RNA–Protein interactions for RNA: ENST00000397495.8

PPM1F-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 2 BASIC

Gene PPM1F, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-202ENST00000397495 NISCHQ9Y2I1 1504 aa35.06■■■■□ 3.2
PPM1F-202ENST00000397495 CCDC180Q9P1Z9 1646 aa30.72■■■□□ 2.51
PPM1F-202ENST00000397495 ZCCHC6Q5VYS8 1495 aaKnown RBP29.38■■■□□ 2.29
PPM1F-202ENST00000397495 ABCC9O60706 1549 aa29.36■■■□□ 2.29
PPM1F-202ENST00000397495 DCAF8L2P0C7V8 631 aa29.13■■■□□ 2.25
PPM1F-202ENST00000397495 DCAF1Q9Y4B6 1507 aa28.95■■■□□ 2.23
PPM1F-202ENST00000397495 MYO15BQ96JP2 1530 aa28.71■■■□□ 2.19
PPM1F-202ENST00000397495 NACADO15069 1562 aa28.67■■■□□ 2.18
PPM1F-202ENST00000397495 RB1CC1Q8TDY2 1594 aa28.52■■■□□ 2.16
PPM1F-202ENST00000397495 SHROOM4Q9ULL8 1493 aa28.46■■■□□ 2.15
PPM1F-202ENST00000397495 SCRIBQ14160 1630 aa28.25■■■□□ 2.11
PPM1F-202ENST00000397495 UNC13AQ9UPW8 1703 aa27.99■■■□□ 2.07
PPM1F-202ENST00000397495 BICRAQ9NZM4 1560 aa27.66■■■□□ 2.02
PPM1F-202ENST00000397495 PABPN1Q86U42 306 aaKnown RBP eCLIP27.63■■■□□ 2.01
PPM1F-202ENST00000397495 CECR2Q9BXF3 1484 aa27.29■■□□□ 1.96
PPM1F-202ENST00000397495 SUPT5HO00267 1087 aaKnown RBP27.24■■□□□ 1.95
PPM1F-202ENST00000397495 BAZ1AQ9NRL2 1556 aaPredicted RBP27.1■■□□□ 1.93
PPM1F-202ENST00000397495 MROH2BQ7Z745 1585 aa27.1■■□□□ 1.93
PPM1F-202ENST00000397495 RSF1Q96T23 1441 aaPredicted RBP27.08■■□□□ 1.93
PPM1F-202ENST00000397495 SMARCA4P51532 1647 aa27.04■■□□□ 1.92
PPM1F-202ENST00000397495 WIZO95785 1651 aa26.88■■□□□ 1.89
PPM1F-202ENST00000397495 EIF4G1Q04637 1599 aaKnown RBP26.85■■□□□ 1.89
PPM1F-202ENST00000397495 PEG3Q9GZU2 1588 aa26.68■■□□□ 1.86
PPM1F-202ENST00000397495 ATAD2BQ9ULI0 1458 aa26.64■■□□□ 1.86
PPM1F-202ENST00000397495 SMARCA2P51531 1590 aa26.63■■□□□ 1.85
PPM1F-202ENST00000397495 TOP2AP11388 1531 aaKnown RBP26.56■■□□□ 1.84
PPM1F-202ENST00000397495 CC2D2AQ9P2K1 1620 aa26.55■■□□□ 1.84
PPM1F-202ENST00000397495 BAZ1BQ9UIG0 1483 aaKnown RBP26.5■■□□□ 1.83
PPM1F-202ENST00000397495 NCAPD3P42695 1498 aa26.44■■□□□ 1.82
PPM1F-202ENST00000397495 DNAJC5BQ9UF47 199 aa26.42■■□□□ 1.82
PPM1F-202ENST00000397495 HMGXB3Q12766 1538 aa26.39■■□□□ 1.82
PPM1F-202ENST00000397495 CCDC88BA6NC98 1476 aa26.3■■□□□ 1.8
PPM1F-202ENST00000397495 CHIC1Q5VXU3 224 aa25.94■■□□□ 1.74
PPM1F-202ENST00000397495 CFTRP13569 1480 aa25.79■■□□□ 1.72
PPM1F-202ENST00000397495 CADPSQ9ULU8 1353 aa25.76■■□□□ 1.71
PPM1F-202ENST00000397495 PRDM2Q13029 1718 aa25.7■■□□□ 1.7
PPM1F-202ENST00000397495 ABCC8Q09428 1581 aa25.68■■□□□ 1.7
PPM1F-202ENST00000397495 NESP48681 1621 aa25.68■■□□□ 1.7
PPM1F-202ENST00000397495 LAMC3Q9Y6N6 1575 aa25.63■■□□□ 1.69
PPM1F-202ENST00000397495 TRIM41Q8WV44 630 aa25.6■■□□□ 1.69
PPM1F-202ENST00000397495 WRNQ14191 1432 aaPredicted RBP eCLIP25.52■■□□□ 1.68
PPM1F-202ENST00000397495 FANCD2Q9BXW9 1451 aa25.5■■□□□ 1.67
PPM1F-202ENST00000397495 SYNJ1O43426 1573 aa25.44■■□□□ 1.66
PPM1F-202ENST00000397495 PDS5BQ9NTI5 1447 aa25.43■■□□□ 1.66
PPM1F-202ENST00000397495 KIF21AQ7Z4S6 1674 aa25.39■■□□□ 1.65
PPM1F-202ENST00000397495 CEP164Q9UPV0 1460 aa25.37■■□□□ 1.65
PPM1F-202ENST00000397495 CUX1P39880 1505 aa25.35■■□□□ 1.65
PPM1F-202ENST00000397495 TOP2BQ02880 1626 aa25.35■■□□□ 1.65
PPM1F-202ENST00000397495 BIVM-ERCC5R4GMW8 1640 aa25.33■■□□□ 1.65
PPM1F-202ENST00000397495 ERCC6Q03468 1493 aa25.24■■□□□ 1.63
PPM1F-202ENST00000397495 DNMBPQ6XZF7 1577 aa25.21■■□□□ 1.63
PPM1F-202ENST00000397495 URB2Q14146 1524 aaKnown RBP25.2■■□□□ 1.62
PPM1F-202ENST00000397495 TOPBP1Q92547 1522 aa25.19■■□□□ 1.62
PPM1F-202ENST00000397495 FAM9AQ8IZU1 332 aaPredicted RBP25.17■■□□□ 1.62
PPM1F-202ENST00000397495 FGD5Q6ZNL6 1462 aa25.13■■□□□ 1.61
PPM1F-202ENST00000397495 MRC2Q9UBG0 1479 aa25.12■■□□□ 1.61
PPM1F-202ENST00000397495 SOGA1O94964 1423 aa25.12■■□□□ 1.61
PPM1F-202ENST00000397495 RUSC2Q8N2Y8 1516 aa25.05■■□□□ 1.6
PPM1F-202ENST00000397495 POLA1P09884 1462 aaPredicted RBP25.04■■□□□ 1.6
PPM1F-202ENST00000397495 THOC2Q8NI27 1593 aaKnown RBP25.01■■□□□ 1.59
PPM1F-202ENST00000397495 WDR62O43379 1518 aa25■■□□□ 1.59
PPM1F-202ENST00000397495 RAD54L2Q9Y4B4 1467 aa24.98■■□□□ 1.59
PPM1F-202ENST00000397495 EEA1Q15075 1411 aa24.96■■□□□ 1.59
PPM1F-202ENST00000397495 LOC105371045A0A1W2PR82 267 aa24.91■■□□□ 1.58
PPM1F-202ENST00000397495 CUX2O14529 1486 aa24.91■■□□□ 1.58
PPM1F-202ENST00000397495 KIF27Q86VH2 1401 aa24.89■■□□□ 1.58
PPM1F-202ENST00000397495 CSRNP3Q8WYN3 585 aa24.88■■□□□ 1.57
PPM1F-202ENST00000397495 ABCA10Q8WWZ4 1543 aa24.88■■□□□ 1.57
PPM1F-202ENST00000397495 EHMT2Q96KQ7 1210 aa24.87■■□□□ 1.57
PPM1F-202ENST00000397495 WDR97A6NE52 1622 aa24.85■■□□□ 1.57
PPM1F-202ENST00000397495 TARBP1Q13395 1621 aaKnown RBP24.84■■□□□ 1.57
PPM1F-202ENST00000397495 IFT140Q96RY7 1462 aa24.76■■□□□ 1.55
PPM1F-202ENST00000397495 TDRD9Q8NDG6 1382 aaKnown RBP24.76■■□□□ 1.55
PPM1F-202ENST00000397495 ABCA5Q8WWZ7 1642 aa24.72■■□□□ 1.55
PPM1F-202ENST00000397495 IGF1RP08069 1367 aa24.69■■□□□ 1.54
PPM1F-202ENST00000397495 GAPVD1Q14C86 1478 aa24.68■■□□□ 1.54
PPM1F-202ENST00000397495 KIF21BO75037 1637 aa24.68■■□□□ 1.54
PPM1F-202ENST00000397495 ZNF608Q9ULD9 1512 aaPredicted RBP24.66■■□□□ 1.54
PPM1F-202ENST00000397495 AQRO60306 1485 aaKnown RBP eCLIP24.66■■□□□ 1.541e-6■■■■■ 28.7
PPM1F-202ENST00000397495 GOLGA3Q08378 1498 aa24.63■■□□□ 1.53
PPM1F-202ENST00000397495 PRXQ9BXM0 1461 aa24.63■■□□□ 1.53
PPM1F-202ENST00000397495 RAPGEF2Q9Y4G8 1499 aa24.61■■□□□ 1.53
PPM1F-202ENST00000397495 PBRM1Q86U86 1689 aa24.6■■□□□ 1.53
PPM1F-202ENST00000397495 EIF4G3O43432 1585 aaKnown RBP24.59■■□□□ 1.53
PPM1F-202ENST00000397495 ERICH3Q5RHP9 1530 aa24.58■■□□□ 1.53
PPM1F-202ENST00000397495 UBTFP17480 764 aaKnown RBP24.57■■□□□ 1.52
PPM1F-202ENST00000397495 CARMIL1Q5VZK9 1371 aa24.57■■□□□ 1.52
PPM1F-202ENST00000397495 CUL7Q14999 1698 aa24.55■■□□□ 1.52
PPM1F-202ENST00000397495 GRIN2BQ13224 1484 aa24.53■■□□□ 1.52
PPM1F-202ENST00000397495 TNIKQ9UKE5 1360 aa24.48■■□□□ 1.51
PPM1F-202ENST00000397495 ADAMTS12P58397 1594 aa24.42■■□□□ 1.5
PPM1F-202ENST00000397495 SNAPC4Q5SXM2 1469 aa24.41■■□□□ 1.5
PPM1F-202ENST00000397495 FHAD1B1AJZ9 1412 aa24.4■■□□□ 1.5
PPM1F-202ENST00000397495 CEP162Q5TB80 1403 aa24.35■■□□□ 1.49
PPM1F-202ENST00000397495 MAGI1Q96QZ7 1491 aaPredicted RBP24.35■■□□□ 1.49
PPM1F-202ENST00000397495 RANGAP1P46060 587 aaPredicted RBP24.31■■□□□ 1.48
PPM1F-202ENST00000397495 CTTNBP2Q8WZ74 1663 aa24.27■■□□□ 1.48
PPM1F-202ENST00000397495 SYNJ2O15056 1496 aa24.26■■□□□ 1.47
PPM1F-202ENST00000397495 FBLN2P98095 1184 aa24.25■■□□□ 1.47
PPM1F-202ENST00000397495 PCGF6Q9BYE7 350 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms