RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 CHD2O14647 1828 aaKnown RBP38.07■■■■□ 3.69
CPNE1-203ENST00000397442 MINK1Q8N4C8 1332 aaPredicted RBP38.06■■■■□ 3.68
CPNE1-203ENST00000397442 PTCH1Q13635 1447 aa38.06■■■■□ 3.68
CPNE1-203ENST00000397442 MYOM1P52179 1685 aa38.05■■■■□ 3.68
CPNE1-203ENST00000397442 EVC2Q86UK5 1308 aa38.04■■■■□ 3.68
CPNE1-203ENST00000397442 MIER1Q8N108 512 aa38.03■■■■□ 3.68
CPNE1-203ENST00000397442 STRCQ7RTU9 1775 aa38■■■■□ 3.67
CPNE1-203ENST00000397442 PUS7Q96PZ0 661 aaKnown RBP38■■■■□ 3.67
CPNE1-203ENST00000397442 KCNA6P17658 529 aa37.98■■■■□ 3.67
CPNE1-203ENST00000397442 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.97■■■■□ 3.67
CPNE1-203ENST00000397442 CABP2Q9NPB3 220 aa37.92■■■■□ 3.66
CPNE1-203ENST00000397442 ADGRB2O60241 1585 aa37.92■■■■□ 3.66
CPNE1-203ENST00000397442 NWD1Q149M9 1564 aa37.92■■■■□ 3.66
CPNE1-203ENST00000397442 CDK19Q9BWU1 502 aa37.9■■■■□ 3.66
CPNE1-203ENST00000397442 PANK3Q9H999 370 aa37.89■■■■□ 3.66
CPNE1-203ENST00000397442 SRPK2P78362 688 aaKnown RBP37.88■■■■□ 3.65
CPNE1-203ENST00000397442 WASLO00401 505 aaPredicted RBP37.86■■■■□ 3.65
CPNE1-203ENST00000397442 PER1O15534 1290 aaPredicted RBP37.86■■■■□ 3.65
CPNE1-203ENST00000397442 ANP32CO43423 234 aa37.84■■■■□ 3.65
CPNE1-203ENST00000397442 ATAD2Q6PL18 1390 aa37.83■■■■□ 3.65
CPNE1-203ENST00000397442 SLC12A5Q9H2X9 1139 aa37.81■■■■□ 3.64
CPNE1-203ENST00000397442 STRCP1A6NGW2 1772 aa37.77■■■■□ 3.64
CPNE1-203ENST00000397442 TMC1Q8TDI8 760 aa37.77■■■■□ 3.64
CPNE1-203ENST00000397442 NINLQ9Y2I6 1382 aa37.76■■■■□ 3.64
CPNE1-203ENST00000397442 NKTRP30414 1462 aaKnown RBP37.75■■■■□ 3.63
CPNE1-203ENST00000397442 NALCNQ8IZF0 1738 aa37.74■■■■□ 3.63
CPNE1-203ENST00000397442 PRKRIP1Q9H875 184 aaPredicted RBP37.73■■■■□ 3.63
CPNE1-203ENST00000397442 CARD14Q9BXL6 1004 aa37.71■■■■□ 3.63
CPNE1-203ENST00000397442 ATP7BP35670 1465 aa37.71■■■■□ 3.63
CPNE1-203ENST00000397442 PRR36Q9H6K5 1346 aa37.69■■■■□ 3.62
CPNE1-203ENST00000397442 RBM33Q96EV2 1170 aaKnown RBP37.69■■■■□ 3.62
CPNE1-203ENST00000397442 ANKRD36BQ8N2N9 1353 aa37.68■■■■□ 3.62
CPNE1-203ENST00000397442 CD163L1Q9NR16 1453 aa37.68■■■■□ 3.62
CPNE1-203ENST00000397442 NUDT16Q96DE0 195 aaKnown RBP37.68■■■■□ 3.62
CPNE1-203ENST00000397442 ADGRL3Q9HAR2 1447 aa37.66■■■■□ 3.62
CPNE1-203ENST00000397442 CABP1Q9NZU7 370 aa37.66■■■■□ 3.62
CPNE1-203ENST00000397442 USP32Q8NFA0 1604 aa37.65■■■■□ 3.62
CPNE1-203ENST00000397442 CDC42BPGQ6DT37 1551 aa37.65■■■■□ 3.62
CPNE1-203ENST00000397442 KNSTRNQ9Y448 316 aa37.65■■■■□ 3.62
CPNE1-203ENST00000397442 TOPAZ1Q8N9V7 1692 aa37.64■■■■□ 3.62
CPNE1-203ENST00000397442 A0A1W2PP64 1363 aa37.63■■■■□ 3.61
CPNE1-203ENST00000397442 AMER1Q5JTC6 1135 aaPredicted RBP37.63■■■■□ 3.61
CPNE1-203ENST00000397442 PROSER2Q86WR7 435 aaPredicted RBP37.63■■■■□ 3.61
CPNE1-203ENST00000397442 CCDC61Q9Y6R9 512 aa37.63■■■■□ 3.61
CPNE1-203ENST00000397442 FMN2Q9NZ56 1722 aa37.62■■■■□ 3.61
CPNE1-203ENST00000397442 PPIP5K1Q6PFW1 1433 aa37.62■■■■□ 3.61
CPNE1-203ENST00000397442 NSD3Q9BZ95 1437 aa37.6■■■■□ 3.61
CPNE1-203ENST00000397442 CNGB1Q14028 1251 aaPredicted RBP37.59■■■■□ 3.61
CPNE1-203ENST00000397442 NPC1L1Q9UHC9 1359 aa37.58■■■■□ 3.61
CPNE1-203ENST00000397442 CCER2I3L3R5 266 aa37.57■■■■□ 3.61
CPNE1-203ENST00000397442 TERF2IPQ9NYB0 399 aa37.57■■■■□ 3.61
CPNE1-203ENST00000397442 KTN1Q86UP2 1357 aaKnown RBP37.57■■■■□ 3.61
CPNE1-203ENST00000397442 NUTM2FA1L443 756 aa37.56■■■■□ 3.6
CPNE1-203ENST00000397442 DMRT2Q9Y5R5 561 aa37.56■■■■□ 3.6
CPNE1-203ENST00000397442 PARD3Q8TEW0 1356 aa37.56■■■■□ 3.6
CPNE1-203ENST00000397442 RGPD8O14715 1765 aaPredicted RBP37.55■■■■□ 3.6
CPNE1-203ENST00000397442 CC2D1BQ5T0F9 858 aaKnown RBP37.55■■■■□ 3.6
CPNE1-203ENST00000397442 ANKARQ7Z5J8 1434 aa37.55■■■■□ 3.6
CPNE1-203ENST00000397442 CPSF1Q10570 1443 aaKnown RBP37.54■■■■□ 3.6
CPNE1-203ENST00000397442 TMEM94Q12767 1356 aa37.54■■■■□ 3.6
CPNE1-203ENST00000397442 ZNF335Q9H4Z2 1342 aaPredicted RBP37.53■■■■□ 3.6
CPNE1-203ENST00000397442 ITSN1Q15811 1721 aa37.53■■■■□ 3.6
CPNE1-203ENST00000397442 NCOA3Q9Y6Q9 1424 aa37.52■■■■□ 3.6
CPNE1-203ENST00000397442 RALBP1Q15311 655 aa37.52■■■■□ 3.6
CPNE1-203ENST00000397442 HDGFL2Q7Z4V5 671 aaPredicted RBP37.51■■■■□ 3.6
CPNE1-203ENST00000397442 PLEKHG3A1L390 1219 aa37.5■■■■□ 3.59
CPNE1-203ENST00000397442 C14orf37Q86TY3 774 aa37.5■■■■□ 3.59
CPNE1-203ENST00000397442 AKAP12Q02952 1782 aa37.49■■■■□ 3.59
CPNE1-203ENST00000397442 XIRP1Q702N8 1843 aaKnown RBP37.48■■■■□ 3.59
CPNE1-203ENST00000397442 MON2Q7Z3U7 1717 aa37.46■■■■□ 3.59
CPNE1-203ENST00000397442 C19orf44Q9H6X5 657 aa37.45■■■■□ 3.59
CPNE1-203ENST00000397442 LRRC7Q96NW7 1537 aa37.45■■■■□ 3.59
CPNE1-203ENST00000397442 CGNL1Q0VF96 1302 aa37.44■■■■□ 3.58
CPNE1-203ENST00000397442 CCDC184Q52MB2 194 aa37.41■■■■□ 3.58
CPNE1-203ENST00000397442 ACEP12821 1306 aa37.41■■■■□ 3.58
CPNE1-203ENST00000397442 MYBBP1AQ9BQG0 1328 aaKnown RBP37.41■■■■□ 3.58
CPNE1-203ENST00000397442 DCCP43146 1447 aa37.39■■■■□ 3.58
CPNE1-203ENST00000397442 EDC4Q6P2E9 1401 aaKnown RBP37.38■■■■□ 3.58
CPNE1-203ENST00000397442 ZNF692Q9BU19 519 aaPredicted RBP37.38■■■■□ 3.57
CPNE1-203ENST00000397442 POLR3AO14802 1390 aaPredicted RBP37.38■■■■□ 3.57
CPNE1-203ENST00000397442 NSD2O96028 1365 aa37.37■■■■□ 3.57
CPNE1-203ENST00000397442 PMFBP1Q8TBY8 1022 aa37.36■■■■□ 3.57
CPNE1-203ENST00000397442 NRKQ7Z2Y5 1582 aa37.35■■■■□ 3.57
CPNE1-203ENST00000397442 KIF20BQ96Q89 1820 aa37.33■■■■□ 3.57
CPNE1-203ENST00000397442 FYB1O15117 783 aa37.33■■■■□ 3.57
CPNE1-203ENST00000397442 USP6P35125 1406 aa37.32■■■■□ 3.57
CPNE1-203ENST00000397442 ANKRD26Q9UPS8 1709 aa37.31■■■■□ 3.56
CPNE1-203ENST00000397442 MSH6P52701 1360 aa37.3■■■■□ 3.56
CPNE1-203ENST00000397442 NLRP13Q86W25 1043 aa37.29■■■■□ 3.56
CPNE1-203ENST00000397442 MST1RQ04912 1400 aa37.29■■■■□ 3.56
CPNE1-203ENST00000397442 SSH2Q76I76 1423 aa37.29■■■■□ 3.56
CPNE1-203ENST00000397442 C1orf167Q5SNV9 1468 aa37.29■■■■□ 3.56
CPNE1-203ENST00000397442 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.28■■■■□ 3.56
CPNE1-203ENST00000397442 MRS2Q9HD23 443 aa37.28■■■■□ 3.56
CPNE1-203ENST00000397442 PHF8Q9UPP1 1060 aa37.28■■■■□ 3.56
CPNE1-203ENST00000397442 ATF3P18847 181 aa37.28■■■■□ 3.56
CPNE1-203ENST00000397442 PPP2R1AP30153 589 aa37.28■■■■□ 3.56
CPNE1-203ENST00000397442 NGDNQ8NEJ9 315 aaKnown RBP37.28■■■■□ 3.56
CPNE1-203ENST00000397442 BRD4O60885 1362 aaPredicted RBP37.28■■■■□ 3.56
CPNE1-203ENST00000397442 GGNBP2Q9H3C7 697 aa37.27■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms