 661 aaKnown RBP20.88■□□□□ 0.93
PPM1F-202ENST00000397495 MRS2Q9HD23 443 aa20.87■□□□□ 0.93
PPM1F-202ENST00000397495 WASLO00401 505 aaPredicted RBP20.86■□□□□ 0.93
PPM1F-202ENST00000397495 SLC12A5Q9H2X9 1139 aa20.86■□□□□ 0.93
PPM1F-202ENST00000397495 SUPT16HQ9Y5B9 1047 aaKnown RBP20.86■□□□□ 0.93
PPM1F-202ENST00000397495 PER1O15534 1290 aaPredicted RBP20.85■□□□□ 0.93
PPM1F-202ENST00000397495 RALBP1Q15311 655 aa20.84■□□□□ 0.93
PPM1F-202ENST00000397495 ADGRB2O60241 1585 aa20.83■□□□□ 0.93
PPM1F-202ENST00000397495 ATAD2Q6PL18 1390 aa20.83■□□□□ 0.93
PPM1F-202ENST00000397495 HNRNPUQ00839 825 aaKnown RBP eCLIP20.83■□□□□ 0.93
PPM1F-202ENST00000397495 RBM33Q96EV2 1170 aaKnown RBP20.82■□□□□ 0.92
PPM1F-202ENST00000397495 NWD1Q149M9 1564 aa20.81■□□□□ 0.92
PPM1F-202ENST00000397495 KNSTRNQ9Y448 316 aa20.8■□□□□ 0.92
PPM1F-202ENST00000397495 DMRT2Q9Y5R5 561 aa20.79■□□□□ 0.92
PPM1F-202ENST00000397495 ZBED9Q6R2W3 1325 aa20.78■□□□□ 0.92
PPM1F-202ENST00000397495 BRD4O60885 1362 aaPredicted RBP20.78■□□□□ 0.92
PPM1F-202ENST00000397495 PARD3Q8TEW0 1356 aa20.78■□□□□ 0.92
PPM1F-202ENST00000397495 CARD14Q9BXL6 1004 aa20.78■□□□□ 0.92
PPM1F-202ENST00000397495 NALCNQ8IZF0 1738 aa20.78■□□□□ 0.92
PPM1F-202ENST00000397495 NINLQ9Y2I6 1382 aa20.77■□□□□ 0.92
PPM1F-202ENST00000397495 NUTM2FA1L443 756 aa20.77■□□□□ 0.92
PPM1F-202ENST00000397495 NUDT16Q96DE0 195 aaKnown RBP20.77■□□□□ 0.92
PPM1F-202ENST00000397495 CABP1Q9NZU7 370 aa20.77■□□□□ 0.92
PPM1F-202ENST00000397495 STRCP1A6NGW2 1772 aa20.77■□□□□ 0.92
PPM1F-202ENST00000397495 CC2D1BQ5T0F9 858 aaKnown RBP20.77■□□□□ 0.91
PPM1F-202ENST00000397495 MYBBP1AQ9BQG0 1328 aaKnown RBP20.76■□□□□ 0.91
PPM1F-202ENST00000397495 ANKRD36BQ8N2N9 1353 aa20.75■□□□□ 0.91
PPM1F-202ENST00000397495 PROSER2Q86WR7 435 aaPredicted RBP20.75■□□□□ 0.91
PPM1F-202ENST00000397495 PRR36Q9H6K5 1346 aa20.75■□□□□ 0.91
PPM1F-202ENST00000397495 ATP7BP35670 1465 aa20.74■□□□□ 0.91
PPM1F-202ENST00000397495 PPIP5K1Q6PFW1 1433 aa20.74■□□□□ 0.91
PPM1F-202ENST00000397495 FAM9BQ8IZU0 186 aa20.74■□□□□ 0.91
PPM1F-202ENST00000397495 PNISRQ8TF01 805 aaKnown RBP20.74■□□□□ 0.91
PPM1F-202ENST00000397495 A0A1W2PP64 1363 aa20.73■□□□□ 0.91
PPM1F-202ENST00000397495 NSD3Q9BZ95 1437 aa20.73■□□□□ 0.91
PPM1F-202ENST00000397495 NKTRP30414 1462 aaKnown RBP20.73■□□□□ 0.91
PPM1F-202ENST00000397495 C14orf37Q86TY3 774 aa20.73■□□□□ 0.91
PPM1F-202ENST00000397495 TERF2IPQ9NYB0 399 aa20.73■□□□□ 0.91
PPM1F-202ENST00000397495 CCDC61Q9Y6R9 512 aa20.73■□□□□ 0.91
PPM1F-202ENST00000397495 CD163L1Q9NR16 1453 aa20.73■□□□□ 0.91
PPM1F-202ENST00000397495 AMER1Q5JTC6 1135 aaPredicted RBP20.72■□□□□ 0.91
PPM1F-202ENST00000397495 RGPD8O14715 1765 aaPredicted RBP20.72■□□□□ 0.91
PPM1F-202ENST00000397495 USP32Q8NFA0 1604 aa20.71■□□□□ 0.91
PPM1F-202ENST00000397495 HDGFL2Q7Z4V5 671 aaPredicted RBP20.71■□□□□ 0.91
PPM1F-202ENST00000397495 ADGRL3Q9HAR2 1447 aa20.71■□□□□ 0.91
PPM1F-202ENST00000397495 FMN2Q9NZ56 1722 aa20.71■□□□□ 0.91
PPM1F-202ENST00000397495 TOPAZ1Q8N9V7 1692 aa20.7■□□□□ 0.9
PPM1F-202ENST00000397495 CDC42BPGQ6DT37 1551 aa20.7■□□□□ 0.9
PPM1F-202ENST00000397495 INSRP06213 1382 aa20.69■□□□□ 0.9
PPM1F-202ENST00000397495 ITSN1Q15811 1721 aa20.68■□□□□ 0.9
PPM1F-202ENST00000397495 NLRP13Q86W25 1043 aa20.67■□□□□ 0.9
PPM1F-202ENST00000397495 TMEM94Q12767 1356 aa20.66■□□□□ 0.9
PPM1F-202ENST00000397495 NPC1L1Q9UHC9 1359 aa20.66■□□□□ 0.9
PPM1F-202ENST00000397495 ZNF335Q9H4Z2 1342 aaPredicted RBP20.66■□□□□ 0.9
PPM1F-202ENST00000397495 CGNL1Q0VF96 1302 aa20.65■□□□□ 0.9
PPM1F-202ENST00000397495 AKAP12Q02952 1782 aa20.65■□□□□ 0.9
PPM1F-202ENST00000397495 NEFLP07196 543 aa20.64■□□□□ 0.9
PPM1F-202ENST00000397495 CPSF1Q10570 1443 aaKnown RBP20.64■□□□□ 0.9
PPM1F-202ENST00000397495 ANKARQ7Z5J8 1434 aa20.64■□□□□ 0.9
PPM1F-202ENST00000397495 FKBP8Q14318 412 aa20.63■□□□□ 0.89
PPM1F-202ENST00000397495 PMFBP1Q8TBY8 1022 aa20.63■□□□□ 0.89
PPM1F-202ENST00000397495 PLEKHG3A1L390 1219 aa20.62■□□□□ 0.89
PPM1F-202ENST00000397495 MON2Q7Z3U7 1717 aa20.62■□□□□ 0.89
PPM1F-202ENST00000397495 ACEP12821 1306 aa20.62■□□□□ 0.89
PPM1F-202ENST00000397495 C19orf44Q9H6X5 657 aa20.62■□□□□ 0.89
PPM1F-202ENST00000397495 XIRP1Q702N8 1843 aaKnown RBP20.61■□□□□ 0.89
PPM1F-202ENST00000397495 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.61■□□□□ 0.89
PPM1F-202ENST00000397495 ERICH6BQ5W0A0 696 aa20.6■□□□□ 0.89
PPM1F-202ENST00000397495 KIF20BQ96Q89 1820 aa20.6■□□□□ 0.89
PPM1F-202ENST00000397495 ZNF692Q9BU19 519 aaPredicted RBP20.59■□□□□ 0.89
PPM1F-202ENST00000397495 SMG6Q86US8 1419 aaKnown RBP20.59■□□□□ 0.89
PPM1F-202ENST00000397495 MORC1Q86VD1 984 aa20.59■□□□□ 0.89
PPM1F-202ENST00000397495 EDC4Q6P2E9 1401 aaKnown RBP20.59■□□□□ 0.89
PPM1F-202ENST00000397495 NCOA3Q9Y6Q9 1424 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms